HHsearch alignment for GI: 254780337 and conserved domain: TIGR01832

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase; InterPro: IPR011286 This entry describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (IPR002198 from INTERPRO). This protein has been characterised in Erwinia chrysanthemi as an enzyme of pectin degradation .; GO: 0008678 2-deoxy-D-gluconate 3-dehydrogenase activity, 0051287 NAD binding.
Probab=100.00  E-value=0  Score=391.65  Aligned_cols=232  Identities=24%  Similarity=0.372  Sum_probs=219.3

Q ss_pred             ECCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEE-CCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHH
Q ss_conf             524889999938998688999999998899899997-8989999999999864992899987899999999999999998
Q gi|254780337|r   14 VNLDNRLALVTGSSRGIGYYTALELARSGAYVIACG-RSISQLEKLKNALQKINKKIDIFAFDLRDSNALELTKTYIAKR   92 (257)
Q Consensus        14 ~~l~~K~alVTGas~GIG~a~a~~la~~G~~Vi~~~-r~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~   92 (257)
T Consensus         1 FsL~GK~alvTGa~tGlGQG~a~gLA~AGadi~g~~~~~--~~~ET~~~v~~~Gr~f~~~~~Dl~~~~~~~~~~~~~~~~   78 (249)
T TIGR01832         1 FSLEGKVALVTGANTGLGQGIAVGLAEAGADIVGVGHIS--EPSETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVEE   78 (249)
T ss_pred             CCCCCCEEEEECCCCCHHHHHHHHHHHCCCEEEEECCCC--CHHHHHHHHHHHCCCEEHHHHHHHCHHHHHHHHHHHHHH
T ss_conf             987877688825988736899999985774178514312--638889999982521000212122321378999999986


Q ss_pred             HCCCCEEEECCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CCEEEEECCHHHCCCCCCCHHHHHH
Q ss_conf             189879987687588888867659999999999998999999999999998608-9869997883564788983688989
Q gi|254780337|r   93 WGKLDILIANAGILGSISPIWQIKEKSFADVISVNVMANWNIMRSFDPWLKKSH-CGRAIILSSGAAYKCRPLWGAYSAS  171 (257)
Q Consensus        93 ~g~iDilVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~l~~~~~~~m~~~~-~G~IInisS~~g~~~~~~~~~Y~as  171 (257)
T Consensus        79 ~g~~DiLVNNAGIIrR-~da~~f~e~dWd~V~nvNlk~vF~l~q~~a~~~l~~G~~GkiiNIAS~LSFQGGirVPsYTAS  157 (249)
T TIGR01832        79 FGKIDILVNNAGIIRR-EDAVEFSEKDWDDVMNVNLKSVFFLTQAAAKQFLKQGRGGKIINIASLLSFQGGIRVPSYTAS  157 (249)
T ss_pred             HCCCCEEEECCCHHHH-HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHCCCCCCHHHHHH
T ss_conf             1886567607422104-577515614457999866899999999999999964899505751423442267551246666


Q ss_pred             HHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCH----------HHHHHCCCCCCCCCCCHHHHHHHHHHHHCHHH-CCCC
Q ss_conf             999999999999985443869975532883797----------79844144432458888999999999619756-2668
Q gi|254780337|r  172 KAAIEALARTWSKETVNTALRVINIDPGPTRTS----------MRAKAMPAEDPNTVPHPQKVAKIISFLCATQK-IETG  240 (257)
Q Consensus       172 Kaal~~lt~~la~E~~~~gIrvn~I~PG~v~T~----------m~~~~~~~~~~~~~~~pediA~~v~fL~s~~~-~~tG  240 (257)
T Consensus       158 K~~v~GlTk~lAnEWa~~ginVNAIAPGY~~T~NT~~lRaD~~Rn~~Il~RIPaGrWG~p~D~~G~aVFLaS~ASdYv~G  237 (249)
T TIGR01832       158 KHGVAGLTKLLANEWAAKGINVNAIAPGYMETNNTQALRADEDRNAAILERIPAGRWGTPEDLGGAAVFLASSASDYVNG  237 (249)
T ss_pred             HHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC
T ss_conf             77777789999989987388153115887664551542031777899973178999848400030688887755434365


Q ss_pred             CEEEECCC
Q ss_conf             57987687
Q gi|254780337|r  241 KLFSVPQN  248 (257)
Q Consensus       241 ~~~~vdgG  248 (257)
T Consensus       238 ~~l~VDGG  245 (249)
T TIGR01832       238 AILAVDGG  245 (249)
T ss_pred             EEEEECCC
T ss_conf             06620773