HHsearch alignment for GI: 254780337 and conserved domain: cd00704
>cd00704 MDH Malate dehydrogenase. Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=92.32 E-value=0.98 Score=25.04 Aligned_cols=149 Identities=15% Similarity=0.125 Sum_probs=82.2
Q ss_pred EEEECCCCHHHHHHHHHHHHCCC-------EEEEEECCH--HHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 99938998688999999998899-------899997898--999999999986499289998789999999999999999
Q gi|254780337|r 21 ALVTGSSRGIGYYTALELARSGA-------YVIACGRSI--SQLEKLKNALQKINKKIDIFAFDLRDSNALELTKTYIAK 91 (257)
Q Consensus 21 alVTGas~GIG~a~a~~la~~G~-------~Vi~~~r~~--~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~ 91 (257)
T Consensus 3 V~IiGA~G~IG~~la~~l~~~~l~g~~~~i~l~L~Di~~~~~~~~G~~mdl~~~a~---~~~~~v~~~~-------~~~~ 72 (323)
T cd00704 3 VLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAMKALEGVVMELQDCAF---PLLKGVVITT-------DPEE 72 (323)
T ss_pred EEEECCCCHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHCCC---CCCCCEEECC-------CHHH
T ss_conf 99989997899999999972863699860089997588865553148786653466---5558748428-------8589
Q ss_pred HHCCCCEEEECCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--CCCEEEEECCHHHCCCCCCCHHHH
Q ss_conf 818987998768758888886765999999999999899999999999999860--898699978835647889836889
Q gi|254780337|r 92 RWGKLDILIANAGILGSISPIWQIKEKSFADVISVNVMANWNIMRSFDPWLKKS--HCGRAIILSSGAAYKCRPLWGAYS 169 (257)
Q Consensus 92 ~~g~iDilVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~l~~~~~~~m~~~--~~G~IInisS~~g~~~~~~~~~Y~ 169 (257)
T Consensus 73 ~~~~aDvViitaG~prk--p--G~tR~D---Ll~~N~~I----~k~~~~~i~~~a~p~~~vivvsN-----P-vD~~~~v 135 (323)
T cd00704 73 AFKDVDVAILVGAFPRK--P--GMERAD---LLRKNAKI----FKEQGEALNKVAKPTVKVLVVGN-----P-ANTNALI 135 (323)
T ss_pred HHCCCCEEEECCCCCCC--C--CCCHHH---HHHHHHHH----HHHHHHHHHHHCCCCCEEEEECC-----C-CHHHHHH
T ss_conf 83799889982787889--9--982799---99874899----99999999851799838999578-----6-4689999
Q ss_pred HHHHH---------------HHHHHHHHHHHHH--HHCCEEEEE
Q ss_conf 89999---------------9999999999854--438699755
Q gi|254780337|r 170 ASKAA---------------IEALARTWSKETV--NTALRVINI 196 (257)
Q Consensus 170 asKaa---------------l~~lt~~la~E~~--~~gIrvn~I 196 (257)
T Consensus 136 ~~k~sg~~~~~~i~~~t~LDsaR~r~~la~~l~v~~~~V~~~iI 179 (323)
T cd00704 136 ALKNAPNLPPKNFTALTRLDHNRAKAQVARKLGVRVSDVKNVII 179 (323)
T ss_pred HHHHCCCCCCCEEEEEEEHHHHHHHHHHHHHHCCCHHHCEEEEE
T ss_conf 99976999824799965279999999999997839789278799