HHsearch alignment for GI: 254780336 and conserved domain: PRK04117
>PRK04117 consensus.
Probab=97.98 E-value=1.4e-05 Score=59.67 Aligned_cols=130 Identities=22% Similarity=0.270 Sum_probs=83.2
Q ss_pred CCCCCCCCC-HHHHHHHHHHHCCCCEEHHEECCCCCCCEEEECCHHHHHHHHHHCCCCCHHHHCCCCEEEEEHHHHHHHH
Q ss_conf 720120012-0477999999819960010011765321011064467776532013432455338932897403533333
Q gi|254780336|r 294 DIVVPIPDG-GVPAAIGYAKESGIPFEQGIIRNHYVGRTFIEPSHHIRAFGVKLKHSANRTILAGKRVVLIDDSIVRGTT 372 (488)
Q Consensus 294 DiV~~VPds-g~~aA~gya~~~gip~~~~lvkn~y~gRtFI~p~~~~R~~~v~~K~~~~~~~i~gk~vvlvDDSIVRGtT 372 (488)
T Consensus 162 ~~vvVsPD~Ga~~ra~~~A~~Lg~~~~~-~~K~R~------~~~~------~--~~~~~~gdV~Gk~vIIVDDiI~TGgT 226 (309)
T PRK04117 162 NPIIASPDIGGVARARYFAKKLGLDMVI-VDKRRE------KANE------S--EVMNIIGDVKGKDVILVDDMIDTAGT 226 (309)
T ss_pred CCEEECCCCHHHHHHHHHHHHCCCCEEE-EEECCC------CCCC------C--CCCCCCCCCCCCEEEEECCHHHHHHH
T ss_conf 7469715931999999998742788799-851137------8885------4--32344566489868975725652799
Q ss_pred HHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCEECCCHHHHHHCCCCCHHHHHHHHCCCEEEEECHHHHHH
Q ss_conf 88899999853997899996589805886565005897888546699988999870997788833989998
Q gi|254780336|r 373 SVKIVQMIRSAGASEVHLRVASPMVLYPDFYGIDIPDPTALLANKCSSPQEMCNFIGVDSLGFLSVDGLYN 443 (488)
Q Consensus 373 ~k~iv~~lr~aGa~evh~ri~sPpi~~pc~yGid~p~~~eLia~~~~~~eei~~~igadsl~yls~e~l~~ 443 (488)
T Consensus 227 i~~aa~~L~~~GA~~V~~~~THglfs~~A~~rl~~s~i~~ivvTn--Tip-~~--~~~~kl~~isVa~llA 292 (309)
T PRK04117 227 IVKAAEALKEKGATSVMACCTHAVLSGPAYERIAKGALDELVVTN--TIP-LK--EELPKIKVLSVAPLFA 292 (309)
T ss_pred HHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHCCCCEEEECC--CCC-CC--CCCCCEEEEEHHHHHH
T ss_conf 999999998669974899994554583699999838997899828--987-74--4599809988399999