BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= gi|254780338|ref|YP_003064751.1| hypothetical protein CLIBASIA_01115 [Candidatus Liberibacter asiaticus str. psy62] (129 letters) Database: nr 14,124,377 sequences; 4,842,793,630 total letters Searching..................................................done >gi|148974191|ref|ZP_01811724.1| hypothetical protein VSWAT3_13727 [Vibrionales bacterium SWAT-3] gi|145965888|gb|EDK31136.1| hypothetical protein VSWAT3_13727 [Vibrionales bacterium SWAT-3] Length = 179 Score = 163 bits (412), Expect = 9e-39, Method: Composition-based stats. Identities = 49/132 (37%), Positives = 77/132 (58%), Gaps = 3/132 (2%) Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60 M+ GF+ N++ G + RHY I+++GA+ + RQV +H++PG GY P+FGMH YTW Sbjct: 48 MVAFGFMLNVVYGPQPRHYGIVLIGALYGVATSLRQVSLHVIPGTPGYGSPIFGMHYYTW 107 Query: 61 SLIFSLVIILFISVLMLFDTAE---IKVAKSPVREIAIYLFVFLIFANFISTILECGLTQ 117 + + IL ++V+++ E S + +A L + ++ N I+T +ECG Q Sbjct: 108 AFVLFAATILAVAVILILTNKEPSQEAYKMSNLGRVACLLAIVVVALNAIATFVECGPYQ 167 Query: 118 CFDNPTFYQLLN 129 C DNP Y LLN Sbjct: 168 CPDNPVSYWLLN 179 >gi|330445116|ref|ZP_08308768.1| putative membrane protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328489307|dbj|GAA03265.1| putative membrane protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 182 Score = 160 bits (406), Expect = 5e-38, Method: Composition-based stats. Identities = 44/132 (33%), Positives = 74/132 (56%), Gaps = 3/132 (2%) Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60 M+ GF+ N++ G +QRHY ++++GA+ A RQV +H++PG G+ P+ GMH YTW Sbjct: 48 MVMFGFMLNVVYGTQQRHYGVILVGALFGAATALRQVSLHVIPGTPGFGSPILGMHYYTW 107 Query: 61 SLIFSLVIILFISVLMLFDTAE---IKVAKSPVREIAIYLFVFLIFANFISTILECGLTQ 117 + + + I +++L++ + + + L + + N +ST LECG Q Sbjct: 108 AFVIFGMTIAGVALLLMLWNKDWTSENYQMNKFGKFVCILAIVAVLINVVSTFLECGPYQ 167 Query: 118 CFDNPTFYQLLN 129 C DNP Y LL+ Sbjct: 168 CPDNPVSYWLLD 179 >gi|269962996|ref|ZP_06177333.1| conserved hypothetical protein [Vibrio harveyi 1DA3] gi|269832239|gb|EEZ86361.1| conserved hypothetical protein [Vibrio harveyi 1DA3] Length = 179 Score = 160 bits (406), Expect = 5e-38, Method: Composition-based stats. Identities = 48/132 (36%), Positives = 74/132 (56%), Gaps = 3/132 (2%) Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60 MI GFL N++ G + RHY ++++GA+ + RQV +H++PG GY P+FGMH YTW Sbjct: 48 MIMFGFLLNVVYGPRSRHYGVVLIGALYGVATSLRQVSLHVIPGTPGYGSPIFGMHYYTW 107 Query: 61 SLIFSLVIILFISVLMLFDTAE---IKVAKSPVREIAIYLFVFLIFANFISTILECGLTQ 117 + + + I ++V+++ + E S + I L + ++ N I T ECG Q Sbjct: 108 AFVLFVATIFAVAVILMLTSKEESPEPYEMSNLGRITCLLAISVVALNVIGTFAECGPYQ 167 Query: 118 CFDNPTFYQLLN 129 C DNP Y L N Sbjct: 168 CPDNPESYWLFN 179 >gi|84386571|ref|ZP_00989598.1| hypothetical protein V12B01_17856 [Vibrio splendidus 12B01] gi|84378676|gb|EAP95532.1| hypothetical protein V12B01_17856 [Vibrio splendidus 12B01] Length = 183 Score = 160 bits (405), Expect = 7e-38, Method: Composition-based stats. Identities = 46/132 (34%), Positives = 73/132 (55%), Gaps = 3/132 (2%) Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60 M+ GF+ N++ G + RHY ++++GA+ + RQV +H++PG GY P+ GMH YTW Sbjct: 48 MVAFGFMLNVVYGPQSRHYGVILIGALYGVATSLRQVSLHVIPGTPGYGSPILGMHYYTW 107 Query: 61 SLIFSLVIILFISVLMLFDTAE---IKVAKSPVREIAIYLFVFLIFANFISTILECGLTQ 117 + + + IL +SV+++ I L + ++ N I+T +ECG Q Sbjct: 108 AFVLFVATILAVSVILMLTNKTESHEPYKMGNFGRIVCLLAIAVVALNAIATFVECGPYQ 167 Query: 118 CFDNPTFYQLLN 129 C DNP Y LLN Sbjct: 168 CPDNPVSYWLLN 179 >gi|90580939|ref|ZP_01236740.1| hypothetical protein VAS14_20796 [Vibrio angustum S14] gi|90437817|gb|EAS63007.1| hypothetical protein VAS14_20796 [Vibrio angustum S14] Length = 182 Score = 158 bits (400), Expect = 2e-37, Method: Composition-based stats. Identities = 47/132 (35%), Positives = 74/132 (56%), Gaps = 3/132 (2%) Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60 M+ GF+ N++ G +QRHY ++++GA+ A RQV +H++PG G+ P+ GMH YTW Sbjct: 48 MVMFGFMLNVVYGTQQRHYGVILVGALFGAATALRQVSLHVIPGTPGFGSPILGMHYYTW 107 Query: 61 SLIFSLVIILFISVLMLFDTAE---IKVAKSPVREIAIYLFVFLIFANFISTILECGLTQ 117 + + + I +++L+L E + + L + + N IST LECG Q Sbjct: 108 AFVIFAMAIAGVALLLLLWNKEWTSENYQMNKFGKFVCILAIVAVLINVISTFLECGPYQ 167 Query: 118 CFDNPTFYQLLN 129 C DNP Y LL+ Sbjct: 168 CPDNPVSYWLLD 179 >gi|89076419|ref|ZP_01162744.1| hypothetical protein SKA34_21524 [Photobacterium sp. SKA34] gi|89047887|gb|EAR53480.1| hypothetical protein SKA34_21524 [Photobacterium sp. SKA34] Length = 182 Score = 158 bits (399), Expect = 3e-37, Method: Composition-based stats. Identities = 46/132 (34%), Positives = 74/132 (56%), Gaps = 3/132 (2%) Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60 M+ GF+ N++ G +QRHY ++++GA+ A RQV +H++PG G+ P+ GMH YTW Sbjct: 48 MVMFGFMLNVVYGTQQRHYGVILVGALFGAATALRQVSLHVIPGTPGFGSPILGMHYYTW 107 Query: 61 SLIFSLVIILFISVLMLFDTAE---IKVAKSPVREIAIYLFVFLIFANFISTILECGLTQ 117 + + + I +++L+L E + + L + + N IST +ECG Q Sbjct: 108 AFVIFAMAIAGVALLLLLWNKEWTSENYQMNKFGKFVCILAIVAVLINVISTFIECGPYQ 167 Query: 118 CFDNPTFYQLLN 129 C DNP Y LL+ Sbjct: 168 CPDNPVSYWLLD 179 >gi|153832246|ref|ZP_01984913.1| putative membrane protein [Vibrio harveyi HY01] gi|148871557|gb|EDL70412.1| putative membrane protein [Vibrio harveyi HY01] Length = 179 Score = 158 bits (399), Expect = 3e-37, Method: Composition-based stats. Identities = 48/132 (36%), Positives = 73/132 (55%), Gaps = 3/132 (2%) Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60 MI GFL N++ G + RHY ++++GA+ + RQV +H++PG GY P+FGMH YTW Sbjct: 48 MIMFGFLLNVVYGPQSRHYGVVLIGALYGVATSLRQVSLHVIPGTPGYGSPIFGMHYYTW 107 Query: 61 SLIFSLVIILFISVLMLFDTAE---IKVAKSPVREIAIYLFVFLIFANFISTILECGLTQ 117 + + + I ++V+++ E S + I L + ++ N I T ECG Q Sbjct: 108 AFVLFVATIFAVAVILMLTNKEESSEPYEMSNLGRITCLLAISVVALNVIGTFAECGPYQ 167 Query: 118 CFDNPTFYQLLN 129 C DNP Y L N Sbjct: 168 CPDNPESYWLFN 179 >gi|209809797|ref|YP_002265336.1| membrane protein [Aliivibrio salmonicida LFI1238] gi|208011360|emb|CAQ81816.1| membrane protein [Aliivibrio salmonicida LFI1238] Length = 182 Score = 158 bits (399), Expect = 4e-37, Method: Composition-based stats. Identities = 46/132 (34%), Positives = 77/132 (58%), Gaps = 3/132 (2%) Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60 M+ GF+ N+I G +QRHY ++++GA+ A RQV +H++PG G+ P+ GMH YTW Sbjct: 48 MVMFGFMLNIIYGTQQRHYGVILVGALFGAATALRQVSLHVIPGTPGFGSPILGMHYYTW 107 Query: 61 SLIFSLVIILFISVLMLFDTAE---IKVAKSPVREIAIYLFVFLIFANFISTILECGLTQ 117 + + ++ I+ ++VL++ + + + A L + + N +ST +ECG Q Sbjct: 108 AFVIFMMAIVGVAVLLMLWNNDWSTDTYQMNAFGKFACVLAIVAVLVNVLSTFVECGPYQ 167 Query: 118 CFDNPTFYQLLN 129 C DNP Y LL+ Sbjct: 168 CPDNPVSYWLLD 179 >gi|149187374|ref|ZP_01865672.1| hypothetical protein VSAK1_17662 [Vibrio shilonii AK1] gi|148838910|gb|EDL55849.1| hypothetical protein VSAK1_17662 [Vibrio shilonii AK1] Length = 182 Score = 157 bits (398), Expect = 4e-37, Method: Composition-based stats. Identities = 45/132 (34%), Positives = 75/132 (56%), Gaps = 3/132 (2%) Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60 M+ GFL N++ G +QRHY ++++GA+ A RQV +H++PG G+ P+ GMH YTW Sbjct: 48 MVMFGFLLNIVYGTEQRHYGVILVGALFGAATALRQVSLHVIPGTPGFGSPILGMHYYTW 107 Query: 61 SLIFSLVIILFISVLMLFDTA---EIKVAKSPVREIAIYLFVFLIFANFISTILECGLTQ 117 + + + I +++L++ + + S + L + + N +ST +ECG Q Sbjct: 108 AFVIFAMTIAGVALLLVLWNKDWSDDQYQMSMFGRVVCILAIVAVAINVLSTFIECGPYQ 167 Query: 118 CFDNPTFYQLLN 129 C DNP Y LL+ Sbjct: 168 CPDNPVSYWLLD 179 >gi|260779144|ref|ZP_05888036.1| putative inner membrane protein [Vibrio coralliilyticus ATCC BAA-450] gi|260605308|gb|EEX31603.1| putative inner membrane protein [Vibrio coralliilyticus ATCC BAA-450] Length = 179 Score = 157 bits (397), Expect = 6e-37, Method: Composition-based stats. Identities = 47/132 (35%), Positives = 72/132 (54%), Gaps = 3/132 (2%) Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60 M+ GFL N+ G +QRHY ++++GA+ A RQV +H++PG GY +FGMH YTW Sbjct: 48 MVMFGFLLNVKYGPQQRHYGVVLIGALFGAATALRQVSLHVIPGTPGYGSAIFGMHYYTW 107 Query: 61 SLIFSLVIILFISVLMLFDT---AEIKVAKSPVREIAIYLFVFLIFANFISTILECGLTQ 117 + + IL +++L++ S + L + ++ N +ST +ECG Q Sbjct: 108 AFVLFSATILAVAILLMLWNEAWNTEPFEMSKIGRWVCLLAISVVALNMLSTFVECGPYQ 167 Query: 118 CFDNPTFYQLLN 129 C DNP Y L N Sbjct: 168 CPDNPVSYWLFN 179 >gi|156977740|ref|YP_001448646.1| hypothetical protein VIBHAR_06528 [Vibrio harveyi ATCC BAA-1116] gi|156529334|gb|ABU74419.1| hypothetical protein VIBHAR_06528 [Vibrio harveyi ATCC BAA-1116] Length = 179 Score = 157 bits (397), Expect = 6e-37, Method: Composition-based stats. Identities = 47/132 (35%), Positives = 74/132 (56%), Gaps = 3/132 (2%) Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60 MI GFL N++ G + RHY ++++GA+ + RQV +H++PG GY P+FGMH YTW Sbjct: 48 MIMFGFLLNVVYGPQSRHYGVVLIGALYGVATSLRQVSLHVIPGTPGYGSPIFGMHYYTW 107 Query: 61 SLIFSLVIILFISVLMLF---DTAEIKVAKSPVREIAIYLFVFLIFANFISTILECGLTQ 117 + + + I ++V+++ + + S + I L + ++ N I T ECG Q Sbjct: 108 AFVLFVATIFAVAVILMLTSREESPEPYEMSNLGRITCLLAISVVALNVIGTFAECGPYQ 167 Query: 118 CFDNPTFYQLLN 129 C DNP Y L N Sbjct: 168 CPDNPESYWLFN 179 >gi|90580693|ref|ZP_01236497.1| hypothetical protein VAS14_16187 [Vibrio angustum S14] gi|90438150|gb|EAS63337.1| hypothetical protein VAS14_16187 [Vibrio angustum S14] Length = 179 Score = 156 bits (394), Expect = 1e-36, Method: Composition-based stats. Identities = 44/132 (33%), Positives = 72/132 (54%), Gaps = 3/132 (2%) Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60 M+ GF+ N++ G + RHY ++++GA+ + RQV +H++PG GY P+FGMH YTW Sbjct: 48 MVAFGFMLNVVYGPQSRHYGVVLIGALYGIATSLRQVSLHVIPGTPGYGSPIFGMHYYTW 107 Query: 61 SLIFSLVIILFISVLMLFDTAEIKVAKSP---VREIAIYLFVFLIFANFISTILECGLTQ 117 + + + I ++V++L + I + ++ N I+T +ECG Q Sbjct: 108 AFVLFAITIFGVAVILLLTNKDESHESYNITHFGRIVCVFAIVVVALNVIATFVECGPYQ 167 Query: 118 CFDNPTFYQLLN 129 C DNP Y L N Sbjct: 168 CPDNPVSYWLFN 179 >gi|89072064|ref|ZP_01158660.1| hypothetical protein SKA34_08518 [Photobacterium sp. SKA34] gi|89052165|gb|EAR57616.1| hypothetical protein SKA34_08518 [Photobacterium sp. SKA34] Length = 179 Score = 155 bits (393), Expect = 1e-36, Method: Composition-based stats. Identities = 43/132 (32%), Positives = 72/132 (54%), Gaps = 3/132 (2%) Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60 M+ GF+ N++ G + RHY ++++GA+ + RQV +H++PG GY P+FGMH YTW Sbjct: 48 MVAFGFMLNVVYGPQSRHYGVVLIGALYGIATSLRQVSLHVIPGTPGYGSPIFGMHYYTW 107 Query: 61 SLIFSLVIILFISVLMLFDTAEIKVAKSP---VREIAIYLFVFLIFANFISTILECGLTQ 117 + + + + ++V++L + I + ++ N I+T +ECG Q Sbjct: 108 