>cd03299 ABC_ModC_like Archeal protein closely related to ModC. ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.

Probab=97.81 E-value=0.00046 Score=49.16 Aligned_cols=136 Identities=16% Similarity=0.207 Sum_probs=75.2 Q ss_pred CCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCHHEECCCC----------- Q ss_conf 857870899954987518899999999985039819999864630478888752015775100003478----------- Q gi|254780334|r 86 GFVRGSVILVGGDPGIGKSTLLMQTAASLAYKKHRITYVSGEEAIGQIRLRAQRLNTINSSVYIAIETN----------- 154 (479) Q Consensus 86 Gl~~Gs~~Li~G~PGvGKSTL~Lqia~~~a~~g~~vlYvS~EEs~~Qi~~Ra~Rl~~~~~~i~~~~e~~----------- 154 (479) T Consensus 21 ~v~~Ge~~~iiGpSGsGKSTLlr~i~Gl~-~p~~G~I~~~G~di~~~-~~~~r~ig~vfQ~~~Lfp~~tV~eNi~~~l~~ 98 (235) T cd03299 21 EVERGDYFVILGPTGSGKSVLLETIAGFI-KPDSGKILLNGKDITNL-PPEKRDISYVPQNYALFPHMTVYKNIAYGLKK 98 (235) T ss_pred EECCCCEEEEECCCCCHHHHHHHHHHCCC-CCCCEEEEECCEECCCC-CHHHCCEEEECCCCCCCCCCCHHHHHHHHHHH T ss_conf 98899899999999635999999997499-99965999999999999-97678978945798668999099999999987 Q ss_pred --------------------HHH-----------------HHHHHHHCCCCCEEEECHHHHHHHHHHCCCCCCHHHHHHH Q ss_conf --------------------899-----------------9999973169828997216876654204455636799999 Q gi|254780334|r 155 --------------------VED-----------------IIATLITNEKPDLVIIDSIQTLWSQTAESSPGTVIQVRTS 197 (479) Q Consensus 155 --------------------l~~-----------------il~~~i~~~~~~~vVIDSIQtl~~~~~~s~~GsvsQvre~ 197 (479) T Consensus 99 ~~~~~~e~~~rv~e~l~~~gl~~~~~~~p~~LSGGq~QRVaiARAl-~~~P~llllDEP~s----~LD~-----~~~~~i 168 (235) T cd03299 99 RKVDKKEIERKVLEIAEMLGIDHLLNRKPETLSGGEQQRVAIARAL-VVNPKILLLDEPFS----ALDV-----RTKEKL 168 (235) T ss_pred CCCCHHHHHHHHHHHHHHCCCHHHHHCCHHHCCHHHHHHHHHHHHH-HCCCCEEEEECCCC----CCCH-----HHHHHH T ss_conf 6999999999999999877997787489445899999999999999-73899899928876----4699-----999999 Q ss_pred HHHHHHHHHHCCCEEEEEEEECCCCCCCCHHHHHHHHHEEEEEE Q ss_conf 99999975307978999863036654331145787753027851 Q gi|254780334|r 198 VQAMIQYAKKNGVAMVLVGHVTKEGQIAGPRVIEHMVDAVLYFE 241 (479) Q Consensus 198 ~~~L~~~AK~~~i~vilighvTK~G~iAGp~~LeH~VD~vl~~e 241 (479) T Consensus 169 ~~~l~~l~~~~~~T~i~vTHd--------~~~a~~~aDri~vl~ 204 (235) T cd03299 169 REELKKIRKEFGVTVLHVTHD--------FEEAWALADKVAIML 204 (235) T ss_pred HHHHHHHHHHHCCEEEEECCC--------HHHHHHHCCEEEEEE T ss_conf 999999999829999998789--------999999699999998

HHsearch alignment for GI: 254780334 and conserved domain: cd03299