HHsearch alignment for GI: 254780334 and conserved domain: PRK09452
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed.
Probab=97.26 E-value=0.0016 Score=45.29 Aligned_cols=129 Identities=18% Similarity=0.261 Sum_probs=65.9
Q ss_pred CHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCHHEEC----
Q ss_conf 1248888659857870899954987518899999999985039819999864630478888752015775100003----
Q gi|254780334|r 76 IDELDRVTGGGFVRGSVILVGGDPGIGKSTLLMQTAASLAYKKHRITYVSGEEAIGQIRLRAQRLNTINSSVYIAI---- 151 (479)
Q Consensus 76 i~eLDrvLGGGl~~Gs~~Li~G~PGvGKSTL~Lqia~~~a~~g~~vlYvS~EEs~~Qi~~Ra~Rl~~~~~~i~~~~---- 151 (479)
T Consensus 30 ~~aL~~v-sl~I~~GE~~~llGpSGsGKSTLlr~iaGl~~p~sG-~I~~~G~~v~~-~~~~~R~ig~VfQ~~aLfp~lTV 106 (378)
T PRK09452 30 KEVISNL-DLTINNGEFLTLLGPSGCGKTTVLRLIAGFETPDSG-RIMLDGQDITH-VPAENRYVNTVFQSYALFPHMTV 106 (378)
T ss_pred EEEEECC-EEEECCCCEEEEECCCCCHHHHHHHHHHCCCCCCCE-EEEECCEECCC-CCHHHCCEEEEECCCCCCCCCCH
T ss_conf 9999362-779999989999989997699999999769999846-99999999898-99789885899227643789869
Q ss_pred ---------------------------CCCHHHH-----------------HHHHHHCCCCCEEEECHHHHHHHHHHCCC
Q ss_conf ---------------------------4788999-----------------99997316982899721687665420445
Q gi|254780334|r 152 ---------------------------ETNVEDI-----------------IATLITNEKPDLVIIDSIQTLWSQTAESS 187 (479)
Q Consensus 152 ---------------------------e~~l~~i-----------------l~~~i~~~~~~~vVIDSIQtl~~~~~~s~ 187 (479)
T Consensus 107 ~eNv~~~l~~~~~~~~e~~~rv~e~L~~v~L~~~~~r~p~~LSGGqqQRVaiARAL-~~~P~vLLLDEPts----~LD~- 180 (378)
T PRK09452 107 FENVAFGLRMQKTPAAEITPRVMEALRMVQLEEFAQRKPHQLSGGQQQRVAIARAV-VNKPKVLLLDESLS----ALDY- 180 (378)
T ss_pred HHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHCCCCCCCHHHHHHHHHHHHH-CCCCCEEEECCCCC----CCCH-
T ss_conf 99999899765998799999999998750734354368354998899999999986-23998999578644----4799-
Q ss_pred CCCHHHHHHHHHHHHHHHHHCCCEEEEEEE
Q ss_conf 563679999999999975307978999863
Q gi|254780334|r 188 PGTVIQVRTSVQAMIQYAKKNGVAMVLVGH 217 (479)
Q Consensus 188 ~GsvsQvre~~~~L~~~AK~~~i~viligh 217 (479)
T Consensus 181 ----~~r~~~~~~l~~l~~~~g~T~i~VTH 206 (378)
T PRK09452 181 ----KLRKQMQNELKALQRKLGITFVFVTH 206 (378)
T ss_pred ----HHHHHHHHHHHHHHHHHCCEEEEECC
T ss_conf ----99999999999999984998999988