HHsearch alignment for GI: 254780334 and conserved domain: PRK13652
>PRK13652 cbiO cobalt transporter ATP-binding subunit; Provisional.
Probab=97.86 E-value=0.00022 Score=51.54 Aligned_cols=138 Identities=20% Similarity=0.232 Sum_probs=77.2
Q ss_pred CCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCH-HHHHHHHHHCCCCCCC--HHEECCC--------
Q ss_conf 9857870899954987518899999999985039819999864630-4788887520157751--0000347--------
Q gi|254780334|r 85 GGFVRGSVILVGGDPGIGKSTLLMQTAASLAYKKHRITYVSGEEAI-GQIRLRAQRLNTINSS--VYIAIET-------- 153 (479)
Q Consensus 85 GGl~~Gs~~Li~G~PGvGKSTL~Lqia~~~a~~g~~vlYvS~EEs~-~Qi~~Ra~Rl~~~~~~--i~~~~e~-------- 153 (479)
T Consensus 25 ~~i~~Ge~~aliG~NGaGKSTLl~~i~Gll~p~~G~-I~i~G~~i~~~~~~~~r~~ig~vfQ~p~~~l~~~tv~~~i~~~ 103 (277)
T PRK13652 25 FIAGRKQRIAVIGPNGAGKSTLFKHFNGILKPTSGS-VLIRGEPITKENIREVRKFVGLVFQNPDDQIFSPTVEQDIAFG 103 (277)
T ss_pred EEECCCCEEEEECCCCCHHHHHHHHHHCCCCCCCEE-EEECCEECCCCCHHHHHHCCEEEEECCCHHHCCCHHHHHHHHH
T ss_conf 799899899999999947999999996699998469-9999999998999999713289987762221325599999988
Q ss_pred ----------------------CHHHH-----------------HHHHHHCCCCCEEEECHHHHHHHHHHCCCCCCHHHH
Q ss_conf ----------------------88999-----------------999973169828997216876654204455636799
Q gi|254780334|r 154 ----------------------NVEDI-----------------IATLITNEKPDLVIIDSIQTLWSQTAESSPGTVIQV 194 (479)
Q Consensus 154 ----------------------~l~~i-----------------l~~~i~~~~~~~vVIDSIQtl~~~~~~s~~GsvsQv 194 (479)
T Consensus 104 ~~~~g~~~~~~~~~v~~~l~~~gL~~~~~~~~~~LSGGqkqRvaiA~a-L~~~P~lLlLDEPtag----LD-----p~~~ 173 (277)
T PRK13652 104 PINLGLDEETVAHRVDEALHMLGLEELRDRVPHHLSGGEKKRVAIAGI-LAMEPQVLVLDEPTAG----LD-----PQGV 173 (277)
T ss_pred HHHCCCCHHHHHHHHHHHHHHCCCHHHHHCCHHHCCHHHHHHHHHHHH-HHHCCCEEEECCCCCC----CC-----HHHH
T ss_conf 988698999999999999986799788718954489999999999999-9829999998397454----89-----9999
Q ss_pred HHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCHHHHHHHHHEEEEEE
Q ss_conf 99999999975307978999863036654331145787753027851
Q gi|254780334|r 195 RTSVQAMIQYAKKNGVAMVLVGHVTKEGQIAGPRVIEHMVDAVLYFE 241 (479)
Q Consensus 195 re~~~~L~~~AK~~~i~vilighvTK~G~iAGp~~LeH~VD~vl~~e 241 (479)
T Consensus 174 ~~i~~~l~~l~~~~g~Tii~vtHd--------l~~v~~~aDri~vl~ 212 (277)
T PRK13652 174 KELFDFLNALPETYGMTVIFSTHQ--------VELVAEMADYIYVME 212 (277)
T ss_pred HHHHHHHHHHHHHCCCEEEEECCC--------HHHHHHHCCEEEEEE
T ss_conf 999999999998509899999148--------999999799999998