HHsearch alignment for GI: 254780337 and conserved domain: TIGR02622
>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase; InterPro: IPR013445 This entry contains CDP-glucose 4,6-dehydratases from a variety of Gram-negative and Gram-positive bacteria. Members are typically encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate CDP-D-glucose. This is used by the proteins in this entry to produce CDP-4-keto-6-deoxyglucose..
Probab=99.09 E-value=1.2e-09 Score=84.68 Aligned_cols=172 Identities=21% Similarity=0.232 Sum_probs=129.9
Q ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCE------EEEECCCCCHHHHHHHHHHH
Q ss_conf 488999993899868899999999889989999789899999999998649928------99987899999999999999
Q gi|254780337|r 16 LDNRLALVTGSSRGIGYYTALELARSGAYVIACGRSISQLEKLKNALQKINKKI------DIFAFDLRDSNALELTKTYI 89 (257)
Q Consensus 16 l~~K~alVTGas~GIG~a~a~~la~~G~~Vi~~~r~~~~l~~~~~~~~~~g~~~------~~~~~Dv~d~~~v~~~~~~~ 89 (257)
T Consensus 2 w~gKkVl~TGHTGFKGSWL~lWL~~lGA~V~GYSL~P~t~PnlFe~l~l-~~~~~~~Wyf~~~~gDIrD~~~L~~~~~~~ 80 (361)
T TIGR02622 2 WQGKKVLITGHTGFKGSWLSLWLLELGAEVAGYSLDPPTSPNLFELLNL-AKKIKDSWYFSSIFGDIRDAAKLEKAIAEF 80 (361)
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHH-HHHHHCCEEEEEEEECCCCHHHHHHHHHHC
T ss_conf 5686789845786425589999984796798971688788405557525-424323505542330323278999999972
Q ss_pred HHHHCCCCEEEECCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCH---------HHCC
Q ss_conf 9981898799876875888888676599999999999989999999999999986089869997883---------5647
Q gi|254780337|r 90 AKRWGKLDILIANAGILGSISPIWQIKEKSFADVISVNVMANWNIMRSFDPWLKKSHCGRAIILSSG---------AAYK 160 (257)
Q Consensus 90 ~~~~g~iDilVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~l~~~~~~~m~~~~~G~IInisS~---------~g~~ 160 (257)
T Consensus 81 -----~PeIvFHlAA-----QPLVr~SY~~P~~Tf~TNVmGT~~lL-ea~r~~--~~~~a~v~vTsDK~Y~N~EW~wgYR 147 (361)
T TIGR02622 81 -----KPEIVFHLAA-----QPLVRKSYADPLETFETNVMGTVNLL-EAIRAI--KSVKAVVLVTSDKVYENKEWVWGYR 147 (361)
T ss_pred -----CCCEEEHHHH-----HHHHHHHHHCHHHHEEEHHHHHHHHH-HHHHHC--CCCEEEEEEECCEEECCCCCCCCCC
T ss_conf -----8989833354-----27889867320202220032225778-899746--9956999861672330787887523
Q ss_pred ---CCCCCHHHHHHHHHHHHHHHHHHHHHHH-------HCCEEEEECCCCC
Q ss_conf ---8898368898999999999999998544-------3869975532883
Q gi|254780337|r 161 ---CRPLWGAYSASKAAIEALARTWSKETVN-------TALRVINIDPGPT 201 (257)
Q Consensus 161 ---~~~~~~~Y~asKaal~~lt~~la~E~~~-------~gIrvn~I~PG~v 201 (257)
T Consensus 148 E~D~LGGhDPYS~SKAcAELv~~syR~SF~~~~~f~~~h~~~iAsaRAGNV 198 (361)
T TIGR02622 148 ETDPLGGHDPYSSSKACAELVIASYRSSFFGEANFQSTHGIKIASARAGNV 198 (361)
T ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECCC
T ss_conf 247887716775328999999999986068888755468636899860640