AFVLFAITVFGVAVILLLTNKDESHESYNITHFGRIVCVFAIVVVALNVIATFVECGPYQ 167 Query: 118 CFDNPTFYQLLN 129 C DNP Y L N Sbjct: 168 CPDNPVSYWLFN 179 >gi|311108230|ref|YP_003981083.1| disulfide bond formation protein B [Achromobacter xylosoxidans A8] gi|310762919|gb|ADP18368.1| disulfide bond formation protein B [Achromobacter xylosoxidans A8] Length = 190 Score = 154 bits (389), Expect = 4e-36, Method: Composition-based stats. Identities = 53/133 (39%), Positives = 74/133 (55%), Gaps = 4/133 (3%) Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60 + G+GFL N+ G HY++ I GA+ + + RQVL+HI PGD GY P+ G+H YTW Sbjct: 53 LAGMGFLLNMRLGPSPLHYAMSIAGALGGLLASGRQVLLHIAPGDPGYGSPLLGLHFYTW 112 Query: 61 SLIFSLVIILFISVLMLFDTAEIKVAKSP----VREIAIYLFVFLIFANFISTILECGLT 116 + I + II+F +V++ D + + + LF + AN ST LECG Sbjct: 113 AFIAFIAIIVFCTVMLAVDRKWGDNMLRKPVSVLGVLVMALFFLMALANVGSTTLECGFG 172 Query: 117 QCFDNPTFYQLLN 129 C DNPT YQ LN Sbjct: 173 PCPDNPTSYQWLN 185 >gi|156977737|ref|YP_001448643.1| hypothetical protein VIBHAR_06525 [Vibrio harveyi ATCC BAA-1116] gi|156529331|gb|ABU74416.1| hypothetical protein VIBHAR_06525 [Vibrio harveyi ATCC BAA-1116] Length = 135 Score = 152 bits (384), Expect = 2e-35, Method: Composition-based stats. Identities = 42/132 (31%), Positives = 75/132 (56%), Gaps = 3/132 (2%) Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60 MI GFL N++ GI+Q+HY ++++GA+ + RQ+ +H++PG G+ + GMH YTW Sbjct: 1 MIMFGFLLNVVYGIEQKHYGVILIGALFGIATSLRQISLHVIPGTPGFGSAILGMHYYTW 60 Query: 61 SLIFSLVIILFISVLMLFDT---AEIKVAKSPVREIAIYLFVFLIFANFISTILECGLTQ 117 + + + + I++L++ + SP+ + L + + N IST +ECG + Sbjct: 61 AFVIFCMAVAGIALLLILWDDRYSNQNHEMSPLAKSVCILAIATVLINVISTFIECGPFE 120 Query: 118 CFDNPTFYQLLN 129 C +P Y LL+ Sbjct: 121 CPADPVSYWLLD 132 >gi|163801305|ref|ZP_02195204.1| hypothetical protein 1103602000598_AND4_10569 [Vibrio sp. AND4] gi|159174794|gb|EDP59594.1| hypothetical protein AND4_10569 [Vibrio sp. AND4] Length = 135 Score = 151 bits (383), Expect = 2e-35, Method: Composition-based stats. Identities = 42/131 (32%), Positives = 73/131 (55%), Gaps = 3/131 (2%) Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60 M+ GFL N++ G++Q+HY I+++GA+ + RQ+ +H++PG G+ P+ GMH YTW Sbjct: 1 MVMFGFLLNVVFGVEQKHYGIVLVGALFGVATSLRQISLHVIPGTPGFGSPILGMHYYTW 60 Query: 61 SLIFSLVIILFISVLMLFDTAEI---KVAKSPVREIAIYLFVFLIFANFISTILECGLTQ 117 + + + I +++L++ E S + L + + N IST +ECG + Sbjct: 61 AFVIFCMAIAGVALLLILWNTEYSNKNYEMSTFGKSVCLLAIVAVLINVISTFVECGPFE 120 Query: 118 CFDNPTFYQLL 128 C +P Y LL Sbjct: 121 CPADPVSYWLL 131 >gi|163801307|ref|ZP_02195206.1| hypothetical protein 1103602000598_AND4_10579 [Vibrio sp. AND4] gi|159174796|gb|EDP59596.1| hypothetical protein AND4_10579 [Vibrio sp. AND4] Length = 179 Score = 151 bits (382), Expect = 3e-35, Method: Composition-based stats. Identities = 43/132 (32%), Positives = 72/132 (54%), Gaps = 3/132 (2%) Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60 MI G L N++ G + RHY ++++GA+ + RQV +H++PG GY P+ GMH YTW Sbjct: 48 MIMFGLLLNVVYGPQSRHYGVVLIGALYGVATSLRQVSLHVIPGTPGYGSPILGMHYYTW 107 Query: 61 SLIFSLVIILFISVLMLFDTA---EIKVAKSPVREIAIYLFVFLIFANFISTILECGLTQ 117 + + + IL ++V+++ + + ++ L + ++ N I T ECG Q Sbjct: 108 AFVLFVTTILVVAVILMLTNKGESSAPYEMTSLGRVSCLLAISVVALNVIGTFAECGPYQ 167 Query: 118 CFDNPTFYQLLN 129 C DNP Y + N Sbjct: 168 CPDNPESYWMFN 179 >gi|293607074|ref|ZP_06689417.1| inner protein [Achromobacter piechaudii ATCC 43553] gi|292814564|gb|EFF73702.1| inner protein [Achromobacter piechaudii ATCC 43553] Length = 190 Score = 149 bits (376), Expect = 1e-34, Method: Composition-based stats. Identities = 49/132 (37%), Positives = 67/132 (50%), Gaps = 4/132 (3%) Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60 + G+GFL N+ G HY + I ++ + + RQVL+H+ PGD GY P GMH YTW Sbjct: 53 LAGVGFLLNMRLGPSPMHYGMSIAASLGGMVASGRQVLLHLAPGDPGYGSPFLGMHFYTW 112 Query: 61 SLIFSLVIILFISVLMLFDTAEI----KVAKSPVREIAIYLFVFLIFANFISTILECGLT 116 + I II+F ++ D K S + + + LF + AN ST LECG Sbjct: 113 AFIAFGAIIVFCVLMQTADRKWGDSMLKKPVSALGILVMALFFVMTLANLGSTTLECGFG 172 Query: 117 QCFDNPTFYQLL 128 C DNP Y L Sbjct: 173 PCPDNPETYLWL 184 >gi|148978274|ref|ZP_01814792.1| hypothetical protein VSWAT3_15147 [Vibrionales bacterium SWAT-3] gi|145962575|gb|EDK27852.1| hypothetical protein VSWAT3_15147 [Vibrionales bacterium SWAT-3] Length = 129 Score = 148 bits (373), Expect = 3e-34, Method: Composition-based stats. Identities = 37/124 (29%), Positives = 66/124 (53%), Gaps = 3/124 (2%) Query: 7 LFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSLIFSL 66 + N++ G +QRHY I+++GA+ + RQ+ +H++PG GY +FGMH YTW+ I Sbjct: 1 MLNVVYGAEQRHYGIVLIGALFGAATSLRQISLHVIPGTPGYGSAIFGMHYYTWAFIIFG 60 Query: 67 VIILFISVLMLFDT---AEIKVAKSPVREIAIYLFVFLIFANFISTILECGLTQCFDNPT 123 + I +++L++ + + + + + + N IST LECG +C +P Sbjct: 61 MTIFGVALLLMLWNNDCKTKEYQMTTFGKSVCIIAIITVLINVISTFLECGPYECPADPI 120 Query: 124 FYQL 127 Y Sbjct: 121 SYWF 124 >gi|294141630|ref|YP_003557608.1| disulfide bond formation protein B [Shewanella violacea DSS12] gi|293328099|dbj|BAJ02830.1| disulfide bond formation protein B, putative [Shewanella violacea DSS12] Length = 182 Score = 145 bits (367), Expect = 2e-33, Method: Composition-based stats. Identities = 42/134 (31%), Positives = 69/134 (51%), Gaps = 6/134 (4%) Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWS 