HHsearch alignment for GI: 254780334 and conserved domain: cd03288
>cd03288 ABCC_SUR2 The SUR domain 2. The sulfonylurea receptor SUR is an ATP binding cassette (ABC) protein of the ABCC/MRP family. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=97.80 E-value=0.00049 Score=49.02 Aligned_cols=43 Identities=19% Similarity=0.170 Sum_probs=31.0
Q ss_pred CCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEECC
Q ss_conf 59857870899954987518899999999985039819999864
Q gi|254780334|r 84 GGGFVRGSVILVGGDPGIGKSTLLMQTAASLAYKKHRITYVSGE 127 (479)
Q Consensus 84 GGGl~~Gs~~Li~G~PGvGKSTL~Lqia~~~a~~g~~vlYvS~E 127 (479)
T Consensus 41 nl~I~~Ge~vaIvG~sGsGKSTL~~ll~gl~~p~~G-~I~idg~ 83 (257)
T cd03288 41 KAYIKPGQKVGICGRTGSGKSSLSLAFFRMVDIFDG-KIVIDGI 83 (257)
T ss_pred EEEECCCCEEEEECCCCCCHHHHHHHHHHCCCCCCC-EEEECCE
T ss_conf 899879999999999998199999999605667888-8999989