HHsearch alignment for GI: 254780336 and conserved domain: TIGR01743
>TIGR01743 purR_Bsub pur operon repressor; InterPro: IPR010078 This entry represents the pur operon repressor PurR of low-GC Gram-positive bacteria. This homodimeric repressor contains a large region homologous to phosphoribosyltransferases and is inhibited by 5-phosphoribosyl 1-pyrophosphate.; GO: 0003677 DNA binding, 0016564 transcription repressor activity, 0016481 negative regulation of transcription, 0045982 negative regulation of purine base metabolic process.
Probab=96.34 E-value=0.027 Score=36.19 Aligned_cols=104 Identities=22% Similarity=0.319 Sum_probs=80.6
Q ss_pred HHHHHHHHHHC-CCCCCCCCCCCCCHHHHHHHHHHHCCCCEEHHEECCCCCCCEEE-----ECCH--HHHHHHHHHCCCC
Q ss_conf 99999998748-65677201200120477999999819960010011765321011-----0644--6777653201343
Q gi|254780336|r 279 RNMGKNLAKES-PVIADIVVPIPDGGVPAAIGYAKESGIPFEQGIIRNHYVGRTFI-----EPSH--HIRAFGVKLKHSA 350 (488)
Q Consensus 279 ~~lG~~La~~~-~~~~DiV~~VPdsg~~aA~gya~~~gip~~~~lvkn~y~gRtFI-----~p~~--~~R~~~v~~K~~~ 350 (488)
T Consensus 114 ski~~ila~~F~d~~ID~V~TV~TKGvPLA~~~A~~LnV~lvivRkD~kvTEGStVSiNYVSGssG~~I~~M~La----- 188 (269)
T TIGR01743 114 SKIGKILASVFIDKEIDAVMTVETKGVPLAYAVAKVLNVPLVIVRKDSKVTEGSTVSINYVSGSSGDRIQKMSLA----- 188 (269)
T ss_pred HHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHCCCCEEEEECCCCEECCCEEEEEEEECCCCHHHHHHHHH-----
T ss_conf 778888754326855787899521882389899876496179998468121053289955676874367888888-----
Q ss_pred CHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCE
Q ss_conf 2455338932897403533333888999998539978
Q gi|254780336|r 351 NRTILAGKRVVLIDDSIVRGTTSVKIVQMIRSAGASE 387 (488)
Q Consensus 351 ~~~~i~gk~vvlvDDSIVRGtT~k~iv~~lr~aGa~e 387 (488)
T Consensus 189 rrSLk~GS~vL~vDDFmkaGGT~~Gm~~LL~EFda~l 225 (269)
T TIGR01743 189 RRSLKKGSKVLIVDDFMKAGGTVKGMIELLKEFDAEL 225 (269)
T ss_pred HHHHHHCCEEEEEECCCCCCCCHHHHHHHHHHHCCCC
T ss_conf 8888608908999535554870267888887627110