61 + G L N++ G + HY IM+ GA+ +A RQV +H++PG Y P H YTW+ Sbjct: 49 VMFGLLCNVVYGPRTSHYGIMLFGALFGAAVALRQVSLHVIPGTPFYGDPFLSFHFYTWA 108 Query: 62 LIFSLVIILFISVLMLFDTAEIKVAKSPVR------EIAIYLFVFLIFANFISTILECGL 115 I VIIL +V++ F + +V + ++A+ + + + N +ST ECG Sbjct: 109 FITFAVIILGTAVMLSFSSQYKEVKHQTLGEMPLLSKLAVGIVLLVTLMNVLSTFAECGP 168 Query: 116 TQCFDNPTFYQLLN 129 +C +P Y L + Sbjct: 169 FECPADPVQYWLFS 182 >gi|163868988|ref|YP_001610218.1| disulfide bond formation protein B [Bartonella tribocorum CIP 105476] gi|161018665|emb|CAK02223.1| disulfide bond formation protein B [Bartonella tribocorum CIP 105476] Length = 193 Score = 144 bits (365), Expect = 3e-33, Method: Composition-based stats. Identities = 57/133 (42%), Positives = 81/133 (60%), Gaps = 4/133 (3%) Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60 + G GFL N+ +K HY ++I+G + T +A RQV +HI P DLGY FG+H YTW Sbjct: 54 LAGCGFLLNIHHKVKNTHYGMVIIGCMVTSAVAARQVFLHITPDDLGYGSTFFGLHFYTW 113 Query: 61 SLIFSLVIILFISVLMLFDTAEIKVAK----SPVREIAIYLFVFLIFANFISTILECGLT 116 + I S++ I ++ +M+ K + + + A +LFVFLI AN ISTILECG Sbjct: 114 AFIISVLCIFAVASVMILGELAHKFKEFSAFPILSKTASFLFVFLIAANLISTILECGGG 173 Query: 117 QCFDNPTFYQLLN 129 QC D+P Y+LL+ Sbjct: 174 QCADDPVRYELLS 186 >gi|170737007|ref|YP_001778267.1| hypothetical protein Bcenmc03_4643 [Burkholderia cenocepacia MC0-3] gi|169819195|gb|ACA93777.1| conserved hypothetical protein [Burkholderia cenocepacia MC0-3] Length = 195 Score = 144 bits (364), Expect = 4e-33, Method: Composition-based stats. Identities = 53/131 (40%), Positives = 77/131 (58%), Gaps = 3/131 (2%) Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60 + GIGF N+ GI+ HY +++ A+ T +IA RQVL+HI P Y ++G+H YTW Sbjct: 59 LAGIGFAMNIRYGIRGTHYCCVLVSAVATGVIAGRQVLLHISPDSGAYGSALWGLHFYTW 118 Query: 61 SLIFSLVIILFISVLMLFDTAEIKVA---KSPVREIAIYLFVFLIFANFISTILECGLTQ 117 I S++IIL++S+L+ V S IA+ +F I AN +ST+LECG Q Sbjct: 119 CFIASVLIILYVSLLLAVRRTNDTVQPASMSTSGRIAMAVFGLTIIANLVSTLLECGGGQ 178 Query: 118 CFDNPTFYQLL 128 C +P Y+LL Sbjct: 179 CASDPVEYELL 189 >gi|300724708|ref|YP_003714033.1| hypothetical protein XNC1_3917 [Xenorhabdus nematophila ATCC 19061] gi|297631250|emb|CBJ91945.1| conserved hypothetical protein; putative membrane protein [Xenorhabdus nematophila ATCC 19061] Length = 188 Score = 144 bits (364), Expect = 4e-33, Method: Composition-based stats. Identities = 70/131 (53%), Positives = 86/131 (65%), Gaps = 3/131 (2%) Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60 MIG GFLFN+ GIK HYS+ I G + T +A RQV +HILPGD GY FG+H YTW Sbjct: 56 MIGFGFLFNIYFGIKNAHYSLSIFGCLVTGFVAMRQVSLHILPGDTGYGSTFFGLHFYTW 115 Query: 61 SLIFSLVIILFISVLMLFDTAEIKVAK---SPVREIAIYLFVFLIFANFISTILECGLTQ 117 + I S++ I+ I+V+M AK + +IA+ LF FLI AN +STILECG Q Sbjct: 116 AAILSILTIIAIAVIMPLKAGNTDSAKCTPPALGKIAMGLFAFLIAANLVSTILECGGGQ 175 Query: 118 CFDNPTFYQLL 128 C DNPTFYQLL Sbjct: 176 CDDNPTFYQLL 186 >gi|240851132|ref|YP_002972534.1| hypothetical membrane protein [Bartonella grahamii as4aup] gi|240268255|gb|ACS51843.1| hypothetical membrane protein [Bartonella grahamii as4aup] Length = 191 Score = 143 bits (361), Expect = 8e-33, Method: Composition-based stats. Identities = 59/133 (44%), Positives = 81/133 (60%), Gaps = 4/133 (3%) Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60 + G GFL N+ +K HY ++ILG + T +A RQV +HI P DLGY FG+H YTW Sbjct: 54 LAGCGFLLNIHHKVKNTHYGMVILGCMVTSAVAARQVFLHITPDDLGYGSTFFGLHFYTW 113 Query: 61 SLIFSLVIILFISVLMLFDTAEIKVAK----SPVREIAIYLFVFLIFANFISTILECGLT 116 + I S++ I +S +M+ K + + + A +LFVFLI AN ISTILECG Sbjct: 114 AFIISVLCIFAVSFVMILGELAHKFKEFSPFPFLSKTASFLFVFLIAANLISTILECGGG 173 Query: 117 QCFDNPTFYQLLN 129 QC D+P Y+LL+ Sbjct: 174 QCADDPVRYELLS 186 >gi|37524258|ref|NP_927602.1| hypothetical protein plu0239 [Photorhabdus luminescens subsp. laumondii TTO1] gi|36783681|emb|CAE12534.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii TTO1] Length = 189 Score = 143 bits (361), Expect = 8e-33, Method: Composition-based stats. Identities = 73/132 (55%), Positives = 91/132 (68%), Gaps = 4/132 (3%) Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60 MIG GFLFNL GIK HY + ++G + T I+A RQV +HI PGDLGY +FG+H YTW Sbjct: 56 MIGFGFLFNLCFGIKSAHYGLSLIGCVVTGIVAIRQVFLHITPGDLGYGSALFGIHFYTW 115 Query: 61 SLIFSLVIILFISVLMLFDT----AEIKVAKSPVREIAIYLFVFLIFANFISTILECGLT 116 +LI S++ I+ ISV+++ + E K S + +I I LFV LI AN ISTILECG Sbjct: 116 ALICSVIAIIGISVMLILKSLEKTTEEKQKTSAIGQIIIGLFVILITANLISTILECGGG 175 Query: 117 QCFDNPTFYQLL 128 QC DNPTFYQLL Sbjct: 176 QCDDNPTFYQLL 187 >gi|90409260|ref|ZP_01217363.1| hypothetical protein PCNPT3_04227 [Psychromonas sp. CNPT3] gi|90309633|gb|EAS37815.1| hypothetical protein PCNPT3_04227 [Psychromonas sp. CNPT3] Length = 182 Score = 142 bits (359), Expect = 1e-32, Method: Composition-based stats. Identities = 44/134 (32%), Positives = 70/134 (52%), Gaps = 6/134 (4%) Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWS 61 + G L N++ G + HY IMI GA+ +A RQ+ +H++PG Y P F H YTW+ Sbjct: 49 VLFGLLCNVVYGPRTSHYGIMIFGALFGAGVALRQISLHVIPGTPFYGDPFFSFHFYTWA 108 Query: 62 LIFSLVIILFISVLMLFDTAEIKVAKSPV------REIAIYLFVFLIFANFISTILECGL 115 I +VI+ +V++ F + ++ ++AI L +F+ N +ST ECG Sbjct: 109 FISFVVIVFGSAVMLSFSSQYKEIKYQTFVQMPVLSKVAIALVLFVTLLNVLSTFAECGP 168 Query: 