HHsearch alignment for GI: 254780334 and conserved domain: PRK09361

Probab=100.00  E-value=2.8e-43  Score=335.25  Aligned_cols=207  Identities=25%  Similarity=0.410  Sum_probs=170.6

Q ss_pred             CCCCCCCCHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEECC----CCHHHHHHHHHHCCCCC
Q ss_conf             66323781248888659857870899954987518899999999985039819999864----63047888875201577
Q gi|254780334|r   69 ESRIQTHIDELDRVTGGGFVRGSVILVGGDPGIGKSTLLMQTAASLAYKKHRITYVSGE----EAIGQIRLRAQRLNTIN  144 (479)
Q Consensus        69 ~~Ri~TGi~eLDrvLGGGl~~Gs~~Li~G~PGvGKSTL~Lqia~~~a~~g~~vlYvS~E----Es~~Qi~~Ra~Rl~~~~  144 (479)
T Consensus         2 ~erisTG~~~lD~~LgGGi~~G~itei~G~pG~GKTtl~lq~a~~~~~~g~~vlYidtE~~~~er~~qi~~--~~~~~~~   79 (224)
T PRK09361          2 EELLPTGCKSLDELLGGGIERGTITQIYGPPGSGKTNICIQLAVEAARQGKKVIYIDTEGLSPERFKQIAG--EDFEELL   79 (224)
T ss_pred             CCEECCCCHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHC--CCHHHHH
T ss_conf             85303797899986269988887999989999859999999999999749909996787678899999856--5734542


Q ss_pred             CCHHEECCCCHHHHHHH-----HHHCCCCCEEEECHHHHHHHHHHCCCCCC--HHHHHHHHHHHHHHHHHCCCEEEEEEE
Q ss_conf             51000034788999999-----97316982899721687665420445563--679999999999975307978999863
Q gi|254780334|r  145 SSVYIAIETNVEDIIAT-----LITNEKPDLVIIDSIQTLWSQTAESSPGT--VIQVRTSVQAMIQYAKKNGVAMVLVGH  217 (479)
Q Consensus       145 ~~i~~~~e~~l~~il~~-----~i~~~~~~~vVIDSIQtl~~~~~~s~~Gs--vsQvre~~~~L~~~AK~~~i~viligh  217 (479)
T Consensus        80 ~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~lvVIDSi~~~~~~e~~~~~~~~~~~~l~~~~~~L~~~a~~~~~~vvl~nq  159 (224)
T PRK09361         80 SNIIIFEPSSFEEQREAIQKAEKIAKENVGLIVLDSATSLYRLELDDNDNSKLNRELGKQISHLLSLARKHNIAVVITNQ  159 (224)
T ss_pred             HCCEEECCCCHHHHHHHHHHHHHHHHCCCCEEEEECCHHHEEHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEE
T ss_conf             06147247988999999999998750587389996230100000145765899999999999999999971986999966


Q ss_pred             ECCCCC-----CCCHHHHHHHHHEEEEEECCCCCCCCCCEEEEEEEECCCCCCCEEEEEECCCCCEEEC
Q ss_conf             036654-----3311457877530278515556665442156763202567651279985156631101
Q gi|254780334|r  218 VTKEGQ-----IAGPRVIEHMVDAVLYFEGGTRNTQYDYRILRSVKNRFGPTDEIGVFEMSDKGLQEVS  281 (479)
Q Consensus       218 vTK~G~-----iAGp~~LeH~VD~vl~~ege~~~~~~~~R~Lr~~KNRfG~t~e~gvf~m~~~Gl~~v~  281 (479)
T Consensus       160 V~~~~~~~~~~paGg~~l~h~~d~~l~le~~---~-~~~R~l~v~Knr~~p~~~~~~f~it~~Gi~~v~  224 (224)
T PRK09361        160 VYSDIDSDGLRPLGGHTLEHWSKAILRLEKL---R-NGKRRATLEKHRSRPEGESAEFRITDRGIEDVD  224 (224)
T ss_pred             EEECCCCCCCCCCCCCCEEEEEEEEEEEEEC---C-CCEEEEEEEECCCCCCCCEEEEEECCCCCCCCC
T ss_conf             8852676544446541222105799999625---8-977999997589899996799998689864579