HHsearch alignment for GI: 254780336 and conserved domain: cd01907
>cd01907 GlxB Glutamine amidotransferases class-II (Gn-AT)_GlxB-type. GlxB is a glutamine amidotransferase-like protein of unknown function found in bacteria and archaea. GlxB has a structural fold similar to that of other class II glutamine amidotransferases including glucosamine-fructose 6-phosphate synthase (GLMS or GFAT), glutamine phosphoribosylpyrophosphate (Prpp) amidotransferase (GPATase), asparagine synthetase B (AsnB), beta lactam synthetase (beta-LS) and glutamate synthase (GltS). The GlxB fold is also somewhat similar to the Ntn (N-terminal nucleophile) hydrolase fold of the proteasomal alpha and beta subunits.
Probab=100.00 E-value=0 Score=424.35 Aligned_cols=211 Identities=26% Similarity=0.405 Sum_probs=187.2
Q ss_pred CEEEEEECCC---CHHHHHHHHHHHHHCCCC-CEEEEEEEEC---------CEEEEEECCCCHHHHCCCHHHHHHCCCCE
Q ss_conf 6599998185---336899999987731588-7027999979---------96999804871676315044432068767
Q gi|254780336|r 15 CGVFGILGHP---DAATLTAIGLHALQHRGQ-EATGIISFNG---------NKFHSERHLGLVGDHFTKPETLSLLPGNM 81 (488)
Q Consensus 15 CGI~Gi~~~~---~~~~~~~~gL~~LQHRGq-dsaGIa~~d~---------~~i~~~K~~GlV~dvf~~~~~l~~l~G~~ 81 (488)
T Consensus 1 CGI~Gi~~~~~~~~~~~~~~~~L~~LqhRGq~dsaGia~~~~~~~~~~~~g~~~~~~K~~G~v~~v~~~-~~l~~~~g~~ 79 (249)
T cd01907 1 CGIFGIMSKDGEPFVGALLVEMLDAMQERGPGDGAGFALYGDPDAFVYSSGKDMEVFKGVGYPEDIARR-YDLEEYKGYH 79 (249)
T ss_pred CEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCEEEECCCCEEEEECCCCHHHHHHH-HCCCCCCCCE
T ss_conf 979999858987548999999999970789714257999848984586347604788537889999866-4400267636
Q ss_pred EEEEEECCCCCCCCCCCCCCEEEECCCCEEEEEEEEEECCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCC-----
Q ss_conf 898751222689860027867874699719999965508789999999864982423430789889898730256-----
Q gi|254780336|r 82 AIGHVRYSTTGDQIIRNVQPLFADLQVGGIAIAHNGNFTNGLTLRKKLISSGAIFQSTSDTEVILHLIARSQKNG----- 156 (488)
Q Consensus 82 ~IGHvRYsT~G~~~~~n~QPf~~~~~~g~iaiaHNGnI~N~~eLr~~L~~~g~~f~s~sDTEvI~~Li~~~~~~~----- 156 (488)
T Consensus 80 ~IGH~RysT~g~~~~~~aqPf~----~~~~~lvhNG~i~N~~~lr~~l~~~g~~f~s~sDsEvi~~li~~~~~~~~~~~~ 155 (249)
T cd01907 80 WIAHTRQPTNSAVWWYGAHPFS----IGDIAVVHNGEISNYGSNREYLERFGYKFETETDTEVIAYYLDLLLRKGGLPLE 155 (249)
T ss_pred EEEEEECCCCCCCCCCCCCCCC----CCCEEEEECCCCCCHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHCCCCHHH
T ss_conf 7630503568998645777740----598868815413169999999997699723288089999999999873798378
Q ss_pred ----------------CCHHHHHHHHHHHCCEEEEEEECCEEEEEEECCCCCEEEEEECCCEEEEEECCHHCCCC---CC
Q ss_conf ----------------70568999986530439999639979999825665415998269569998612001047---87
Q gi|254780336|r 157 ----------------SCDRFIDSLRHVQGAYAMLALTRTKLIATRDPIGIRPLIMGELHGKPIFCSETCALEIT---GA 217 (488)
Q Consensus 157 ----------------~~e~i~~~l~~l~Gayslv~l~~~~l~~~RDp~GiRPL~~G~~~~~~v~ASEs~Al~~i---g~ 217 (488)
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ldG~yal~i~~~~~l~~~RD~~GiRPL~~g~~~~~~~vASEs~Al~~i~~~~~ 235 (249)
T cd01907 156 YYKHIIRMPEEERELLLALRLTYRLADLDGPFTIIVGTPDGFIVIRDRIKLRPAVVAETDDYVAIASEECAIREIPDRDN 235 (249)
T ss_pred HHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCEEEEEEECCCCCCEEEEEECCEEEEEECHHHHHHCCCCCC
T ss_conf 99986411111120018999998886157755999998994699981489998699984999999965999986048573
Q ss_pred CEEEECCCCEEEE
Q ss_conf 4123317870799
Q gi|254780336|r 218 KYIRDVENGETIV 230 (488)
Q Consensus 218 ~~irdv~PGEiiv 230 (488)
T Consensus 236 ~~v~e~~pGE~vv 248 (249)
T cd01907 236 AKVWEPRPGEYVI 248 (249)
T ss_pred CEEECCCCCEEEE
T ss_conf 3683378986896