116 TQCFDNPTFYQLLN 129 +C +P Y L N Sbjct: 169 FECPSDPIQYWLFN 182 >gi|317405865|gb|EFV86148.1| hypothetical protein HMPREF0005_02716 [Achromobacter xylosoxidans C54] Length = 190 Score = 142 bits (358), Expect = 2e-32, Method: Composition-based stats. Identities = 45/132 (34%), Positives = 67/132 (50%), Gaps = 4/132 (3%) Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60 + G+G L NL G HY++ I ++ + + RQVL+HI PGD GY P G+H YTW Sbjct: 53 LAGVGLLLNLRLGPSPMHYAMTIAASLGGMVASGRQVLLHIAPGDAGYGTPFLGLHFYTW 112 Query: 61 SLIFSLVIILFISVLMLFDTAEIKVAKSP----VREIAIYLFVFLIFANFISTILECGLT 116 + I +I+F +++ D + + + LF ++ AN ST L+CG Sbjct: 113 AFIAFGALIVFCVLMLSVDRKWGDNMLKRPVSVLGVVIMALFFIMVLANLGSTTLQCGFG 172 Query: 117 QCFDNPTFYQLL 128 C DNP Y L Sbjct: 173 PCPDNPAGYLWL 184 >gi|254780338|ref|YP_003064751.1| hypothetical protein CLIBASIA_01115 [Candidatus Liberibacter asiaticus str. psy62] gi|254040015|gb|ACT56811.1| hypothetical protein CLIBASIA_01115 [Candidatus Liberibacter asiaticus str. psy62] Length = 129 Score = 142 bits (358), Expect = 2e-32, Method: Composition-based stats. Identities = 129/129 (100%), Positives = 129/129 (100%) Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW Sbjct: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60 Query: 61 SLIFSLVIILFISVLMLFDTAEIKVAKSPVREIAIYLFVFLIFANFISTILECGLTQCFD 120 SLIFSLVIILFISVLMLFDTAEIKVAKSPVREIAIYLFVFLIFANFISTILECGLTQCFD Sbjct: 61 SLIFSLVIILFISVLMLFDTAEIKVAKSPVREIAIYLFVFLIFANFISTILECGLTQCFD 120 Query: 121 NPTFYQLLN 129 NPTFYQLLN Sbjct: 121 NPTFYQLLN 129 >gi|260434000|ref|ZP_05787971.1| hypothetical protein SL1157_3162 [Silicibacter lacuscaerulensis ITI-1157] gi|260417828|gb|EEX11087.1| hypothetical protein SL1157_3162 [Silicibacter lacuscaerulensis ITI-1157] Length = 189 Score = 141 bits (357), Expect = 2e-32, Method: Composition-based stats. Identities = 44/135 (32%), Positives = 81/135 (60%), Gaps = 7/135 (5%) Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWS 61 +G+G NL+ G + +HY++M++ A+ ++ RQ+L+HI+PG Y PV G+H YTW+ Sbjct: 49 VGVGLGLNLLYGPRPQHYAMMLIAALYGGSVSVRQILLHIVPGTGHYGSPVLGLHYYTWA 108 Query: 62 LIFSLVIILFISVLMLFDTAEIKVAK-------SPVREIAIYLFVFLIFANFISTILECG 114 I +I+L +++++FD + + + + ++A ++ + L N ST+LECG Sbjct: 109 AICFFLILLGTAIMLMFDRQYVDDRRAQPRFGGNRLAKVAFFIMLGLAVLNAGSTLLECG 168 Query: 115 LTQCFDNPTFYQLLN 129 C D PT Y+L++ Sbjct: 169 PGVCADPPTDYKLID 183 >gi|254480095|ref|ZP_05093343.1| hypothetical protein GPB2148_3132 [marine gamma proteobacterium HTCC2148] gi|214039657|gb|EEB80316.1| hypothetical protein GPB2148_3132 [marine gamma proteobacterium HTCC2148] Length = 181 Score = 141 bits (357), Expect = 2e-32, Method: Composition-based stats. Identities = 39/133 (29%), Positives = 62/133 (46%), Gaps = 6/133 (4%) Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWS 61 + IG L N+ G + HY I ++ +A RQV +H++PG GY P G+H YTW+ Sbjct: 47 VSIGLLLNVTHGPRPSHYGFAIAASVAGGAMALRQVSLHVIPGTPGYGSPFLGLHFYTWA 106 Query: 62 LIFSLVIILFISVLMLFDTAEIKVAKSPVR------EIAIYLFVFLIFANFISTILECGL 115 + +I I+++ + R ++AI + +I N ++ ECG Sbjct: 107 FLLFAFMIAAIAMISSLPRQYDDLGWLQWRQQPLLCKLAIVVITIIISLNALAAFSECGP 166 Query: 116 TQCFDNPTFYQLL 128 C DNP Y L Sbjct: 167 GTCPDNPEQYWLF 179 >gi|290476875|ref|YP_003469786.1| hypothetical protein XBJ1_3906 [Xenorhabdus bovienii SS-2004] gi|289176219|emb|CBJ83024.1| conserved hypothetical protein; putative membrane protein [Xenorhabdus bovienii SS-2004] Length = 184 Score = 141 bits (356), Expect = 3e-32, Method: Composition-based stats. Identities = 66/131 (50%), Positives = 87/131 (66%), Gaps = 3/131 (2%) Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60 MIG+GFLFN+ GIK HYS+ +LG + T IA RQV +HILPGD GY G+H YTW Sbjct: 52 MIGLGFLFNIYFGIKNAHYSLSLLGCLVTGFIAMRQVSLHILPGDTGYGSTFLGLHFYTW 111 Query: 61 SLIFSLVIILFISVLMLFDTAEIKVAK---SPVREIAIYLFVFLIFANFISTILECGLTQ 117 + + S++ I+ I+V+M ++ + +IA+ LF FLI AN +ST+LECG Q Sbjct: 112 AAVLSILTIIAIAVIMPLKAGNSDSSRYTPPTLGKIAMGLFAFLIAANLVSTVLECGSGQ 171 Query: 118 CFDNPTFYQLL 128 C DNPTFYQLL Sbjct: 172 CDDNPTFYQLL 182 >gi|170735271|ref|YP_001774385.1| hypothetical protein Bcenmc03_6778 [Burkholderia cenocepacia MC0-3] gi|169821309|gb|ACA95890.1| conserved hypothetical protein [Burkholderia cenocepacia MC0-3] Length = 195 Score = 141 bits (356), Expect = 3e-32, Method: Composition-based stats. Identities = 52/131 (39%), Positives = 78/131 (59%), Gaps = 3/131 (2%) Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60 + GIGF N+ GI+ HY +++ A+ T +IA RQVL+HI P Y ++G+H YTW Sbjct: 59 LAGIGFAMNVRYGIRGTHYCCVLVSAVATGVIAGRQVLLHISPDSGAYGSALWGLHFYTW 118 Query: 61 SLIFSLVIILFISVLMLFDTAE---IKVAKSPVREIAIYLFVFLIFANFISTILECGLTQ 117 I S++IIL++S+L+ V+ + IA+ +F I AN +ST+LECG Q Sbjct: 119 CFIASVLIILYVSLLLAVRRTSHTVQPVSMTTGGRIAMAVFGLTIIANLVSTLLECGGGQ 178 Query: 118 CFDNPTFYQLL 128 C +P Y+LL Sbjct: 179 CESDPVAYELL 189 >gi|49476082|ref|YP_034123.1| hypothetical protein BH14180 [Bartonella henselae str. Houston-1] gi|49238890|emb|CAF28183.1| hypothetical protein BH14180 [Bartonella henselae str. Houston-1] Length = 193 Score = 141 bits (355), Expect = 4e-32, Method: Composition-based stats. Identities = 58/133 (43%), Positives = 81/133 (60%), Gaps = 4/133 (3%) Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60 + G GFL N+ +K HY ++ILG + T I+A RQV +HI P DLGY FG+H YTW Sbjct: 54 LAGCGFLLNIHHKVKNTHYGMVILGCMVTSIVAARQVFLHITPDDLGYGSTFFGLHFYTW 113 Query: 61 SLIFSLVIILFISVLMLFDTAEIKVAK----SPVREIAIYLFVFLIFANFISTILECGLT 116 + I +++ I ++ LM+ K + ++A LFVFLI AN IST+LECG Sbjct: 114 AFIIAVLCIFAVAFLMILSELSYKFKVFAPFPLLSKMASGLFVFLIAANLISTVLECGTG 173 Query: 117 QCFDNPTFYQLLN 129 QC D+P Y+LL+ Sbjct: 174 QCADDPVRYELLS 186 >gi|158422613|ref|YP_001523905.1| putative transmembrane protein [Azorhizobium caulinodans ORS 571] gi|158329502|dbj|BAF86987.1| putative transmembrane protein [Azorhizobium caulinodans ORS 571] Length = 185 Score = 140 bits (354), Expect = 6e-32, Method: Composition-based stats. Identities = 48/133 (36%), Positives = 67/133 (50%), Gaps = 6/133 (4%) Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWS 61 G N+ G + HY+I+IL A +I+ RQ L+HI+PG Y + G+H Y+W+ Sbjct: 49 AAFGLALNVKFGPRPSHYAIVILSAFCGGLISGRQTLLHIVPGTGTYGDALLGLHFYSWA 108 Query: 62 LIFSLVIILFISVLMLFDTAEIKVAKS------PVREIAIYLFVFLIFANFISTILECGL 115 L+ VIIL +++LFD + + L L F N ST+LECG Sbjct: 109 LVLFCVIILGCGLMLLFDQQFAGDNRPLGPRAATFGLAMVVLGFLLAFGNGASTVLECGG 168 Query: 116 TQCFDNPTFYQLL 128 C DNPT YQL Sbjct: 169 GLCPDNPTSYQLF 181 >gi|253987664|ref|YP_003039020.1| hypothetical protein PAU_00181 [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|211638571|emb|CAR67191.1| putative membrane protein [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253779114|emb|CAQ82274.1| putative membrane protein [Photorhabdus asymbiotica] Length = 189 Score = 140 bits (353), Expect = 7e-32, Method: Composition-based stats. Identities = 71/132 (53%), Positives = 89/132 (67%), Gaps = 4/132 (3%) Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60 MIG GFLFNL GIK HY I ++G I T IIA RQV +HILPGD+GY +FG+H YTW Sbjct: 56 MIGFGFLFNLRFGIKSAHYGIALIGCIVTGIIAIRQVFLHILPGDIGYGSALFGIHFYTW 115 Query: 61 SLIFSLVIILFISVLMLFDTAEIKVAKSP----VREIAIYLFVFLIFANFISTILECGLT 116 +L+ S++ I+ ISV+++ + E + +I I FV LI AN IST+LECG Sbjct: 116 ALLSSVIAIIAISVMLILKSLEKTTEEKGNTPVFGQILIGFFVLLITANLISTVLECGGG 175 Query: 117 QCFDNPTFYQLL 128 QC DNPTFYQLL Sbjct: 176 QCDDNPTFYQLL 187 >gi|49474631|ref|YP_032673.1| hypothetical protein BQ11210 [Bartonella quintana str. Toulouse] gi|49240135|emb|CAF26582.1| hypothetical protein BQ11210 [Bartonella quintana str. Toulouse] Length = 193 Score = 139 bits (352), Expect = 1e-31, Method: Composition-based stats. Identities = 54/133 (40%), Positives = 81/133 (60%), Gaps = 4/133 (3%) Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60 + G GFLFN+ +K HY ++ILG + T ++A RQV +HI P DLGY FG+H YTW Sbjct: 54 LAGCGFLFNIHHKVKNTHYGMVILGCMVTSVVAARQVFLHITPDDLGYGSTFFGLHFYTW 113 Query: 61 SLIFSLVIILFISVLMLFDTAEIKVA----KSPVREIAIYLFVFLIFANFISTILECGLT 116 + + +++ I ++ +M+ K + A +LF+FLI AN +ST+LECG Sbjct: 114 AFLIAVLCIFAVTFIMILSELAHKFKVFSPIPLLSGAASFLFIFLIAANLVSTVLECGGG 173 Query: 117 QCFDNPTFYQLLN 129 QC D+P Y+LL+ Sbjct: 174 QCADDPVRYELLS 186 >gi|238919044|ref|YP_002932558.1| hypothetical protein NT01EI_1112 [Edwardsiella ictaluri 93-146] gi|238868612|gb|ACR68323.1| conserved hypothetical protein [Edwardsiella ictaluri 93-146] Length = 189 Score = 137 bits (345), Expect = 6e-31, Method: Composition-based stats. Identities = 63/132 (47%), Positives = 86/132 (65%), Gaps = 4/132 (3%) Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60 +IG GFLFN+ GIK HY I ++G + T IA RQ+ +HILPGD GY +H YTW Sbjct: 56 LIGFGFLFNVRFGIKGAHYGIALIGCVITGSIAARQMFLHILPGDSGYGSTFLELHFYTW 115 Query: 61 SLIFSLVIILFISVLMLF----DTAEIKVAKSPVREIAIYLFVFLIFANFISTILECGLT 116 +L+ S+++I+ I+V+M+ T ++ +IAI LF +I AN IST+LECG Sbjct: 116 ALLASIIVIVAIAVMMMLGEVRPTTGETISVPLWGKIAIALFALVIVANLISTVLECGGG 175 Query: 117 QCFDNPTFYQLL 128 QC DNPTFYQL+ Sbjct: 176 QCADNPTFYQLI 187 >gi|300693183|ref|YP_003749156.1| hypothetical protein RPSI07_mp0150 [Ralstonia solanacearum PSI07] gi|299075220|emb|CBJ34509.1| conserved membrane protein of unknown function [Ralstonia solanacearum PSI07] Length = 183 Score = 134 bits (339), Expect = 3e-30, Method: Composition-based stats. Identities = 47/133 (35%), Positives = 69/133 (51%), Gaps = 6/133 (4%) Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWS 61 G+G NL G + HY++MIL ++ +IA RQ+L+HI+PG Y ++G+HLYT + Sbjct: 49 AGVGLALNLRFGSRPAHYALMILASLAGAVIAGRQILLHIVPGTGTYGEALWGLHLYTLA 108 Query: 62 LIFSLVIILFISVLMLF------DTAEIKVAKSPVREIAIYLFVFLIFANFISTILECGL 115 I V+I +V++ D V S A+ L L N + T LECG Sbjct: 109 FIAFSVMIAGTAVMLFLERSSEADEGPALVPPSRAALTAVVLLAVLTLGNVVGTFLECGG 168 Query: 116 TQCFDNPTFYQLL 128 C D+P Y+LL Sbjct: 169 GMCADDPVIYELL 181 >gi|298293265|ref|YP_003695204.1| disulfide bond formation protein DsbB [Starkeya novella DSM 506] gi|296929776|gb|ADH90585.1| Disulfide bond formation protein DsbB [Starkeya novella DSM 506] Length = 199 Score = 133 bits (335), Expect = 9e-30, Method: Composition-based stats. Identities = 51/131 (38%), Positives = 72/131 (54%), Gaps = 4/131 (3%) Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWS 61 +G+G NL G + HY+I IL A+ +I+TRQVL+HI+PG + G+H Y+W+ Sbjct: 58 VGLGLALNLRFGPRPSHYAIAILSAMAGGVISTRQVLLHIVPGSGTFGADFLGLHFYSWA 117 Query: 62 LIFSLVIILFISVLMLFDT----AEIKVAKSPVREIAIYLFVFLIFANFISTILECGLTQ 117 L+ +VI +VL+LFD + + A L L N +ST+LEC Sbjct: 118 LVLFIVIAAGCAVLLLFDRQFAPGTARYRLGGLALAAFALIALLALGNGVSTVLECAGGL 