HHsearch alignment for GI: 254780334 and conserved domain: PRK10418
>PRK10418 nikD nickel transporter ATP-binding protein; Provisional.
Probab=97.70 E-value=0.00051 Score=48.88 Aligned_cols=136 Identities=22% Similarity=0.255 Sum_probs=74.1
Q ss_pred CCCCCCEEEEECCCCCCHHHHHHHHHHHHHC----CCCCEEEEECCCCHHHHHHHHHHCCCCCCCH--------------
Q ss_conf 8578708999549875188999999999850----3981999986463047888875201577510--------------
Q gi|254780334|r 86 GFVRGSVILVGGDPGIGKSTLLMQTAASLAY----KKHRITYVSGEEAIGQIRLRAQRLNTINSSV-------------- 147 (479)
Q Consensus 86 Gl~~Gs~~Li~G~PGvGKSTL~Lqia~~~a~----~g~~vlYvS~EEs~~Qi~~Ra~Rl~~~~~~i-------------- 147 (479)
T Consensus 25 ~v~~Ge~~aiiG~SGsGKStl~k~llgll~~~~~~~~G~-i~~dg~~~~~-~~~r~r~i~~v~Q~p~~~~~p~~~v~~~~ 102 (254)
T PRK10418 25 TLQRGRVLALVGGSGSGKSLTCAAALGILPAGVRQTAGR-VLADGKPVAP-CALRGRKIATIMQNPRSAFNPLHTMHTHA 102 (254)
T ss_pred EECCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCEECCE-EEECCEECCH-HHHCCCCEEEEEECCHHHCCHHHHHHHHH
T ss_conf 898999999999998789999999957998898415789-9999999960-34305508999837522137688999999
Q ss_pred --------------H---E---ECCCCHHH-----------------HHHHHHHCCCCCEEEECHHHHHHHHHHCCCCCC
Q ss_conf --------------0---0---03478899-----------------999997316982899721687665420445563
Q gi|254780334|r 148 --------------Y---I---AIETNVED-----------------IIATLITNEKPDLVIIDSIQTLWSQTAESSPGT 190 (479)
Q Consensus 148 --------------~---~---~~e~~l~~-----------------il~~~i~~~~~~~vVIDSIQtl~~~~~~s~~Gs 190 (479)
T Consensus 103 ~~~~~~~~~~~~~~~~~~~l~~vgL~~~~~~l~~~P~qLSGGq~QRvaiArA-L~~~P~lLilDEPTs----~LD~---- 173 (254)
T PRK10418 103 RETCLALGKPADDATLTAAIEAVGLENAARVLKLYPFEMSGGMLQRMMIALA-LLCEAPFIIADEPTT----DLDV---- 173 (254)
T ss_pred HHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHCHHHCCHHHHHHHHHHHH-HHCCCCEEEECCCCC----CCCH----
T ss_conf 9999865820599999999998399986887641926348799999999999-854999898558754----3799----
Q ss_pred HHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCHHHHHHHHHEEEEEE
Q ss_conf 679999999999975307978999863036654331145787753027851
Q gi|254780334|r 191 VIQVRTSVQAMIQYAKKNGVAMVLVGHVTKEGQIAGPRVIEHMVDAVLYFE 241 (479)
Q Consensus 191 vsQvre~~~~L~~~AK~~~i~vilighvTK~G~iAGp~~LeH~VD~vl~~e 241 (479)
T Consensus 174 ~~-~~~il~ll~~l~~~~g~tii~vTHD--------l~~a~~~aDri~Vm~ 215 (254)
T PRK10418 174 VA-QARILDLLESIVQKRALGMLLVTHD--------MGVVARLADDVAVMS 215 (254)
T ss_pred HH-HHHHHHHHHHHHHHHCCEEEEEECC--------HHHHHHHCCEEEEEE
T ss_conf 99-9999999999999709979999699--------999999689999998