HHsearch alignment for GI: 254780334 and conserved domain: PRK09165
>PRK09165 replicative DNA helicase; Provisional.
Probab=99.91 E-value=7.1e-23 Score=186.45 Aligned_cols=202 Identities=20% Similarity=0.300 Sum_probs=145.4
Q ss_pred CCCCCCCCCHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHC---------------CCCCEEEEECCCCHHH
Q ss_conf 6663237812488886598578708999549875188999999999850---------------3981999986463047
Q gi|254780334|r 68 EESRIQTHIDELDRVTGGGFVRGSVILVGGDPGIGKSTLLMQTAASLAY---------------KKHRITYVSGEEAIGQ 132 (479)
Q Consensus 68 ~~~Ri~TGi~eLDrvLGGGl~~Gs~~Li~G~PGvGKSTL~Lqia~~~a~---------------~g~~vlYvS~EEs~~Q 132 (479)
T Consensus 184 ~~~Gi~TGf~~LD~~t-~G~~~GdLiIIAARPsmGKTafaLniA~n~A~~~~~~~~~~~~~~~~~g~~V~~FSLEMs~~q 262 (484)
T PRK09165 184 HLSGISTGLRDLDSKL-GGLHPSDLIILAGRPSMGKTALATNIAFNAAKAYLREAQPDGSKKAVNGGVVGFFSLEMSAEQ 262 (484)
T ss_pred CCCCEECCCHHHHHHH-CCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCHHH
T ss_conf 9773315844599871-588877379996079997789999999999987410222233211368984899947799999
Q ss_pred HHHHHH--HCCCC-------------------------CCCHHEECC--CCHHHHH---HHHHHCCCCCEEEECHHHHHH
Q ss_conf 888875--20157-------------------------751000034--7889999---999731698289972168766
Q gi|254780334|r 133 IRLRAQ--RLNTI-------------------------NSSVYIAIE--TNVEDII---ATLITNEKPDLVIIDSIQTLW 180 (479)
Q Consensus 133 i~~Ra~--Rl~~~-------------------------~~~i~~~~e--~~l~~il---~~~i~~~~~~~vVIDSIQtl~ 180 (479)
T Consensus 263 l~~Rlls~~s~V~~~~ir~g~l~~~e~~~i~~a~~~l~~~~l~IdD~~~~ti~~Ira~~Rr~k~~~gl~livIDYLqLi~ 342 (484)
T PRK09165 263 LATRILSEQSEISSSKIRRGKISEEDFEKLVDASQELQKLPLYIDDTPALSISALRARARRLKRQHGLDLLVIDYLQLIR 342 (484)
T ss_pred HHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCEEEEECHHHCC
T ss_conf 99999999726861355448999999999999999997198489779998799999999999986099889995176357
Q ss_pred HHHHCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCC-----------CCCHHHHHHHHHEEEEEECCC-C---
Q ss_conf 5420445563679999999999975307978999863036654-----------331145787753027851555-6---
Q gi|254780334|r 181 SQTAESSPGTVIQVRTSVQAMIQYAKKNGVAMVLVGHVTKEGQ-----------IAGPRVIEHMVDAVLYFEGGT-R--- 245 (479)
Q Consensus 181 ~~~~~s~~GsvsQvre~~~~L~~~AK~~~i~vilighvTK~G~-----------iAGp~~LeH~VD~vl~~ege~-~--- 245 (479)
T Consensus 343 ~~~~~~~~~R~~ev~~Isr~LK~lAkel~ipVi~LsQLnR~~E~R~dkrP~lsDLReSGsIEQDADvV~flyR~~yY~~~ 422 (484)
T PRK09165 343 GSSKRSQDNRVQEISEITQGLKALAKELNIPVIALSQLSRQVEQRDDKRPQLSDLRESGSIEQDADVVMFVYREEYYLKR 422 (484)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCEEEEECCHHHHCCC
T ss_conf 88888612199999999999999999969969997457844234799997600103555202207789996447661344
Q ss_pred -C-C-C--------------CCCEEEEEEEECCCCCCCEEEE
Q ss_conf -6-6-5--------------4421567632025676512799
Q gi|254780334|r 246 -N-T-Q--------------YDYRILRSVKNRFGPTDEIGVF 270 (479)
Q Consensus 246 -~-~-~--------------~~~R~Lr~~KNRfG~t~e~gvf 270 (479)
T Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~~elivaKnRnG~~G~v~l~ 464 (484)
T PRK09165 423 KEPREGTPKHEEWQEKMEKVHNKAEVIIAKQRHGPTGTVKLH 464 (484)
T ss_pred CCCCCCCCCHHHHHHHCCCCCCCEEEEEECCCCCCCEEEEEE
T ss_conf 587767520122321012458807999963788986069999