HHsearch alignment for GI: 254780334 and conserved domain: PRK08760

>PRK08760 replicative DNA helicase; Provisional.
Probab=99.91  E-value=1.4e-22  Score=184.21  Aligned_cols=200  Identities=18%  Similarity=0.249  Sum_probs=145.6

Q ss_pred             CCCCCCCCCHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHH-CCCCCEEEEECCCCHHHHHHHHH--HCCCC-
Q ss_conf             666323781248888659857870899954987518899999999985-03981999986463047888875--20157-
Q gi|254780334|r   68 EESRIQTHIDELDRVTGGGFVRGSVILVGGDPGIGKSTLLMQTAASLA-YKKHRITYVSGEEAIGQIRLRAQ--RLNTI-  143 (479)
Q Consensus        68 ~~~Ri~TGi~eLDrvLGGGl~~Gs~~Li~G~PGvGKSTL~Lqia~~~a-~~g~~vlYvS~EEs~~Qi~~Ra~--Rl~~~-  143 (479)
T Consensus       208 ~~~Gi~TG~~~LD~~t-~Gl~~G~LiViaaRPsmGKTalalnia~~~A~~~~~~V~~fSLEMs~~ql~~Rlls~~s~v~~  286 (476)
T PRK08760        208 NITGLPTGYNDFDAMT-AGLQPTDLIILAARPAMGKTTFALNIAEYAAIKSKKGVAVFSMEMSASQLAMRLISSNGRINA  286 (476)
T ss_pred             CCEECCCCCHHHHHHH-CCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHCCCCH
T ss_conf             9533677968899744-699877779998778874789999999999983799789970369999999999998338976


Q ss_pred             ------------------------CCCHHEECC--CCHHHH---HHHHHHCCCCCEEEECHHHHHHHHHHCCCCCCHHHH
Q ss_conf             ------------------------751000034--788999---999973169828997216876654204455636799
Q gi|254780334|r  144 ------------------------NSSVYIAIE--TNVEDI---IATLITNEKPDLVIIDSIQTLWSQTAESSPGTVIQV  194 (479)
Q Consensus       144 ------------------------~~~i~~~~e--~~l~~i---l~~~i~~~~~~~vVIDSIQtl~~~~~~s~~GsvsQv  194 (479)
T Consensus       287 ~~i~~g~l~~~e~~~~~~a~~~l~~~~l~idD~~~~t~~~ir~~~R~~k~~~~l~lvvIDYLqL~~~~~~--~~~r~~~v  364 (476)
T PRK08760        287 QRLRTGALEDEDWARVTGAIKMLKETKIFIDDTPGVSPEVLRSKCRRLKREHDLGLIVIDYLQLMSVPGN--SENRATEI  364 (476)
T ss_pred             HHHHCCCCCHHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEHHHHCCCCCC--CCCHHHHH
T ss_conf             7776489999999999999999860881685799999999999999998727998799970764158888--74488999


Q ss_pred             HHHHHHHHHHHHHCCCEEEEEEEECCCC-----------CCCCHHHHHHHHHEEEEEECCC-C----CCCCCCEEEEEEE
Q ss_conf             9999999997530797899986303665-----------4331145787753027851555-6----6654421567632
Q gi|254780334|r  195 RTSVQAMIQYAKKNGVAMVLVGHVTKEG-----------QIAGPRVIEHMVDAVLYFEGGT-R----NTQYDYRILRSVK  258 (479)
Q Consensus       195 re~~~~L~~~AK~~~i~vilighvTK~G-----------~iAGp~~LeH~VD~vl~~ege~-~----~~~~~~R~Lr~~K  258 (479)
T Consensus       365 ~~isr~lK~lAkel~vpVi~LsQLnR~~e~R~dkrP~lsDLReSG~IEqdADvV~~l~R~~~y~~~~~~~~~~~e~ivaK  444 (476)
T PRK08760        365 SEISRSLKGLAKELNVPVIALSQLNRSLETRTDKRPVMADLRESGAIEQDADMIVFIYRDDYYNKENSPDKGLAEIIIGK  444 (476)
T ss_pred             HHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCEEEEECCHHHCCCCCCCCCCEEEEEEEC
T ss_conf             99999999999997997899631576634479999860011254420320868999624532387679888807999974


Q ss_pred             ECCCCCCCEEEE
Q ss_conf             025676512799
Q gi|254780334|r  259 NRFGPTDEIGVF  270 (479)
Q Consensus       259 NRfG~t~e~gvf  270 (479)
T Consensus       445 nR~G~~G~v~l~  456 (476)
T PRK08760        445 HRGGPTGSCKLK  456 (476)
T ss_pred             CCCCCCCEEEEE
T ss_conf             678986269999