RPSBLAST alignment for GI: 254780334 and conserved domain: cd01393
>gnl|CDD|30003 cd01393, recA_like, RecA is a bacterial enzyme which has roles in homologous recombination, DNA repair, and the induction of the SOS response. RecA couples ATP hydrolysis to DNA strand exchange. While prokaryotes have a single RecA protein, eukaryotes have multiple RecA homologs such as Rad51, DMC1 and Rad55/57. Archaea have the RecA-like homologs radA and radB.. Length = 226
Score = 59.8 bits (145), Expect = 1e-09
Identities = 50/227 (22%), Positives = 87/227 (38%), Gaps = 34/227 (14%)
Query: 72 IQTHIDELDRVTGGGFVRGSVILVGGDPGIGKSTLLMQTAASLAYKKH------RITYVS 125
I T LD + GGG G + + G+ G GK+ L +Q A ++ Y+
Sbjct: 1 ISTGSKALDELLGGGIPTGRITEIFGEFGSGKTQLCLQLAVEAQLPGELGGLEGKVVYID 60
Query: 126 GEEAIGQIRLRA------QRLNTINSSVYIAIETNVE------DIIATLITNEKPDLVII 173
E A RL + ++Y+A N E + + ++++ + DLV++
Sbjct: 61 TEGAFRPERLVQLAVRFGLDPEEVLDNIYVARPYNGEQQLEIVEELERIMSSGRVDLVVV 120
Query: 174 DSIQTLWSQTAESSPGTVIQVRTS-----VQAMIQYAKKNGVAMVLVGHVT--------K 220
DS+ L+ + E ++ R ++ +++ A K VA+V V
Sbjct: 121 DSVAALFRK--EFIGRGMLAERARLLSQALRKLLRLADKFNVAVVFTNQVRAKVDVMFGD 178
Query: 221 EGQIAGPRVIEHMVDAVLYFEGGTRNTQYDYRILRSVKNRFGPTDEI 267
AG + H L G R + RI + VK+ P E
Sbjct: 179 PETPAGGNALAHASTTRLDLRKG-RGIIGERRIAKVVKSPALPEAEA 224