HHsearch alignment for GI: 254780334 and conserved domain: pfam00308

Probab=97.54  E-value=0.00064  Score=48.17  Aligned_cols=103  Identities=20%  Similarity=0.315  Sum_probs=65.3

Q ss_pred             CEEEEECCCCCCHHHHHHHHHHHHHCC--CCCEEEEECCCCHHHHHHHHHHCCCCCCCHHEECCCCHHHHHHHHHHCCCC
Q ss_conf             089995498751889999999998503--981999986463047888875201577510000347889999999731698
Q gi|254780334|r   91 SVILVGGDPGIGKSTLLMQTAASLAYK--KHRITYVSGEEAIGQIRLRAQRLNTINSSVYIAIETNVEDIIATLITNEKP  168 (479)
Q Consensus        91 s~~Li~G~PGvGKSTL~Lqia~~~a~~--g~~vlYvS~EEs~~Qi~~Ra~Rl~~~~~~i~~~~e~~l~~il~~~i~~~~~  168 (479)
T Consensus        35 npl~i~G~~G~GKTHLLqA~~~~~~~~~~~~~v~yl~~~~~~~~~~-------------~~l~~~~~~~f~~~l---~~~   98 (219)
T pfam00308        35 NPLFIYGGVGLGKTHLLHAIGNYALRNFPNLRVVYLTSEEFLNDFV-------------DALRDNKIEAFKKSY---RNV   98 (219)
T ss_pred             CCEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHH-------------HHHHCCCHHHHHHHH---HHC
T ss_conf             8269988999988899999999999849998288843999999889-------------999818888999997---632


Q ss_pred             CEEEECHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEE
Q ss_conf             28997216876654204455636799999999999753079789998630
Q gi|254780334|r  169 DLVIIDSIQTLWSQTAESSPGTVIQVRTSVQAMIQYAKKNGVAMVLVGHV  218 (479)
Q Consensus       169 ~~vVIDSIQtl~~~~~~s~~GsvsQvre~~~~L~~~AK~~~i~vilighv  218 (479)
T Consensus        99 d~l~iDDi~~l~~~-----~----~~ee~lf~l~N~~~~~~~~lllts~~  139 (219)
T pfam00308        99 DLLLIDDIQFLAGK-----E----KTQEEFFHTFNALHENNKQIVLTSDR  139 (219)
T ss_pred             CHHHHCCHHHHCCC-----H----HHHHHHHHHHHHHHHCCCEEEEECCC
T ss_conf             33652236765686-----4----78999999999999729869997799