HHsearch alignment for GI: 254780334 and conserved domain: TIGR03574
>TIGR03574 selen_PSTK L-seryl-tRNA(Sec) kinase, archaeal. Members of this protein are L-seryl-tRNA(Sec) kinase. This enzyme is part of a two-step pathway in Eukaryota and Archaea for performing selenocysteine biosynthesis by changing serine misacylated on selenocysteine-tRNA to selenocysteine. This enzyme performs the first step, phosphorylation of the OH group of the serine side chain. This family represents archaeal proteins with this activity.
Probab=97.76 E-value=0.00027 Score=50.84 Aligned_cols=98 Identities=19% Similarity=0.269 Sum_probs=60.7
Q ss_pred EEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEECC---CCHHHHHHHHHHCCCCCCCHHEECCCCHHHHHHHHHHCCCC
Q ss_conf 899954987518899999999985039819999864---63047888875201577510000347889999999731698
Q gi|254780334|r 92 VILVGGDPGIGKSTLLMQTAASLAYKKHRITYVSGE---EAIGQIRLRAQRLNTINSSVYIAIETNVEDIIATLITNEKP 168 (479)
Q Consensus 92 ~~Li~G~PGvGKSTL~Lqia~~~a~~g~~vlYvS~E---Es~~Qi~~Ra~Rl~~~~~~i~~~~e~~l~~il~~~i~~~~~ 168 (479)
T Consensus 1 Livl~GlP~SGKSt~a~~L~~~l~~~~~~~i~~~~d~~~~~~~~~~~~~Ek---------~~r-~~~~~~v~~~l~--~~ 68 (249)
T TIGR03574 1 LIILTGLPGVGKSTFSKELSKKLSEKNIDNIILGTDLIRESFPVWKEKYEE---------FIR-DSTLYLIKTALK--NK 68 (249)
T ss_pred CEEEECCCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHCCHHHHH---------HHH-HHHHHHHHHHHC--CC
T ss_conf 978967899989999999999999829965996552002120003367799---------989-999999999843--37
Q ss_pred CEEEECHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEE
Q ss_conf 289972168766542044556367999999999997530797899986
Q gi|254780334|r 169 DLVIIDSIQTLWSQTAESSPGTVIQVRTSVQAMIQYAKKNGVAMVLVG 216 (479)
Q Consensus 169 ~~vVIDSIQtl~~~~~~s~~GsvsQvre~~~~L~~~AK~~~i~vilig 216 (479)
T Consensus 69 ~~vI~D~~n-----Y----------iKg~RYEL~clAk~~~t~~c~I~ 101 (249)
T TIGR03574 69 YSVIVDDTN-----Y----------YNSKRRDLINIAKEYNKNYIIIY 101 (249)
T ss_pred CEEEECCCC-----H----------HHHHHHHHHHHHHHCCCCEEEEE
T ss_conf 669972732-----7----------88999999999998499869999