HHsearch alignment for GI: 254780337 and conserved domain: COG2910
>COG2910 Putative NADH-flavin reductase [General function prediction only].
Probab=95.61 E-value=0.21 Score=29.44 Aligned_cols=176 Identities=15% Similarity=0.138 Sum_probs=109.0
Q ss_pred EEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCEEE
Q ss_conf 99938998688999999998899899997898999999999986499289998789999999999999999818987998
Q gi|254780337|r 21 ALVTGSSRGIGYYTALELARSGAYVIACGRSISQLEKLKNALQKINKKIDIFAFDLRDSNALELTKTYIAKRWGKLDILI 100 (257)
Q Consensus 21 alVTGas~GIG~a~a~~la~~G~~Vi~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iDilV 100 (257)
T Consensus 3 IaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~--------~~~~i~q~Difd~~~~a~-------~l~g~DaVI 67 (211)
T COG2910 3 IAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAAR--------QGVTILQKDIFDLTSLAS-------DLAGHDAVI 67 (211)
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEEECHHHCCCC--------CCCEEECCCCCCHHHHHH-------HHCCCCEEE
T ss_conf 78995374567999999986798048998076766522--------353020002227456676-------635876699
Q ss_pred ECCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHCCC--------CCCCH-HHHHH
Q ss_conf 7687588888867659999999999998999999999999998608986999788356478--------89836-88989
Q gi|254780337|r 101 ANAGILGSISPIWQIKEKSFADVISVNVMANWNIMRSFDPWLKKSHCGRAIILSSGAAYKC--------RPLWG-AYSAS 171 (257)
Q Consensus 101 NNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~l~~~~~~~m~~~~~G~IInisS~~g~~~--------~~~~~-~Y~as 171 (257)
T Consensus 68 sA~~~~-~~~~-----~~~~~k~-----------~~~li~~l~~agv~RllVVGGAGSL~id~g~rLvD~p~fP~ey~~~ 130 (211)
T COG2910 68 SAFGAG-ASDN-----DELHSKS-----------IEALIEALKGAGVPRLLVVGGAGSLEIDEGTRLVDTPDFPAEYKPE 130 (211)
T ss_pred EECCCC-CCCH-----HHHHHHH-----------HHHHHHHHHHCCCEEEEEECCCCCEEECCCCEEECCCCCCHHHHHH
T ss_conf 721578-8871-----5778889-----------9999999861597059998474205876884550589985667799
Q ss_pred HHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHH----------CCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 99999999999998544386997553288379779844----------14443245888899999999961
Q gi|254780337|r 172 KAAIEALARTWSKETVNTALRVINIDPGPTRTSMRAKA----------MPAEDPNTVPHPQKVAKIISFLC 232 (257)
Q Consensus 172 Kaal~~lt~~la~E~~~~gIrvn~I~PG~v~T~m~~~~----------~~~~~~~~~~~pediA~~v~fL~ 232 (257)
T Consensus 131 A~~~ae~L~~Lr~~---~~l~WTfvSPaa~f~PG-erTg~yrlggD~ll~n~~G~SrIS~aDYAiA~lDe~ 197 (211)
T COG2910 131 ALAQAEFLDSLRAE---KSLDWTFVSPAAFFEPG-ERTGNYRLGGDQLLVNAKGESRISYADYAIAVLDEL 197 (211)
T ss_pred HHHHHHHHHHHHHC---CCCCEEEECCHHHCCCC-CCCCCEEECCCEEEECCCCCEEEEHHHHHHHHHHHH
T ss_conf 98778999998635---67645996717845776-556856763635777488850344899999999877