RPSBLAST alignment for GI: 254780334 and conserved domain: COG1066
>gnl|CDD|31265 COG1066, Sms, Predicted ATP-dependent serine protease [Posttranslational modification, protein turnover, chaperones]. Length = 456
Score = 586 bits (1511), Expect = e-168
Identities = 237/460 (51%), Positives = 320/460 (69%), Gaps = 10/460 (2%)
Query: 1 MVKIRSQYFCQSCGEIHSRWIGKCDSCNAWNTIIED---SSRKESDQRFSKTIKQGHSIS 57
M K ++ + CQ CG + +W+GKC +C AWNT++E+ +S + +
Sbjct: 1 MAKKKTAFVCQECGYVSPKWLGKCPACGAWNTLVEEVLAASPGGAPNKRRSGKAGSEPSK 60
Query: 58 LFMLSEESIEEESRIQTHIDELDRVTGGGFVRGSVILVGGDPGIGKSTLLMQTAASLAYK 117
+ LS+ +EEE RI T I+ELDRV GGG V GSVIL+GGDPGIGKSTLL+Q AA LA K
Sbjct: 61 VLKLSDIELEEEPRISTGIEELDRVLGGGLVPGSVILIGGDPGIGKSTLLLQVAARLA-K 119
Query: 118 KHRITYVSGEEAIGQIRLRAQRLNTINSSVYIAIETNVEDIIATLITNEKPDLVIIDSIQ 177
+ ++ YVSGEE++ QI+LRA RL +++Y+ ETN+EDIIA + EKPDLV+IDSIQ
Sbjct: 120 RGKVLYVSGEESLQQIKLRADRLGLPTNNLYLLAETNLEDIIAE-LEQEKPDLVVIDSIQ 178
Query: 178 TLWSQTAESSPGTVIQVRTSVQAMIQYAKKNGVAMVLVGHVTKEGQIAGPRVIEHMVDAV 237
TL+S+ S+PG+V QVR +++ AK +A+ +VGHVTKEG IAGPRV+EHMVD V
Sbjct: 179 TLYSEEITSAPGSVSQVREVAAELMRLAKTKNIAIFIVGHVTKEGAIAGPRVLEHMVDTV 238
Query: 238 LYFEGGTRNTQYDYRILRSVKNRFGPTDEIGVFEMSDKGLQEVSDPSKIFLSDRDSTSPG 297
LYFEG + YRILRSVKNRFG T+E+GVFEM++ GL+EVS+PS +FLS+R +PG
Sbjct: 239 LYFEG---DRHSRYRILRSVKNRFGATNELGVFEMTENGLREVSNPSALFLSERGEQTPG 295
Query: 298 TAVFAGIEGTRALLVEIQSLVVPTSLGMPRRTVVGWDSSRLAMILAVLEARCNIKFGNHD 357
+AV +EGTR LLVEIQ+LV P+S G PRR VG D +RLAM+LAVLE R + G+ D
Sbjct: 296 SAVVVVMEGTRPLLVEIQALVSPSSFGNPRRVAVGLDQNRLAMLLAVLEKRLGLPLGDQD 355
Query: 358 VHLNIAGGYRISEPAADVAVAAALISSILSIPLPSDFVYFGEVSLSGSVRAVGHMQQRLK 417
V++N+AGG +++EPAAD+AVA AL+SS + PLP D V FGEV LSG +R V ++RLK
Sbjct: 356 VYVNVAGGVKVTEPAADLAVALALVSSFRNRPLPQDTVVFGEVGLSGEIRPVPRGERRLK 415
Query: 418 EAEKIGFLSGVFPESAKGECKIGMLDRQYIKNLSDLVKKI 457
EA K+GF + P+ + + L++ ++ +
Sbjct: 416 EAAKLGFKRAIVPKGNIP--LPEGIKVIGVSTLAEALEVV 453