RPSBLAST alignment for GI: 254780334 and conserved domain: TIGR00665
>gnl|CDD|161985 TIGR00665, DnaB, replicative DNA helicase. This model describes the helicase DnaB, a homohexameric protein required for DNA replication. The homohexamer can form a ring around a single strand of DNA near a replication fork. An intein of > 400 residues is found at a conserved location in DnaB of Synechocystis PCC6803, Rhodothermus marinus (both experimentally confirmed), and Mycobacterium tuberculosis. The intein removes itself by a self-splicing reaction. The seed alignment contains inteins so that the model built from the seed alignment will model a low cost at common intein insertion sites. Length = 434
Score = 38.9 bits (92), Expect = 0.003
Identities = 12/47 (25%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Query: 72 IQTHIDELDRVTGGGFVRGSVILVGGDPGIGKSTLLMQTAASLAYKK 118
+ T +LD++T G +I++ P +GK+ + A + A K+
Sbjct: 178 VPTGFTDLDKLTSG-LQPSDLIILAARPSMGKTAFALNIAENAAIKE 223