HHsearch alignment for GI: 254780336 and conserved domain: PRK06827

Probab=97.90  E-value=5.9e-05  Score=55.17  Aligned_cols=98  Identities=21%  Similarity=0.286  Sum_probs=71.0

Q ss_pred             CCCCCCCCCCHHH-HHHHHHHHCCCCEEHHEECCCCCCCEEEECCHHHHHHHHHHCCCCCHHHHCCCCEEEEEHHHHHHH
Q ss_conf             7720120012047-799999981996001001176532101106446777653201343245533893289740353333
Q gi|254780336|r  293 ADIVVPIPDGGVP-AAIGYAKESGIPFEQGIIRNHYVGRTFIEPSHHIRAFGVKLKHSANRTILAGKRVVLIDDSIVRGT  371 (488)
Q Consensus       293 ~DiV~~VPdsg~~-aA~gya~~~gip~~~~lvkn~y~gRtFI~p~~~~R~~~v~~K~~~~~~~i~gk~vvlvDDSIVRGt  371 (488)
T Consensus       208 ~~~vVVSPD~Ggv~RA~~~A~~L~~~lai-i~KrR~--~s~v~~~---~n~i~~~~--~lggdV~GK~~IIvDDmIdTgg  279 (381)
T PRK06827        208 ENLVVISPDTGAMDRAKYYSSVLKVPLGL-FYKRRD--YSTVVNG---KNPIVVHE--LLGRDVEGKDVFIVDDMIASGG  279 (381)
T ss_pred             CCCEEEECCCCCHHHHHHHHHHCCCCEEE-EEEECC--CCCCCCC---CCCEEEEE--EECCCCCCCEEEEECCCCCCCH
T ss_conf             77779926997389999999971989899-997646--7644566---78436752--4135567988999724314526


Q ss_pred             HHHHHHHHHHHCCCCEEEEEECCCCCC
Q ss_conf             388899999853997899996589805
Q gi|254780336|r  372 TSVKIVQMIRSAGASEVHLRVASPMVL  398 (488)
Q Consensus       372 T~k~iv~~lr~aGa~evh~ri~sPpi~  398 (488)
T Consensus       280 Tl~~aA~~Lk~~GA~~V~a~aTHgvfS  306 (381)
T PRK06827        280 SVLDAAKELKSRGAKKIICAVSFPFFT  306 (381)
T ss_pred             HHHHHHHHHHHCCCCEEEEEEECHHCC
T ss_conf             899999999987998899999736604