HHsearch alignment for GI: 254780334 and conserved domain: pfam03308

>pfam03308 ArgK ArgK protein. The ArgK protein acts as an ATPase enzyme and as a kinase, and phosphorylates periplasmic binding proteins involved in the LAO (lysine, arginine, ornithine)/AO transport systems.
Probab=97.31  E-value=0.0052  Score=41.48  Aligned_cols=134  Identities=18%  Similarity=0.175  Sum_probs=70.0

Q ss_pred             HHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCHHEECCCCHH
Q ss_conf             24888865985787089995498751889999999998503981999986463047888875201577510000347889
Q gi|254780334|r   77 DELDRVTGGGFVRGSVILVGGDPGIGKSTLLMQTAASLAYKKHRITYVSGEEAIGQIRLRAQRLNTINSSVYIAIETNVE  156 (479)
Q Consensus        77 ~eLDrvLGGGl~~Gs~~Li~G~PGvGKSTL~Lqia~~~a~~g~~vlYvS~EEs~~Qi~~Ra~Rl~~~~~~i~~~~e~~l~  156 (479)
T Consensus        17 ~ll~~~~~~-~g~a~~iGiTG~PGaGKStli~~l~~~~~~~g~~vaVlAvDPSS~~s-----------------gGaiLG   78 (267)
T pfam03308        17 ELLRRLMPL-TGRAHRVGITGVPGAGKSTLIEALGMELRRRGHRVAVLAVDPSSPFT-----------------GGSILG   78 (267)
T ss_pred             HHHHHHHHH-CCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCC-----------------CCCCCC
T ss_conf             999998743-59955998768998879999999999999689868999978999888-----------------863001


Q ss_pred             HHHHHHHHCCCCCEEEECHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCHHHHHHHHHE
Q ss_conf             99999973169828997216876654204455636799999999999753079789998630366543311457877530
Q gi|254780334|r  157 DIIATLITNEKPDLVIIDSIQTLWSQTAESSPGTVIQVRTSVQAMIQYAKKNGVAMVLVGHVTKEGQIAGPRVIEHMVDA  236 (479)
Q Consensus       157 ~il~~~i~~~~~~~vVIDSIQtl~~~~~~s~~GsvsQvre~~~~L~~~AK~~~i~vilighvTK~G~iAGp~~LeH~VD~  236 (479)
T Consensus        79 Dr~RM-~~~~~~~~vfiRs~~s------rg~lGGls---~~t~~~i~lleaaGfD~IivETVGV---GQsE~~v~~~aD~  145 (267)
T pfam03308        79 DRTRM-QRLAVDPGAFIRSSPS------RGALGGLS---RATREAILLLDAAGFDVIIIETVGV---GQSEVDIANMADT  145 (267)
T ss_pred             CHHHH-HHHCCCCCEEEEECCC------CCCCCCCC---HHHHHHHHHHHHCCCCEEEEECCCC---CCCCHHHHHHCCE
T ss_conf             07777-6505899858864577------88888714---7699999999977999999924777---7530355541576


Q ss_pred             EEEEE
Q ss_conf             27851
Q gi|254780334|r  237 VLYFE  241 (479)
Q Consensus       237 vl~~e  241 (479)
T Consensus       146 ~llv~  150 (267)
T pfam03308       146 FVLVT  150 (267)
T ss_pred             EEEEE
T ss_conf             89995