HHsearch alignment for GI: 254780334 and conserved domain: pfam00006
>pfam00006 ATP-synt_ab ATP synthase alpha/beta family, nucleotide-binding domain. This family includes the ATP synthase alpha and beta subunits, the ATP synthase associated with flagella and the termination factor Rho.
Probab=97.91 E-value=0.0012 Score=46.08 Aligned_cols=161 Identities=21% Similarity=0.272 Sum_probs=92.1
Q ss_pred CCCHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHC---CCCCCCHHEE
Q ss_conf 7812488886598578708999549875188999999999850398199998646304788887520---1577510000
Q gi|254780334|r 74 THIDELDRVTGGGFVRGSVILVGGDPGIGKSTLLMQTAASLAYKKHRITYVSGEEAIGQIRLRAQRL---NTINSSVYIA 150 (479)
Q Consensus 74 TGi~eLDrvLGGGl~~Gs~~Li~G~PGvGKSTL~Lqia~~~a~~g~~vlYvS~EEs~~Qi~~Ra~Rl---~~~~~~i~~~ 150 (479)
T Consensus 1 TGi~~ID~l~--pig~GQr~~I~g~~g~GKt~l~~~i~~~~~~-~~~~V~~~iGer~~ev~~~~~~~~~~~~~~~t~vv~ 77 (213)
T pfam00006 1 TGIRAIDLLL--PIGKGQRIGIFGGSGTGKTVLLGMIARNAKA-DVVEVYVLIGERGREVAEFIEELLGEGALKRTVVVA 77 (213)
T ss_pred CCCCEEECCC--CCCCCCEEEEECCCCCCHHHHHHHHHHHHHH-CCCEEEEECCCCHHHHHHHHHHHHCCCCCCCEEEEE
T ss_conf 9840002016--6457888778789999889999999985661-893599813777799999999752137665069998
Q ss_pred CCCC---HH---------HHHHHHHHCCCCCEEEECHHHHHHHH--HH----------CCCCCCHHHHHHHHHHHHHHH-
Q ss_conf 3478---89---------99999973169828997216876654--20----------445563679999999999975-
Q gi|254780334|r 151 IETN---VE---------DIIATLITNEKPDLVIIDSIQTLWSQ--TA----------ESSPGTVIQVRTSVQAMIQYA- 205 (479)
Q Consensus 151 ~e~~---l~---------~il~~~i~~~~~~~vVIDSIQtl~~~--~~----------~s~~GsvsQvre~~~~L~~~A- 205 (479)
T Consensus 78 ~~~d~~~~~r~~~~~~a~~~AEyf~~~G~dVlvi~Dsltr~A~A~reis~~~g~~p~~~gyp~~~~---~~~~~l~ERag 154 (213)
T pfam00006 78 ATSDEPPAERYLAPYTALTIAEYFRDQGKDVLLLLDSLTRFARALREISLLLGEPPGREGYPGSLF---SDLARLLERAG 154 (213)
T ss_pred ECCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHH---HHHHHHHHHHH
T ss_conf 468898789999999999999999976996899837805999998765001479985456391788---88799998753
Q ss_pred H---HCCCEEEEEEEECCCCCCCCHH--HHHHHHHEEEEEE
Q ss_conf 3---0797899986303665433114--5787753027851
Q gi|254780334|r 206 K---KNGVAMVLVGHVTKEGQIAGPR--VIEHMVDAVLYFE 241 (479)
Q Consensus 206 K---~~~i~vilighvTK~G~iAGp~--~LeH~VD~vl~~e 241 (479)
T Consensus 155 ~~~~~GSiT~l~tv~~-~~~d~~dpi~~~~~~~~dg~ivLs 194 (213)
T pfam00006 155 KVEGGGSITALPTVLV-PGGDITDPIPDNTISITDGQIVLS 194 (213)
T ss_pred CCCCCCCEEEEEEEEE-CCCCCCCCHHHHHHHHCCEEEEEC
T ss_conf 4688863478889980-488867515676521135599996