RPSBLAST alignment for GI: 254780334 and conserved domain: COG1066

>gnl|CDD|31265 COG1066, Sms, Predicted ATP-dependent serine protease [Posttranslational modification, protein turnover, chaperones]. Length = 456
 Score =  586 bits (1511), Expect = e-168
 Identities = 237/460 (51%), Positives = 320/460 (69%), Gaps = 10/460 (2%)

Query: 1   MVKIRSQYFCQSCGEIHSRWIGKCDSCNAWNTIIED---SSRKESDQRFSKTIKQGHSIS 57
           M K ++ + CQ CG +  +W+GKC +C AWNT++E+   +S   +  +            
Sbjct: 1   MAKKKTAFVCQECGYVSPKWLGKCPACGAWNTLVEEVLAASPGGAPNKRRSGKAGSEPSK 60

Query: 58  LFMLSEESIEEESRIQTHIDELDRVTGGGFVRGSVILVGGDPGIGKSTLLMQTAASLAYK 117
           +  LS+  +EEE RI T I+ELDRV GGG V GSVIL+GGDPGIGKSTLL+Q AA LA K
Sbjct: 61  VLKLSDIELEEEPRISTGIEELDRVLGGGLVPGSVILIGGDPGIGKSTLLLQVAARLA-K 119

Query: 118 KHRITYVSGEEAIGQIRLRAQRLNTINSSVYIAIETNVEDIIATLITNEKPDLVIIDSIQ 177
           + ++ YVSGEE++ QI+LRA RL    +++Y+  ETN+EDIIA  +  EKPDLV+IDSIQ
Sbjct: 120 RGKVLYVSGEESLQQIKLRADRLGLPTNNLYLLAETNLEDIIAE-LEQEKPDLVVIDSIQ 178

Query: 178 TLWSQTAESSPGTVIQVRTSVQAMIQYAKKNGVAMVLVGHVTKEGQIAGPRVIEHMVDAV 237
           TL+S+   S+PG+V QVR     +++ AK   +A+ +VGHVTKEG IAGPRV+EHMVD V
Sbjct: 179 TLYSEEITSAPGSVSQVREVAAELMRLAKTKNIAIFIVGHVTKEGAIAGPRVLEHMVDTV 238

Query: 238 LYFEGGTRNTQYDYRILRSVKNRFGPTDEIGVFEMSDKGLQEVSDPSKIFLSDRDSTSPG 297
           LYFEG   +    YRILRSVKNRFG T+E+GVFEM++ GL+EVS+PS +FLS+R   +PG
Sbjct: 239 LYFEG---DRHSRYRILRSVKNRFGATNELGVFEMTENGLREVSNPSALFLSERGEQTPG 295

Query: 298 TAVFAGIEGTRALLVEIQSLVVPTSLGMPRRTVVGWDSSRLAMILAVLEARCNIKFGNHD 357
           +AV   +EGTR LLVEIQ+LV P+S G PRR  VG D +RLAM+LAVLE R  +  G+ D
Sbjct: 296 SAVVVVMEGTRPLLVEIQALVSPSSFGNPRRVAVGLDQNRLAMLLAVLEKRLGLPLGDQD 355

Query: 358 VHLNIAGGYRISEPAADVAVAAALISSILSIPLPSDFVYFGEVSLSGSVRAVGHMQQRLK 417
           V++N+AGG +++EPAAD+AVA AL+SS  + PLP D V FGEV LSG +R V   ++RLK
Sbjct: 356 VYVNVAGGVKVTEPAADLAVALALVSSFRNRPLPQDTVVFGEVGLSGEIRPVPRGERRLK 415

Query: 418 EAEKIGFLSGVFPESAKGECKIGMLDRQYIKNLSDLVKKI 457
           EA K+GF   + P+          +    +  L++ ++ +
Sbjct: 416 EAAKLGFKRAIVPKGNIP--LPEGIKVIGVSTLAEALEVV 453