HHsearch alignment for GI: 254780334 and conserved domain: PRK12597
>PRK12597 F0F1 ATP synthase subunit beta; Provisional.
Probab=97.52 E-value=0.008 Score=40.15 Aligned_cols=108 Identities=18% Similarity=0.294 Sum_probs=66.2
Q ss_pred CCCCCCCCHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCC-CCCEEEEE-CCCCHH--HHHHHHHHCCCCC
Q ss_conf 6632378124888865985787089995498751889999999998503-98199998-646304--7888875201577
Q gi|254780334|r 69 ESRIQTHIDELDRVTGGGFVRGSVILVGGDPGIGKSTLLMQTAASLAYK-KHRITYVS-GEEAIG--QIRLRAQRLNTIN 144 (479)
Q Consensus 69 ~~Ri~TGi~eLDrvLGGGl~~Gs~~Li~G~PGvGKSTL~Lqia~~~a~~-g~~vlYvS-~EEs~~--Qi~~Ra~Rl~~~~ 144 (479)
T Consensus 122 ~e~l~TGIkaID~l~--pigrGqrigIfggaGvGKTvL~~~ii~n~~~~~~~v~V~~~iGER~rEv~e~~~el~~~g~l~ 199 (459)
T PRK12597 122 TELLETGIKVIDLLC--PIAKGGKTGLFGGAGVGKTVLMMELIFNISKRHQGSSVFAGVGERSREGHELYLEMKESGVLD 199 (459)
T ss_pred CCCCCCCHHHHHCCC--CCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHCCCCC
T ss_conf 872003805554126--635787777436899982157899999877551783688862454688999999986368752
Q ss_pred CCHHEECCCCH---H---------HHHHHHH-HCCCCCEEEECHHHH
Q ss_conf 51000034788---9---------9999997-316982899721687
Q gi|254780334|r 145 SSVYIAIETNV---E---------DIIATLI-TNEKPDLVIIDSIQT 178 (479)
Q Consensus 145 ~~i~~~~e~~l---~---------~il~~~i-~~~~~~~vVIDSIQt 178 (479)
T Consensus 200 ~tvvV~~~~depp~~R~~~~~~a~tiAEyFrD~~g~dVLl~~D~ltR 246 (459)
T PRK12597 200 KTVMVYGQMNEPPGARMRVVLTGLTAAEYFRDEEKEDVLLFIDNIFR 246 (459)
T ss_pred EEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHH
T ss_conf 48999806889999998777788899999986379978999557689