HHsearch alignment for GI: 254780337 and conserved domain: TIGR03325
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=100.00 E-value=0 Score=417.07 Aligned_cols=236 Identities=22% Similarity=0.299 Sum_probs=210.3
Q ss_pred ECCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHH
Q ss_conf 52488999993899868899999999889989999789899999999998649928999878999999999999999981
Q gi|254780337|r 14 VNLDNRLALVTGSSRGIGYYTALELARSGAYVIACGRSISQLEKLKNALQKINKKIDIFAFDLRDSNALELTKTYIAKRW 93 (257)
Q Consensus 14 ~~l~~K~alVTGas~GIG~a~a~~la~~G~~Vi~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 93 (257)
T Consensus 1 M~L~gKvalITGgs~GIG~aia~~~a~~Ga~V~i~~r~~~~l~~~~~---~~g~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 77 (262)
T TIGR03325 1 MRLKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEA---AHGDAVVGVEGDVRSLDDHKEAVARCVAAF 77 (262)
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH---HCCCCEEEEECCCCCHHHHHHHHHHHHHHH
T ss_conf 99899889990678789999999999879999999899899999998---679967999845799999999999999984
Q ss_pred CCCCEEEECCCCCCCCCCHHHCC----HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHCCCCCCCHHHH
Q ss_conf 89879987687588888867659----99999999999899999999999999860898699978835647889836889
Q gi|254780337|r 94 GKLDILIANAGILGSISPIWQIK----EKSFADVISVNVMANWNIMRSFDPWLKKSHCGRAIILSSGAAYKCRPLWGAYS 169 (257)
Q Consensus 94 g~iDilVNNAGi~~~~~~~~~~~----~e~~~~~~~vNl~g~~~l~~~~~~~m~~~~~G~IInisS~~g~~~~~~~~~Y~ 169 (257)
T Consensus 78 G~iDiLVnNAG~~~~~~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~~-g~iI~~~S~~~~~~~~~~~~Y~ 156 (262)
T TIGR03325 78 GKIDCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVASR-GSVIFTISNAGFYPNGGGPLYT 156 (262)
T ss_pred CCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CCEEEEEECCCCCCCCCCHHHH
T ss_conf 998889972651687764345862414999999999974999999999999999709-8189998710324889966899
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHH--------HHC----------CCCCCCCCCCHHHHHHHHHHH
Q ss_conf 89999999999999985443869975532883797798--------441----------444324588889999999996
Q gi|254780337|r 170 ASKAAIEALARTWSKETVNTALRVINIDPGPTRTSMRA--------KAM----------PAEDPNTVPHPQKVAKIISFL 231 (257)
Q Consensus 170 asKaal~~lt~~la~E~~~~gIrvn~I~PG~v~T~m~~--------~~~----------~~~~~~~~~~pediA~~v~fL 231 (257)
T Consensus 157 asKaal~~ltr~lA~e~~~~-IRVNaV~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~peeia~av~fL 235 (262)
T TIGR03325 157 AAKHAVVGLVKELAFELAPY-VRVNGVAPGGMSSDLRGPKSLGMADKSISTVPLGDMLKSVLPIGRMPDAEEYTGAYVFF 235 (262)
T ss_pred HHHHHHHHHHHHHHHHHCCC-CEEEEEEECCCCCCCCCCCCCCHHHHHHCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHH
T ss_conf 99999999999999997599-78999953788879867544313555421105899997079989983999999999998
Q ss_pred HCH-HH-CCCCCEEEECCCCEECCC
Q ss_conf 197-56-266857987687631543
Q gi|254780337|r 232 CAT-QK-IETGKLFSVPQNRFVNYL 254 (257)
Q Consensus 232 ~s~-~~-~~tG~~~~vdgG~~~n~~ 254 (257)
T Consensus 236 ~s~~~s~~iTG~~l~VDGG~~~~~~ 260 (262)
T TIGR03325 236 ATRGDTVPATGAVLNYDGGMGVRGF 260 (262)
T ss_pred CCCCHHCCEECCEEEECCCCCCCEE
T ss_conf 1980226945868897947106730