HHsearch alignment for GI: 254780337 and conserved domain: PRK05134
>PRK05134 3-demethylubiquinone-9 3-methyltransferase; Provisional.
Probab=95.25 E-value=0.097 Score=31.76 Aligned_cols=167 Identities=18% Similarity=0.204 Sum_probs=95.8
Q ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHC
Q ss_conf 24889999938998688999999998899899997898999999999986499289998789999999999999999818
Q gi|254780337|r 15 NLDNRLALVTGSSRGIGYYTALELARSGAYVIACGRSISQLEKLKNALQKINKKIDIFAFDLRDSNALELTKTYIAKRWG 94 (257)
Q Consensus 15 ~l~~K~alVTGas~GIG~a~a~~la~~G~~Vi~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 94 (257)
T Consensus 46 ~l~G~~ILDVGCGgG~---lse~LAr~Ga~VtGID~S~~~I~~Ar~ha~~~~l~i~y~~~~~e~l~---------~~~~~ 113 (233)
T PRK05134 46 GLFGKRVLDVGCGGGI---LSESMARLGATVTGIDASEENIEVARLHALESGLKIDYRQITAEELA---------AEHPG 113 (233)
T ss_pred CCCCCEEEEECCCCCH---HHHHHHHCCCEEEEECCCHHHHHHHHHHHHHCCCCCEEEECCHHHHH---------HHCCC
T ss_conf 6689989997558971---12899967997999879989999999985644345116751476654---------30578
Q ss_pred CCCEEEECCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHCCCCCCCHHHHHHHHH
Q ss_conf 98799876875888888676599999999999989999999999999986089869997883564788983688989999
Q gi|254780337|r 95 KLDILIANAGILGSISPIWQIKEKSFADVISVNVMANWNIMRSFDPWLKKSHCGRAIILSSGAAYKCRPLWGAYSASKAA 174 (257)
Q Consensus 95 ~iDilVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~l~~~~~~~m~~~~~G~IInisS~~g~~~~~~~~~Y~asKaa 174 (257)
T Consensus 114 ~FDvV~~~-EVlEHV~--------d~-----------~~~l~~~~rlL--KPGG~l~lsT------iNrt~~S~l~~i~~ 165 (233)
T PRK05134 114 QFDVVTCM-EMLEHVP--------DP-----------ASFIRACAKLV--KPGGLVFFST------LNRNLKSYLLAIVG 165 (233)
T ss_pred CEEEEEEE-HHHHHCC--------CH-----------HHHHHHHHHHH--CCCCEEEEEC------CCCCHHHHHHHHHH
T ss_conf 63477442-1477538--------99-----------99999999973--8991499972------67898999999999
Q ss_pred HHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCHH-HCCCCCEEEECCC
Q ss_conf 9999999999854438699755328837977984414443245888899999999961975-6266857987687
Q gi|254780337|r 175 IEALARTWSKETVNTALRVINIDPGPTRTSMRAKAMPAEDPNTVPHPQKVAKIISFLCATQ-KIETGKLFSVPQN 248 (257)
Q Consensus 175 l~~lt~~la~E~~~~gIrvn~I~PG~v~T~m~~~~~~~~~~~~~~~pediA~~v~fL~s~~-~~~tG~~~~vdgG 248 (257)
T Consensus 166 AEyil~----------~----vP~g------------TH~w~kFi~P~el~~~l~~~-~~~~~~~~G~~ynp~~~ 213 (233)
T PRK05134 166 AEYILR----------M----LPKG------------THDYKKFIKPSELAAWLRQA-GLEVQDIKGLTYNPLTN 213 (233)
T ss_pred HHHHHC----------C----CCCC------------CCCHHHCCCHHHHHHHHHHC-CCEEEEEEEEEEECCCC
T ss_conf 988860----------4----9999------------85866679999999999987-99572100079965679