RPSBLAST alignment for GI: 254780334 and conserved domain: TIGR00665

>gnl|CDD|161985 TIGR00665, DnaB, replicative DNA helicase. This model describes the helicase DnaB, a homohexameric protein required for DNA replication. The homohexamer can form a ring around a single strand of DNA near a replication fork. An intein of > 400 residues is found at a conserved location in DnaB of Synechocystis PCC6803, Rhodothermus marinus (both experimentally confirmed), and Mycobacterium tuberculosis. The intein removes itself by a self-splicing reaction. The seed alignment contains inteins so that the model built from the seed alignment will model a low cost at common intein insertion sites. Length = 434
 Score = 38.9 bits (92), Expect = 0.003
 Identities = 12/47 (25%), Positives = 24/47 (51%), Gaps = 1/47 (2%)

Query: 72  IQTHIDELDRVTGGGFVRGSVILVGGDPGIGKSTLLMQTAASLAYKK 118
           + T   +LD++T G      +I++   P +GK+   +  A + A K+
Sbjct: 178 VPTGFTDLDKLTSG-LQPSDLIILAARPSMGKTAFALNIAENAAIKE 223