HHsearch alignment for GI: 254780334 and conserved domain: pfam00931

Probab=96.99  E-value=0.0079  Score=40.18  Aligned_cols=87  Identities=20%  Similarity=0.169  Sum_probs=45.4

Q ss_pred             CCEEEEECCCCCCHHHHHHHHHHH--HHCCCCCEEEEECCC--CHHHHHHH-HHHCCCCCCCHHEECCCCHHHHHHHHHH
Q ss_conf             708999549875188999999999--850398199998646--30478888-7520157751000034788999999973
Q gi|254780334|r   90 GSVILVGGDPGIGKSTLLMQTAAS--LAYKKHRITYVSGEE--AIGQIRLR-AQRLNTINSSVYIAIETNVEDIIATLIT  164 (479)
Q Consensus        90 Gs~~Li~G~PGvGKSTL~Lqia~~--~a~~g~~vlYvS~EE--s~~Qi~~R-a~Rl~~~~~~i~~~~e~~l~~il~~~i~  164 (479)
T Consensus        19 ~~vI~I~G~gGiGKTtLA~~v~~~~~i~~~F~~~~wv~vs~~~~~~~i~~~i~~~l~~~~~~~~~~~~~~l~~~l~~~L~   98 (285)
T pfam00931        19 LGVVGIVGMGGVGKTTLAKQIYNDDSVGGHFDSVAWVVVSKTYTEFRLQKDILQELGLDDSDWVEKNESELAVKIKEALL   98 (285)
T ss_pred             CEEEEEECCCCCCHHHHHHHHHCCHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHC
T ss_conf             53999889995639999999971655650598389999797666899999999985666545555789999999999972


Q ss_pred             CCCCCEEEECHHH
Q ss_conf             1698289972168
Q gi|254780334|r  165 NEKPDLVIIDSIQ  177 (479)
Q Consensus       165 ~~~~~~vVIDSIQ  177 (479)
T Consensus        99 ~-kr~LiVLDDVw  110 (285)
T pfam00931        99 R-KRFLLVLDDVW  110 (285)
T ss_pred             C-CCEEEEECCCC
T ss_conf             7-96699963888