177 Query: 118 CFDNPTFYQLL 128 C DNPT YQLL Sbjct: 178 CPDNPTTYQLL 188 >gi|332184421|gb|AEE26675.1| Putative inner membrane protein [Francisella cf. novicida 3523] Length = 189 Score = 133 bits (334), Expect = 1e-29, Method: Composition-based stats. Identities = 42/136 (30%), Positives = 75/136 (55%), Gaps = 13/136 (9%) Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWS 61 IG GFL N+ I+ HY++ +L A+ T ++ RQ+ +H+ +G+ V GMH+Y+W Sbjct: 53 IGFGFLLNMRYNIRPSHYALSLLAAVFTSFVSLRQIALHVT-DPVGFGSRVLGMHMYSWV 111 Query: 62 LIFSLVIILFISVLMLFDTAEIKVAKSP------------VREIAIYLFVFLIFANFIST 109 + S++ I++I+++M + + + +I +F+ ++FAN ST Sbjct: 112 FVISMIAIIYIAIVMSYPRQYELRKRPQEISEAKNNIIRILTQIVFIIFLIVVFANVAST 171 Query: 110 ILECGLTQCFDNPTFY 125 ECGL +C D+PT Y Sbjct: 172 FFECGLHECPDDPTRY 187 >gi|254374698|ref|ZP_04990179.1| hypothetical protein FTDG_00873 [Francisella novicida GA99-3548] gi|151572417|gb|EDN38071.1| hypothetical protein FTDG_00873 [Francisella novicida GA99-3548] Length = 194 Score = 129 bits (326), Expect = 9e-29, Method: Composition-based stats. Identities = 43/136 (31%), Positives = 74/136 (54%), Gaps = 13/136 (9%) Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWS 61 IG GFL N+ I+ HY++ +L A+ T ++ RQ+ +H+ +G+ V GMH+Y+W Sbjct: 58 IGFGFLLNMRFNIRPSHYALSLLAAVFTSFVSLRQIALHVT-DPVGFGSKVLGMHMYSWV 116 Query: 62 LIFSLVIILFISVLMLFDTAE------------IKVAKSPVREIAIYLFVFLIFANFIST 109 + S+V I++I+++M + +I +F+ ++FAN +ST Sbjct: 117 FVISMVAIIYIAIVMSYPRQYELRRQPQQISEAKNNIMRLFIQIIFIIFLLVVFANVVST 176 Query: 110 ILECGLTQCFDNPTFY 125 ECGL +C D+PT Y Sbjct: 177 FFECGLHECPDDPTRY 192 >gi|62263489|gb|AAX78165.1| unknown protein [synthetic construct] Length = 224 Score = 129 bits (326), Expect = 9e-29, Method: Composition-based stats. Identities = 42/136 (30%), Positives = 75/136 (55%), Gaps = 13/136 (9%) Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWS 61 IG GFL N+ I+ HY++ +L A+ T ++ RQ+ +H+ +G+ V GMH+Y+W Sbjct: 79 IGFGFLLNMRFNIRPSHYALSLLAAVFTSFVSLRQIALHVT-DPVGFGSKVLGMHMYSWV 137 Query: 62 LIFSLVIILFISVLMLFDTAEIKVAKSP------------VREIAIYLFVFLIFANFIST 109 + S++ I++I+++M + + +I +F+ ++FAN +ST Sbjct: 138 FVISMIAIIYIAIVMSYPRQYELRRQPQQISEAKNNIIRLFIQIIFIIFLLVVFANVVST 197 Query: 110 ILECGLTQCFDNPTFY 125 ECGL +C D+PT Y Sbjct: 198 FFECGLHECPDDPTRY 213 >gi|194323862|ref|ZP_03057638.1| hypothetical protein FTE_0697 [Francisella tularensis subsp. novicida FTE] gi|208779953|ref|ZP_03247297.1| hypothetical protein FTG_0700 [Francisella novicida FTG] gi|194322226|gb|EDX19708.1| hypothetical protein FTE_0697 [Francisella tularensis subsp. novicida FTE] gi|208744408|gb|EDZ90708.1| hypothetical protein FTG_0700 [Francisella novicida FTG] Length = 194 Score = 129 bits (325), Expect = 1e-28, Method: Composition-based stats. Identities = 43/136 (31%), Positives = 75/136 (55%), Gaps = 13/136 (9%) Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWS 61 IG GFL N+ I+ HY++ +L A+ T ++ RQ+ +H+ +G+ V GMH+Y+W Sbjct: 58 IGFGFLLNMRFNIRPSHYALSLLAAVFTSFVSLRQIALHVT-DPVGFGSKVLGMHMYSWV 116 Query: 62 LIFSLVIILFISVLMLFDTAEIKVAKSP------------VREIAIYLFVFLIFANFIST 109 + S+V I++I+++M + + +I +F+ ++FAN +ST Sbjct: 117 FVISMVAIIYIAIVMSYPRQYELRRQPQQISEAKNNIIRLFIQIIFIIFLLVVFANVVST 176 Query: 110 ILECGLTQCFDNPTFY 125 ECGL +C D+PT Y Sbjct: 177 FFECGLHECPDDPTRY 192 >gi|254373241|ref|ZP_04988730.1| conserved hypothetical protein [Francisella tularensis subsp. novicida GA99-3549] gi|151570968|gb|EDN36622.1| conserved hypothetical protein [Francisella novicida GA99-3549] Length = 194 Score = 128 bits (322), Expect = 2e-28, Method: Composition-based stats. Identities = 42/136 (30%), Positives = 75/136 (55%), Gaps = 13/136 (9%) Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWS 61 IG GFL N+ I+ HY++ +L A+ T ++ RQ+ +H+ +G+ V GMH+Y+W Sbjct: 58 IGFGFLLNMRFNIRPSHYALSLLAAVFTSFVSLRQIALHVT-DPVGFGSKVLGMHMYSWV 116 Query: 62 LIFSLVIILFISVLMLFDTAEIKVAKSP------------VREIAIYLFVFLIFANFIST 109 + S++ I++I+++M + + +I +F+ ++FAN +ST Sbjct: 117 FVISMIAIIYIAIVMSYPRQYELRRQPQQISEAKNNIIRLFIQIIFIIFLLVVFANVVST 176 Query: 110 ILECGLTQCFDNPTFY 125 ECGL +C D+PT Y Sbjct: 177 FFECGLHECPDDPTRY 192 >gi|134301613|ref|YP_001121581.1| hypothetical protein FTW_0552 [Francisella tularensis subsp. tularensis WY96-3418] gi|134049390|gb|ABO46461.1| hypothetical protein FTW_0552 [Francisella tularensis subsp. tularensis WY96-3418] Length = 194 Score = 128 bits (322), Expect = 2e-28, Method: Composition-based stats. Identities = 42/136 (30%), Positives = 75/136 (55%), Gaps = 13/136 (9%) Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWS 61 IG GFL N+ I+ HY++ +L A+ T ++ RQ+ +H+ +G+ V GMH+Y+W Sbjct: 58 IGFGFLLNMRFNIRPSHYALSLLAAVFTSFVSLRQIALHVT-DPVGFGSKVLGMHMYSWV 116 Query: 62 LIFSLVIILFISVLMLFDTAEIKVAKSP------------VREIAIYLFVFLIFANFIST 109 + S++ I++I+++M + + +I +F+ ++FAN +ST Sbjct: 117 FVISMIAIIYIAIVMSYPRQYELRRQPQQISEAKNNIIRLFIQIIFIIFLLVVFANVVST 176 Query: 110 ILECGLTQCFDNPTFY 125 ECGL +C D+PT Y Sbjct: 177 FFECGLHECPDDPTRY 192 >gi|170701333|ref|ZP_02892296.1| putative transmembrane protein [Burkholderia ambifaria IOP40-10] gi|170133749|gb|EDT02114.1| putative transmembrane protein [Burkholderia ambifaria IOP40-10] Length = 201 Score = 128 bits (322), Expect = 3e-28, Method: