HHsearch alignment for GI: 254780336 and conserved domain: COG0067
>COG0067 GltB Glutamate synthase domain 1 [Amino acid transport and metabolism].
Probab=99.83 E-value=9.2e-19 Score=153.50 Aligned_cols=161 Identities=20% Similarity=0.133 Sum_probs=120.8
Q ss_pred EEEECCCCHHHHCC---CHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCEEEECCCCEEEEEEEEEECCHHHHHHHHHHC
Q ss_conf 99804871676315---044432068767898751222689860027867874699719999965508789999999864
Q gi|254780336|r 56 HSERHLGLVGDHFT---KPETLSLLPGNMAIGHVRYSTTGDQIIRNVQPLFADLQVGGIAIAHNGNFTNGLTLRKKLISS 132 (488)
Q Consensus 56 ~~~K~~GlV~dvf~---~~~~l~~l~G~~~IGHvRYsT~G~~~~~n~QPf~~~~~~g~iaiaHNGnI~N~~eLr~~L~~~ 132 (488)
T Consensus 177 ~VYKG~~~p~~V~~~y~dl-~~~~~~s~~~l~HsRFSTNT~p~W~~AHPfr-------~-lvHNGEInT~~gN~nwm~ar 247 (371)
T COG0067 177 IVYKGVGLPEDVAEFYLDL-DDERYKSAIALVHTRFSTNTFPSWPLAHPFR-------L-LVHNGEINTYGGNRNWLEAR 247 (371)
T ss_pred EEEECCCCHHHHHHHHHHC-CCHHHCEEEEEEEECCCCCCCCCCCCCCCCE-------E-EEECCEECCCCCHHHHHHHH
T ss_conf 9993056899997777652-4422124689998006788899887678665-------3-33355021541179999985
Q ss_pred CCCCCCCCCHHHHHHHHHHHCCCC----CCHHHHH----------HHHHHHCCEEEEEEE---CCEEEEEEECCCCCEEE
Q ss_conf 982423430789889898730256----7056899----------998653043999963---99799998256654159
Q gi|254780336|r 133 GAIFQSTSDTEVILHLIARSQKNG----SCDRFID----------SLRHVQGAYAMLALT---RTKLIATRDPIGIRPLI 195 (488)
Q Consensus 133 g~~f~s~sDTEvI~~Li~~~~~~~----~~e~i~~----------~l~~l~Gayslv~l~---~~~l~~~RDp~GiRPL~ 195 (488)
T Consensus 248 ~~~~~s~~~~e~~a~l~p~~~~~~sDs~~~dn~lE~l~~~G~~~~~a~~m~~P~aw~~~~~~~~~~~afye~~~~l~epw 327 (371)
T COG0067 248 GYKFESPTDGEVLAKLLPILMRGGSDSASLDNALELLLLGGRDLYHAAMLLGPEAWVVGTDMDPEGRAFYEDHSALMEPW 327 (371)
T ss_pred HCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHCCCHHEECCCCCCCCEEEEEEHHHHCCCCC
T ss_conf 24010465288899987876024774111467898877518571457771696540337779844079886064477875
Q ss_pred EEECCCEEEEEECCHHCCCCCCCEEEECCCCEEEE
Q ss_conf 98269569998612001047874123317870799
Q gi|254780336|r 196 MGELHGKPIFCSETCALEITGAKYIRDVENGETIV 230 (488)
Q Consensus 196 ~G~~~~~~v~ASEs~Al~~ig~~~irdv~PGEiiv 230 (488)
T Consensus 328 dGpa~~~f~dgse~gA~ldrn-----gLrp~Ry~~ 357 (371)
T COG0067 328 DGPADIVFTDGSEEGAILDRN-----GLRPARYWI 357 (371)
T ss_pred CCCCCEEEEECCEEEEEECCC-----CCCCCEEEE
T ss_conf 077621687420554540237-----987542899