HHsearch alignment for GI: 254780336 and conserved domain: PRK08558

Probab=98.12  E-value=1.4e-05  Score=59.71  Aligned_cols=111  Identities=23%  Similarity=0.278  Sum_probs=83.2

Q ss_pred             HHHHHHHHHHC-CCCCCCCCCCCCCHHHHHHHHHHHCCCCEEHHEECCCCCC-CEEEECCHHHHHHHHHHCCCCCHHHHC
Q ss_conf             99999998748-6567720120012047799999981996001001176532-101106446777653201343245533
Q gi|254780336|r  279 RNMGKNLAKES-PVIADIVVPIPDGGVPAAIGYAKESGIPFEQGIIRNHYVG-RTFIEPSHHIRAFGVKLKHSANRTILA  356 (488)
Q Consensus       279 ~~lG~~La~~~-~~~~DiV~~VPdsg~~aA~gya~~~gip~~~~lvkn~y~g-RtFI~p~~~~R~~~v~~K~~~~~~~i~  356 (488)
T Consensus        97 ~l~~~~~a~rF~~~~idkVlT~at~GIplA~~~A~~l~vplviak-k~k~~~~~~~~~~~v~~~~~~~~tl~l~k~~l~~  175 (238)
T PRK08558         97 RLYEEYVAERFMGLRVDKVLTAATDGIPLAVAAASRFGADLVYAK-QYKEPGVEKFYEEYQYLASGRPVTLYLPAWALKR  175 (238)
T ss_pred             HHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHCCCEEEEE-ECCCCCCCCEEEEEEECCCCCEEEEEEEHHHCCC
T ss_conf             999999999817789858998468885399999998099789998-1367774652899997489957999955899799


Q ss_pred             CCCEEEEEHHHHHHHHHHHHHHHHHHCCCCEEEE
Q ss_conf             8932897403533333888999998539978999
Q gi|254780336|r  357 GKRVVLIDDSIVRGTTSVKIVQMIRSAGASEVHL  390 (488)
Q Consensus       357 gk~vvlvDDSIVRGtT~k~iv~~lr~aGa~evh~  390 (488)
T Consensus       176 g~~VLIVDD~~~tG~T~~~~~~l~~~~ga~v~G~  209 (238)
T PRK08558        176 GERVLIVDDIIRSGETQRALLELCRQAGADVVGV  209 (238)
T ss_pred             CCEEEEEHHHHHCCHHHHHHHHHHHHCCCEEEEE
T ss_conf             9869998356343738999999999869979999