RPSBLAST alignment for GI: 254780334 and conserved domain: cd01123
>gnl|CDD|29989 cd01123, Rad51_DMC1_radA, Rad51_DMC1_radA,B. This group of recombinases includes the eukaryotic proteins RAD51, RAD55/57 and the meiosis-specific protein DMC1, and the archaeal proteins radA and radB. They are closely related to the bacterial RecA group. Rad51 proteins catalyze a similiar recombination reaction as RecA, using ATP-dependent DNA binding activity and a DNA-dependent ATPase. However, this reaction is less efficient and requires accessory proteins such as RAD55/57 .. Length = 235
Score = 56.0 bits (135), Expect = 2e-08
Identities = 54/241 (22%), Positives = 92/241 (38%), Gaps = 42/241 (17%)
Query: 72 IQTHIDELDRVTGGGFVRGSVILVGGDPGIGKSTLLMQTAASLAYKKH------RITYVS 125
+ T LD + GGG GS+ + G+ G GK+ L Q A ++ + Y+
Sbjct: 1 LTTGSKALDELLGGGIETGSITEIFGEFGSGKTQLCHQLAVTVQLPIELGGLEGKAVYID 60
Query: 126 GEEAIGQIRLRA------QRLNTINSSVYIAIETNVEDII-------ATLITNEKPDLVI 172
E RL + ++Y+A N + + A LI + + LVI
Sbjct: 61 TEGTFRPERLVQIAERFGLDPEEVLDNIYVARAYNSDHQLQLLEELEAILIESSRIKLVI 120
Query: 173 IDSIQTLWSQTAESSPGTVIQVRTS-----VQAMIQYAKKNGVAMVLVGHVT-------- 219
+DS+ L+ AE + R ++ + + A + VA+V+ VT
Sbjct: 121 VDSVTALFR--AEFDGRGELAERQQHLAKLLRTLKRLADEFNVAVVITNQVTARPDGAAM 178
Query: 220 ---KEGQIAGPRVIEHMVDAVLYFEGGTRNTQYDYRILRSVKNRFGPTDEIGVFEMSDKG 276
+ AG + H LY G RI + V + P E VF ++++G
Sbjct: 179 FGGDPKKPAGGNIWAHASTTRLYLRKGRGEE----RIAKIVDSPHLPEGEA-VFAITEEG 233
Query: 277 L 277
+
Sbjct: 234 I 234