HHsearch alignment for GI: 254780334 and conserved domain: cd03250
>cd03250 ABCC_MRP_domain1 Domain 1 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=97.43 E-value=0.0011 Score=46.46 Aligned_cols=136 Identities=21% Similarity=0.273 Sum_probs=69.5
Q ss_pred CCCCCCEEEEECCCCCCHHHHHHHHHHHHHC------CCCCEEEEECCC-----CHHH------------HHHHHHHCCC
Q ss_conf 8578708999549875188999999999850------398199998646-----3047------------8888752015
Q gi|254780334|r 86 GFVRGSVILVGGDPGIGKSTLLMQTAASLAY------KKHRITYVSGEE-----AIGQ------------IRLRAQRLNT 142 (479)
Q Consensus 86 Gl~~Gs~~Li~G~PGvGKSTL~Lqia~~~a~------~g~~vlYvS~EE-----s~~Q------------i~~Ra~Rl~~ 142 (479)
T Consensus 27 ~i~~Ge~~~IvG~sGsGKSTLl~~i~G~~~~~~G~I~~~g~i~~v~Q~~~l~~~Tv~eNi~~~~~~~~~~~~~~~~~~~l 106 (204)
T cd03250 27 EVPKGELVAIVGPVGSGKSSLLSALLGELEKLSGSVSVPGSIAYVSQEPWIQNGTIRENILFGKPFDEERYEKVIKACAL 106 (204)
T ss_pred EECCCCEEEEECCCCCCHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHCC
T ss_conf 97699899999999985899999981895256895225898899958775677509999744686688999999999761
Q ss_pred CCCCHHE--------ECC--CCHH-----H-HHHHHHHCCCCCEEEECHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 7751000--------034--7889-----9-9999973169828997216876654204455636799999999999753
Q gi|254780334|r 143 INSSVYI--------AIE--TNVE-----D-IIATLITNEKPDLVIIDSIQTLWSQTAESSPGTVIQVRTSVQAMIQYAK 206 (479)
Q Consensus 143 ~~~~i~~--------~~e--~~l~-----~-il~~~i~~~~~~~vVIDSIQtl~~~~~~s~~GsvsQvre~~~~L~~~AK 206 (479)
T Consensus 107 ~~-~~~~~~~~~~~~i~~~~~~LSgGQkQRvalARal-~~~~~illlDEPt----s~LD~----~~-~~~i~~~l~~~~~ 175 (204)
T cd03250 107 EP-DLEILPDGDLTEIGEKGINLSGGQKQRISLARAV-YSDADIYLLDDPL----SAVDA----HV-GRHIFENCILGLL 175 (204)
T ss_pred HH-HHHHHHCCCCCEECCCCCCCCHHHHHHHHHHHHH-HCCCCEEEEECCC----CCCCH----HH-HHHHHHHHHHHHH
T ss_conf 98-8985135352452378875799999999999999-5399999996987----66699----99-9999999999986
Q ss_pred HCCCEEEEEEEECCCCCCCCHHHHHHHHHEEEEEE
Q ss_conf 07978999863036654331145787753027851
Q gi|254780334|r 207 KNGVAMVLVGHVTKEGQIAGPRVIEHMVDAVLYFE 241 (479)
Q Consensus 207 ~~~i~vilighvTK~G~iAGp~~LeH~VD~vl~~e 241 (479)
T Consensus 176 ~~~~Tvi~itH~--------~~~~~~-~D~ii~l~ 201 (204)
T cd03250 176 LNNKTRILVTHQ--------LQLLPH-ADQIVVLD 201 (204)
T ss_pred HCCCEEEEECCC--------HHHHHH-CCEEEEEC
T ss_conf 089899998079--------999970-99999972