HHsearch alignment for GI: 254780334 and conserved domain: cd03254
>cd03254 ABCC_Glucan_exporter_like Glucan exporter ATP-binding protein. In A. tumefaciens cyclic beta-1, 2-glucan must be transported into the periplasmic space to exert its action as a virluence factor. This subfamily belongs to the MRP-like family and is involved in drug, peptide, and lipid export. The MRP-like family, similar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains each composed of six transmembrane (TM) helices and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=97.74 E-value=0.00041 Score=49.53 Aligned_cols=41 Identities=22% Similarity=0.289 Sum_probs=30.0
Q ss_pred CCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEECC
Q ss_conf 857870899954987518899999999985039819999864
Q gi|254780334|r 86 GFVRGSVILVGGDPGIGKSTLLMQTAASLAYKKHRITYVSGE 127 (479)
Q Consensus 86 Gl~~Gs~~Li~G~PGvGKSTL~Lqia~~~a~~g~~vlYvS~E 127 (479)
T Consensus 25 ~i~~Ge~vaivG~sGsGKSTLl~ll~gl~~p~~G-~I~idg~ 65 (229)
T cd03254 25 SIKPGETVAIVGPTGAGKTTLINLLMRFYDPQKG-QILIDGI 65 (229)
T ss_pred EECCCCEEEEECCCCCHHHHHHHHHHCCCCCCCC-EEEECCE
T ss_conf 9879999999999998099999999668667873-8999999