HHsearch alignment for GI: 254780337 and conserved domain: PRK10084
>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional.
Probab=99.55 E-value=7.4e-12 Score=99.46 Aligned_cols=213 Identities=17% Similarity=0.179 Sum_probs=140.4
Q ss_pred EEEECCCCHHHHHHHHHHHHCCCE-EEEEECC--HHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCC
Q ss_conf 999389986889999999988998-9999789--8999999999986499289998789999999999999999818987
Q gi|254780337|r 21 ALVTGSSRGIGYYTALELARSGAY-VIACGRS--ISQLEKLKNALQKINKKIDIFAFDLRDSNALELTKTYIAKRWGKLD 97 (257)
Q Consensus 21 alVTGas~GIG~a~a~~la~~G~~-Vi~~~r~--~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD 97 (257)
T Consensus 3 ILVTGg~GFIGs~l~~~Ll~~~~~~v~~vd~~~~~~~~~~~~~~--~~~~~~~~~~~Di~d~~~l~~~~~~~-----~~D 75 (352)
T PRK10084 3 ILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLADV--SDSERYVFEHADICDRAELDRIFAQH-----QPD 75 (352)
T ss_pred EEEECCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHH--HCCCCCEEEECCCCCHHHHHHHHHHH-----CCC
T ss_conf 99975100899999999997799889998479876778888876--30897179985678999999999973-----999
Q ss_pred EEEECCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HCCCCEEEEECCHHHCC--CC--------
Q ss_conf 9987687588888867659999999999998999999999999998-----60898699978835647--88--------
Q gi|254780337|r 98 ILIANAGILGSISPIWQIKEKSFADVISVNVMANWNIMRSFDPWLK-----KSHCGRAIILSSGAAYK--CR-------- 162 (257)
Q Consensus 98 ilVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~l~~~~~~~m~-----~~~~G~IInisS~~g~~--~~-------- 162 (257)
T Consensus 76 ~ViHlAA~~-~~~~----s~~~p~~~~~~Nv~gt~nllea~~~~~~~l~~~~~~~~rfv~~SS~~vYG~~~~p~~~~~~~ 150 (352)
T PRK10084 76 AVMHLAAES-HVDR----SITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVYGDLPHPDEVENSV 150 (352)
T ss_pred EEEECCCCC-CCCH----HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCEEECCCCCCCCCCCCC
T ss_conf 999977346-6561----33096786522378699999999998643200135405888710140346888863335665
Q ss_pred -----------CCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCH------H----HHHHCCCCCC------
Q ss_conf -----------983688989999999999999985443869975532883797------7----9844144432------
Q gi|254780337|r 163 -----------PLWGAYSASKAAIEALARTWSKETVNTALRVINIDPGPTRTS------M----RAKAMPAEDP------ 215 (257)
Q Consensus 163 -----------~~~~~Y~asKaal~~lt~~la~E~~~~gIrvn~I~PG~v~T~------m----~~~~~~~~~~------ 215 (257)
T Consensus 151 ~~p~~~e~~~~~p~~~Y~~sK~~~E~l~~~~~~~~---gl~~~i~R~~nvyGP~~~~~~~i~~~i~~~l~g~~i~i~G~G 227 (352)
T PRK10084 151 ELPLFTETTAYAPSSPYSASKASSDHLVRAWLRTY---GLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKG 227 (352)
T ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHC---CCCEEEEECCCEECCCCCCCHHHHHHHHHHHCCCEEEEECCC
T ss_conf 57765578999999989999999999999877651---587699852753086999603699999999809736881799
Q ss_pred ---CCCCCHHHHHHHHHHHHCHHHCCCCCEEEECCCCE
Q ss_conf ---45888899999999961975626685798768763
Q gi|254780337|r 216 ---NTVPHPQKVAKIISFLCATQKIETGKLFSVPQNRF 250 (257)
Q Consensus 216 ---~~~~~pediA~~v~fL~s~~~~~tG~~~~vdgG~~ 250 (257)
T Consensus 228 ~~~Rdf~yV~D~v~a~~~~~~~--~~~g~~yNig~~~~ 263 (352)
T PRK10084 228 DQIRDWLYVEDHARALYKVVTE--GKAGETYNIGGHNE 263 (352)
T ss_pred CEEEEEEEHHHHHHHHHHHHHC--CCCCCEEEECCCCC
T ss_conf 8567129759999999999866--99999599899997