HHsearch alignment for GI: 254780337 and conserved domain: TIGR01777
>TIGR01777 yfcH conserved hypothetical protein TIGR01777; InterPro: IPR010099 This entry represents proteins of unknown function including the Escherichia coli YfcH protein..
Probab=98.54 E-value=6.3e-07 Score=66.47 Aligned_cols=204 Identities=17% Similarity=0.139 Sum_probs=128.5
Q ss_pred EEEECC-CCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCEE
Q ss_conf 999389-9868899999999889989999789899999999998649928999878999999999999999981898799
Q gi|254780337|r 21 ALVTGS-SRGIGYYTALELARSGAYVIACGRSISQLEKLKNALQKINKKIDIFAFDLRDSNALELTKTYIAKRWGKLDIL 99 (257)
Q Consensus 21 alVTGa-s~GIG~a~a~~la~~G~~Vi~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iDil 99 (257)
T Consensus 1 ~litGgnTGfiG~~L~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~----W-~----~l~~~Dav 71 (307)
T TIGR01777 1 ILITGGNTGFIGRALTQRLTKSGHEVTILTRSPQAESNTKKVGYKNWLAEGKLGIVIAESG----W-S----ALEGADAV 71 (307)
T ss_pred CEECCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHCCCCCCCCCCCCCCCCCCHHC----C-C----CCCCCCEE
T ss_conf 9641533023789999999847998999961686432000255445555221245207220----5-6----67886279
Q ss_pred EECCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC----CCCEEEEECCHHHCCCCCCCHHHHHHH--H
Q ss_conf 8768758888886765999999999999899999999999999860----898699978835647889836889899--9
Q gi|254780337|r 100 IANAGILGSISPIWQIKEKSFADVISVNVMANWNIMRSFDPWLKKS----HCGRAIILSSGAAYKCRPLWGAYSASK--A 173 (257)
Q Consensus 100 VNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~l~~~~~~~m~~~----~~G~IInisS~~g~~~~~~~~~Y~asK--a 173 (257)
T Consensus 72 iNLAG~~-i~~P-~RWt~~~K~~i~~----SRi~~T~~L~~~i~~~~r~~~~P~~~isaSAvGyYG~~~~~~~tE~~~~~ 145 (307)
T TIGR01777 72 INLAGEP-IADP-KRWTEERKQEIRD----SRIDTTRALVEAIAAAPRAEQKPKVFISASAVGYYGHSEDRVFTEEDASG 145 (307)
T ss_pred EECCCCC-CCCC-CCCCHHHHHHHHH----CCHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEEECCCCCCEEECCCCCC
T ss_conf 8556888-5778-8878777575652----33478999999998465667887168850166630689982151166788
Q ss_pred HHHHHHHHHHHHHH-------HHCCEEEEECCCCCCCH---HHHHHCC------------CCCCCCCCCHHHHHHHHHHH
Q ss_conf 99999999999854-------43869975532883797---7984414------------44324588889999999996
Q gi|254780337|r 174 AIEALARTWSKETV-------NTALRVINIDPGPTRTS---MRAKAMP------------AEDPNTVPHPQKVAKIISFL 231 (257)
Q Consensus 174 al~~lt~~la~E~~-------~~gIrvn~I~PG~v~T~---m~~~~~~------------~~~~~~~~~pediA~~v~fL 231 (257)
T Consensus 146 ~~ddFla~lc~~WE~~A~~a~~~g~Rvv~~R~G~VLg~~GGaL~~m~~pf~~glGGplG~G~Q~~SWIH~~D~v~~I~~~ 225 (307)
T TIGR01777 146 PGDDFLAELCRDWEEAAQAAEQLGTRVVLLRTGIVLGPKGGALAKMLPPFRLGLGGPLGSGRQWFSWIHIEDLVQLILFA 225 (307)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 87772189999999985105336873898764134708987034545667651574236884145053588999999999
Q ss_pred HCHHHCCCC
Q ss_conf 197562668
Q gi|254780337|r 232 CATQKIETG 240 (257)
Q Consensus 232 ~s~~~~~tG 240 (257)
T Consensus 226 l~~-~~~~G 233 (307)
T TIGR01777 226 LEN-ASVSG 233 (307)
T ss_pred HHC-CCCCC
T ss_conf 855-89963