HHsearch alignment for GI: 254780336 and conserved domain: PRK09213

Probab=97.39  E-value=0.00085  Score=46.93  Aligned_cols=109  Identities=21%  Similarity=0.351  Sum_probs=80.2

Q ss_pred             HHHHHHHHHHC-CCCCCCCCCCCCCHHHHHHHHHHHCCCCEEHHEECCCCCC-----CEEEEC-CHHHHHHHHHHCCCCC
Q ss_conf             99999998748-6567720120012047799999981996001001176532-----101106-4467776532013432
Q gi|254780336|r  279 RNMGKNLAKES-PVIADIVVPIPDGGVPAAIGYAKESGIPFEQGIIRNHYVG-----RTFIEP-SHHIRAFGVKLKHSAN  351 (488)
Q Consensus       279 ~~lG~~La~~~-~~~~DiV~~VPdsg~~aA~gya~~~gip~~~~lvkn~y~g-----RtFI~p-~~~~R~~~v~~K~~~~  351 (488)
T Consensus       116 ~~iG~~fA~~f~~~~id~VmTveTkGIplA~~vA~~L~VP~Vi~Rk~~kvTeG~tvsinYvSgss~ri~----tM~L-sk  190 (274)
T PRK09213        116 RKIGRIIASAFADKKIDAVMTVATKGIPLAYAVANYLNVPFVIVRRDSKVTEGSTVSINYVSGSSKRIE----TMSL-SK  190 (274)
T ss_pred             HHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHCCCEEEEECCCCCCCCCEEEEEEEECCCCEEE----EEEE-EH
T ss_conf             999999998751559988999833586189999998099899997678876797089999963665189----9998-76


Q ss_pred             HHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCEEEEEE
Q ss_conf             45533893289740353333388899999853997899996
Q gi|254780336|r  352 RTILAGKRVVLIDDSIVRGTTSVKIVQMIRSAGASEVHLRV  392 (488)
Q Consensus       352 ~~~i~gk~vvlvDDSIVRGtT~k~iv~~lr~aGa~evh~ri  392 (488)
T Consensus       191 r~L~~gsrVLiIDDFmk~Ggt~~Gm~~L~~Ef~a~vvGigV  231 (274)
T PRK09213        191 RSLKEGSNVLIVDDFMKAGGTINGMISLLKEFDAEVVGIGV  231 (274)
T ss_pred             HHCCCCCEEEEECHHHHCCCHHHHHHHHHHHCCCEEEEEEE
T ss_conf             33699983999834544760889999999971987978999