HHsearch alignment for GI: 254780334 and conserved domain: PRK08181

>PRK08181 transposase; Validated.
Probab=98.33  E-value=1.1e-05  Score=61.16  Aligned_cols=159  Identities=19%  Similarity=0.279  Sum_probs=93.9

Q ss_pred             CCEECCCCCCCCCCCCCCCCHHHHHHHCC--CCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHH
Q ss_conf             64031333455666323781248888659--8578708999549875188999999999850398199998646304788
Q gi|254780334|r   57 SLFMLSEESIEEESRIQTHIDELDRVTGG--GFVRGSVILVGGDPGIGKSTLLMQTAASLAYKKHRITYVSGEEAIGQIR  134 (479)
Q Consensus        57 ~~~~l~~~~~~~~~Ri~TGi~eLDrvLGG--Gl~~Gs~~Li~G~PGvGKSTL~Lqia~~~a~~g~~vlYvS~EEs~~Qi~  134 (479)
T Consensus        73 ~~ktLe~fDf~~~p~i~--~~~i~~L~~~~~fi~~~~Nvil~Gp~GtGKThLA~Alg~~A~~~G~~V~f~~~~~L~~~L~  150 (269)
T PRK08181         73 PGKTLDSFDFEAVPMIS--KAQVMALAAGDSWLAKGANLLLFGPPGGGKSHLAAAIGLALIENGWRVLFTRTTDLVQKLQ  150 (269)
T ss_pred             CCCCHHHCCCCCCCCCC--HHHHHHHHCCCHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHH
T ss_conf             98886547855689989--9999999656758864870899899998788999999999998799399978999999999


Q ss_pred             HHHHHCCCCCCCHHEECCCCHHHHHHHHHHCCCCCEEEECHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCEEEE
Q ss_conf             88752015775100003478899999997316982899721687665420445563679999999999975307978999
Q gi|254780334|r  135 LRAQRLNTINSSVYIAIETNVEDIIATLITNEKPDLVIIDSIQTLWSQTAESSPGTVIQVRTSVQAMIQYAKKNGVAMVL  214 (479)
Q Consensus       135 ~Ra~Rl~~~~~~i~~~~e~~l~~il~~~i~~~~~~~vVIDSIQtl~~~~~~s~~GsvsQvre~~~~L~~~AK~~~i~vil  214 (479)
T Consensus       151 ~-a~------------~~~~~~~~~~~l---~~~dLLIiDe~G~~--------~~~~-~~~~~lf~lI~~Rye~~S-~II  204 (269)
T PRK08181        151 V-AR------------RELQLESAIAKL---DKFDLLILDDLAYV--------TKDQ-AETSVLFELISARYERRS-ILI  204 (269)
T ss_pred             H-HH------------HCCCHHHHHHHH---HCCCEEEEHHCCCC--------CCCH-HHHHHHHHHHHHHHCCCC-EEE
T ss_conf             9-77------------558399999997---44460122010566--------7998-999999999999857888-899


Q ss_pred             EEEE-CCC-CC-CCCHHHHHHHHHE------EEEEECC
Q ss_conf             8630-366-54-3311457877530------2785155
Q gi|254780334|r  215 VGHV-TKE-GQ-IAGPRVIEHMVDA------VLYFEGG  243 (479)
Q Consensus       215 ighv-TK~-G~-iAGp~~LeH~VD~------vl~~ege  243 (479)
T Consensus       205 TSn~~~~~W~~~f~D~~la~AiLDRLvH~a~~i~l~Ge  242 (269)
T PRK08181        205 TANQPFGEWNRVFPDPAMTLAAVDRLVHHATIFEMNVE  242 (269)
T ss_pred             ECCCCHHHHHHHCCCHHHHHHHHHHHHCCEEEEEECCC
T ss_conf             88999778877538688999999987015289975587