HHsearch alignment for GI: 254780334 and conserved domain: PRK13646
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional.
Probab=97.68 E-value=0.00085 Score=47.23 Aligned_cols=137 Identities=20% Similarity=0.319 Sum_probs=73.7
Q ss_pred CCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEECCC----CHHH-HHHHHHHCCCCCC--CHHEECCC-----
Q ss_conf 8578708999549875188999999999850398199998646----3047-8888752015775--10000347-----
Q gi|254780334|r 86 GFVRGSVILVGGDPGIGKSTLLMQTAASLAYKKHRITYVSGEE----AIGQ-IRLRAQRLNTINS--SVYIAIET----- 153 (479)
Q Consensus 86 Gl~~Gs~~Li~G~PGvGKSTL~Lqia~~~a~~g~~vlYvS~EE----s~~Q-i~~Ra~Rl~~~~~--~i~~~~e~----- 153 (479)
T Consensus 29 ~I~~Ge~~aiiG~nGsGKSTLl~~l~GLl~p~~G~I-~~~g~~i~~~~~~~~~~~~r~~ig~VfQ~P~~ql~~~tV~~~i 107 (286)
T PRK13646 29 EFEQGKYYAIVGQTGSGKSTLIQNINALLKPTTGTV-TVDDITITHKTKDKYIRPVRKRIGMVFQFPESQLFEDTVEREM 107 (286)
T ss_pred EECCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCEE-EECCEECCCCCHHHHHHHHHHCEEEEEECCHHHHHHHHHHHHH
T ss_conf 986998999999999819999999970788888759-9998987555746789998740899998840222077899999
Q ss_pred ---------CHHH----------------------------------HHHHHHHCCCCCEEEECHHHHHHHHHHCCCCCC
Q ss_conf ---------8899----------------------------------999997316982899721687665420445563
Q gi|254780334|r 154 ---------NVED----------------------------------IIATLITNEKPDLVIIDSIQTLWSQTAESSPGT 190 (479)
Q Consensus 154 ---------~l~~----------------------------------il~~~i~~~~~~~vVIDSIQtl~~~~~~s~~Gs 190 (479)
T Consensus 108 ~fg~~~~g~~~~e~~~r~~~~l~~~gl~~~~~~~~p~~LSGGqkqRVaiA~-aLa~~P~iLilDEPTagLDp-------- 178 (286)
T PRK13646 108 IFGPKNFKMNLDEAKNYAHRLLMDLGFSRDVMSQSPFQMSGGQMRKIAIVS-ILAMNPDIIVVDEPTAGLDP-------- 178 (286)
T ss_pred HHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCHHHHHHHHHHH-HHHCCCCEEEEECCCCCCCH--------
T ss_conf 867977799999999999999998499475775694329999999999999-98519899998387443898--------
Q ss_pred HHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCHHHHHHHHHEEEEEE
Q ss_conf 679999999999975307978999863036654331145787753027851
Q gi|254780334|r 191 VIQVRTSVQAMIQYAKKNGVAMVLVGHVTKEGQIAGPRVIEHMVDAVLYFE 241 (479)
Q Consensus 191 vsQvre~~~~L~~~AK~~~i~vilighvTK~G~iAGp~~LeH~VD~vl~~e 241 (479)
T Consensus 179 -~~~~~i~~ll~~l~~~~g~TiI~iTHd--------m~~v~~~adrv~vm~ 220 (286)
T PRK13646 179 -QSKRQVMRLLKSLQTDENKAIILISHD--------MNEVARYADEVIVMK 220 (286)
T ss_pred -HHHHHHHHHHHHHHHHCCCEEEEECCC--------HHHHHHHCCEEEEEE
T ss_conf -999999999999999539899999138--------999999699999998