HHsearch alignment for GI: 254780334 and conserved domain: cd03216
>cd03216 ABC_Carb_Monos_I This family represents the domain I of the carbohydrate uptake proteins that transport only monosaccharides (Monos). The Carb_Monos family is involved in the uptake of monosaccharides, such as pentoses (such as xylose, arabinose, and ribose) and hexoses (such as xylose, arabinose, and ribose), that cannot be broken down to simple sugars by hydrolysis. Pentoses include xylose, arabinose, and ribose. Important hexoses include glucose, galactose, and fructose. In members of the Carb_monos family, the single hydrophobic gene product forms a homodimer while the ABC protein represents a fusion of two nucleotide-binding domains. However, it is assumed that two copies of the ABC domains are present in the assembled transporter.
Probab=97.91 E-value=0.00034 Score=50.16 Aligned_cols=134 Identities=22% Similarity=0.251 Sum_probs=77.1
Q ss_pred CCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCHHEECCCCHHH-HHHHHHH
Q ss_conf 857870899954987518899999999985039819999864630478888752015775100003478899-9999973
Q gi|254780334|r 86 GFVRGSVILVGGDPGIGKSTLLMQTAASLAYKKHRITYVSGEEAIGQIRLRAQRLNTINSSVYIAIETNVED-IIATLIT 164 (479)
Q Consensus 86 Gl~~Gs~~Li~G~PGvGKSTL~Lqia~~~a~~g~~vlYvS~EEs~~Qi~~Ra~Rl~~~~~~i~~~~e~~l~~-il~~~i~ 164 (479)
T Consensus 22 ~i~~Gei~~lvG~nGaGKSTl~~~i~Gl~~p~~G~-i~i~G~~i~~~~~~~~~~~gi~~--v~qLSgG~~Qrv~iaral- 97 (163)
T cd03216 22 SVRRGEVHALLGENGAGKSTLMKILSGLYKPDSGE-ILVDGKEVSFASPRDARRAGIAM--VYQLSVGERQMVEIARAL- 97 (163)
T ss_pred EECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCE-EEECCEECCCCCHHHHHHCCCCE--ECCCCHHHHHHHHHHHHH-
T ss_conf 98799899999889989999999995776898578-99999999999999999879948--946998999999999999-
Q ss_pred CCCCCEEEECHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCHHHHHHHHHEEEEEE
Q ss_conf 16982899721687665420445563679999999999975307978999863036654331145787753027851
Q gi|254780334|r 165 NEKPDLVIIDSIQTLWSQTAESSPGTVIQVRTSVQAMIQYAKKNGVAMVLVGHVTKEGQIAGPRVIEHMVDAVLYFE 241 (479)
Q Consensus 165 ~~~~~~vVIDSIQtl~~~~~~s~~GsvsQvre~~~~L~~~AK~~~i~vilighvTK~G~iAGp~~LeH~VD~vl~~e 241 (479)
T Consensus 98 ~~~p~llilDEPt----~gLD-----~~~~~~i~~~l~~l-~~~G~til~vtH~--------l~~~~~~~Drv~vl~ 156 (163)
T cd03216 98 ARNARLLILDEPT----AALT-----PAEVERLFKVIRRL-RAQGVAVIFISHR--------LDEVFEIADRVTVLR 156 (163)
T ss_pred HHCCCEEEEECCC----CCCC-----HHHHHHHHHHHHHH-HHCCCEEEEEECC--------HHHHHHHCCEEEEEC
T ss_conf 7299999990975----5799-----99999999999999-8789899999384--------999998699999990