HHsearch alignment for GI: 254780336 and conserved domain: PRK01506
>PRK01506 consensus.
Probab=97.88 E-value=2e-05 Score=58.46 Aligned_cols=143 Identities=24% Similarity=0.230 Sum_probs=90.5
Q ss_pred HHHHHHHHCCCCCCCCCCCCCCHHH-HHHHHHHHCCCCEEHHEECCCCCCCEEEECCHHHHHHHHHHCCCCCHHHHCCCC
Q ss_conf 9999987486567720120012047-799999981996001001176532101106446777653201343245533893
Q gi|254780336|r 281 MGKNLAKESPVIADIVVPIPDGGVP-AAIGYAKESGIPFEQGIIRNHYVGRTFIEPSHHIRAFGVKLKHSANRTILAGKR 359 (488)
Q Consensus 281 lG~~La~~~~~~~DiV~~VPdsg~~-aA~gya~~~gip~~~~lvkn~y~gRtFI~p~~~~R~~~v~~K~~~~~~~i~gk~ 359 (488)
T Consensus 157 l~~~~~~~-~~-~~~vVVsPD~Ga~kra~~~a~~L~~~~~~-~~K~R~~------~~~------v~~--~~~~gdV~Gr~ 219 (317)
T PRK01506 157 LSDYFETK-GL-KDIVIVSPDHGGVTRARKMADRLKAPIAI-IDKRRPR------PNV------AEV--MNIIGNIEGKT 219 (317)
T ss_pred HHHHHHHC-CC-CCCEEEECCCHHHHHHHHHHHHCCCCEEE-EEEECCC------CCE------EEE--ECCCCCCCCCE
T ss_conf 88899854-88-77489904924899999999972996688-9864179------980------463--02456557962
Q ss_pred EEEEEHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCEECCCHHHHHHCCCCCHHHHHHHHCCCEEEEECHH
Q ss_conf 28974035333338889999985399789999658980588656500589788854669998899987099778883398
Q gi|254780336|r 360 VVLIDDSIVRGTTSVKIVQMIRSAGASEVHLRVASPMVLYPDFYGIDIPDPTALLANKCSSPQEMCNFIGVDSLGFLSVD 439 (488)
Q Consensus 360 vvlvDDSIVRGtT~k~iv~~lr~aGa~evh~ri~sPpi~~pc~yGid~p~~~eLia~~~~~~eei~~~igadsl~yls~e 439 (488)
T Consensus 220 vIIVDDiI~TGgTl~~aa~~Lk~~GA~~V~~~~THglfs~~A~~rl~~s~i~~iv~Tn--Tip-~p~~~~~~kl~vlsva 296 (317)
T PRK01506 220 AILIDDIIDTAGTITLAANALVENGASEVYACCTHPVLSGPAIERIQNSKIKELVVTN--SIV-LPEEKKIDKVHELSVA 296 (317)
T ss_pred EEEECCHHHCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHCCCCCEEEEEC--CCC-CCHHHCCCCCEEEEHH
T ss_conf 7875132213505999999998659975899997700681799998618998899938--844-8612337983998849
Q ss_pred HHHH
Q ss_conf 9998
Q gi|254780336|r 440 GLYN 443 (488)
Q Consensus 440 ~l~~ 443 (488)
T Consensus 297 ~llA 300 (317)
T PRK01506 297 PLIA 300 (317)
T ss_pred HHHH
T ss_conf 9999