Composition-based stats. Identities = 47/140 (33%), Positives = 74/140 (52%), Gaps = 13/140 (9%) Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWS 61 G+G NL G++ HY+I++ GA+ +I+ RQ L+HI+PG Y + GMH+Y + Sbjct: 58 AGMGLALNLRFGMRPSHYAIILFGALLGGVISARQSLLHIVPGSGAYGREILGMHMYVAA 117 Query: 62 LIFSLVIILFISVLMLFD-------TAEIKVAKSPVRE------IAIYLFVFLIFANFIS 108 + + I++ ++ ++LFD +E + P R +A+ LF L N +S Sbjct: 118 FVGFVAIVVAVACMLLFDCQFLQRADSEAPAEQQPPRSLGGVSMVAVALFAVLTLGNAVS 177 Query: 109 TILECGLTQCFDNPTFYQLL 128 T LECG C NP Y LL Sbjct: 178 TALECGAGLCVANPVSYLLL 197 >gi|283479837|emb|CAY75753.1| hypothetical protein EPYR_03373 [Erwinia pyrifoliae DSM 12163] Length = 211 Score = 127 bits (321), Expect = 3e-28, Method: Composition-based stats. Identities = 53/124 (42%), Positives = 79/124 (63%), Gaps = 3/124 (2%) Query: 8 FNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSLIFSLV 67 FNL G ++ HY ++I+GA+ +ATR V +HI PGD GY +P G+HLYTWSLI ++ Sbjct: 87 FNLYFGNRKLHYGMVIIGALALAAVATRHVFLHITPGDTGYGLPFLGIHLYTWSLILAVA 146 Query: 68 IILFISVLMLFDTAEIK---VAKSPVREIAIYLFVFLIFANFISTILECGLTQCFDNPTF 124 II+ ++V ++ V KS + + ++ ++ AN ST+L+CG QC DNPT+ Sbjct: 147 IIIGVAVTLMITPDAATAPVVIKSFTQRFLMIIYALILVANLSSTVLQCGGGQCDDNPTY 206 Query: 125 YQLL 128 YQLL Sbjct: 207 YQLL 210 >gi|332678603|gb|AEE87732.1| Putative inner membrane protein [Francisella cf. novicida Fx1] Length = 189 Score = 127 bits (320), Expect = 4e-28, Method: Composition-based stats. Identities = 43/136 (31%), Positives = 75/136 (55%), Gaps = 13/136 (9%) Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWS 61 IG GFL N+ I+ HY++ +L A+ T ++ RQ+ +H+ +G+ V GMH+Y+W Sbjct: 53 IGFGFLLNMRFNIRPSHYALSLLAAVFTSFVSLRQIALHVT-DPVGFGSKVLGMHMYSWV 111 Query: 62 LIFSLVIILFISVLMLFDTAEIKVAKSP------------VREIAIYLFVFLIFANFIST 109 + S+V I++I+++M + + +I +F+ ++FAN +ST Sbjct: 112 FVISMVAIIYIAIVMSYPRQYELRRQPQQISEAKNNIIRLFIQIIFIIFLLVVFANVVST 171 Query: 110 ILECGLTQCFDNPTFY 125 ECGL +C D+PT Y Sbjct: 172 FFECGLHECPDDPTRY 187 >gi|83747350|ref|ZP_00944390.1| Disulfide bond formation protein B [Ralstonia solanacearum UW551] gi|83725937|gb|EAP73075.1| Disulfide bond formation protein B [Ralstonia solanacearum UW551] Length = 188 Score = 127 bits (320), Expect = 5e-28, Method: Composition-based stats. Identities = 47/138 (34%), Positives = 69/138 (50%), Gaps = 11/138 (7%) Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWS 61 +G+G NL G + HY++MIL ++ +IA RQVL+HI+PG Y ++G+HLYT + Sbjct: 49 VGVGLALNLRFGARPAHYALMILASLGGAVIAGRQVLLHIVPGTGTYGEALWGLHLYTLA 108 Query: 62 LIFSLVIILFISVLMLFDT-----------AEIKVAKSPVREIAIYLFVFLIFANFISTI 110 I VII +V++ + S A+ L L N + T Sbjct: 109 FIAFSVIIAGTAVMLFLERLPEADEGTARLPREPSLTSRAALAAVALLTVLTLGNVVGTF 168 Query: 111 LECGLTQCFDNPTFYQLL 128 LECG C D+P Y+LL Sbjct: 169 LECGAGMCADDPVVYELL 186 >gi|145589498|ref|YP_001156095.1| hypothetical protein Pnuc_1317 [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|145047904|gb|ABP34531.1| conserved hypothetical protein [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 187 Score = 127 bits (319), Expect = 6e-28, Method: Composition-based stats. Identities = 39/125 (31%), Positives = 69/125 (55%), Gaps = 1/125 (0%) Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60 +IG + N+ G HY ILG + ++ RQV +HILPGD G+ +H YTW Sbjct: 52 IIGFALVLNIRCGAHSAHYGWAILGGLVGMTVSLRQVFLHILPGDKGFGATFLELHFYTW 111 Query: 61 SLIFSLVIILFISVLMLFDTAEIKVAKSPVREIAIYLFVFLIFANFISTILECGLTQCFD 120 + + + ++ ++L++ E++ +++ + +F+ L+F N +ST+LECG C D Sbjct: 112 AFVGYMGLLAGQAILLMLPNREVR-SRTWFANALVIIFILLVFGNLLSTLLECGFGPCAD 170 Query: 121 NPTFY 125 +P Y Sbjct: 171 DPVKY 175 >gi|207739629|ref|YP_002258022.1| hypothetical protein RSIPO_04330 [Ralstonia solanacearum IPO1609] gi|206593009|emb|CAQ59915.1| conserved hypothetical protein [Ralstonia solanacearum IPO1609] Length = 172 Score = 127 bits (319), Expect = 6e-28, Method: Composition-based stats. Identities = 47/138 (34%), Positives = 69/138 (50%), Gaps = 11/138 (7%) Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWS 61 +G+G NL G + HY++MIL ++ +IA RQVL+HI+PG Y ++G+HLYT + Sbjct: 33 VGVGLALNLRFGARPAHYALMILASLGGAVIAGRQVLLHIVPGTGTYGEALWGLHLYTLA 92 Query: 62 LIFSLVIILFISVLMLFDT-----------AEIKVAKSPVREIAIYLFVFLIFANFISTI 110 I VII +V++ + S A+ L L N + T Sbjct: 93 FIAFSVIIAGTAVMLFLERLPEADEGTARLPREPSLTSRAALAAVALLTVLTLGNVVGTF 152 Query: 111 LECGLTQCFDNPTFYQLL 128 LECG C D+P Y+LL Sbjct: 153 LECGAGMCADDPVVYELL 170 >gi|292486979|ref|YP_003529849.1| hypothetical protein EAMY_0491 [Erwinia amylovora CFBP1430] gi|292900634|ref|YP_003540003.1| disulfide bond formation membrane protein [Erwinia amylovora ATCC 49946] gi|291200482|emb|CBJ47611.1| putative disulfide bond formation membrane protein [Erwinia amylovora ATCC 49946] gi|291552396|emb|CBA19441.1| hypothetical protein EAMY_0491 [Erwinia amylovora CFBP1430] Length = 183 Score = 127 bits (319), Expect = 7e-28, Method: Composition-based stats. Identities = 53/124 (42%), Positives = 81/124 (65%), Gaps = 3/124 (2%) Query: 8 FNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSLIFSLV 67 FNL G ++ HY ++I GA+ +ATR V +HI+PGD GY +P G+HLYTWSLI ++ Sbjct: 59 FNLYFGNRKLHYGMVIFGALALATVATRHVFLHIMPGDTGYGLPFLGIHLYTWSLILAVA 118 Query: 68 IILFISVLMLFDTAEIK---VAKSPVREIAIYLFVFLIFANFISTILECGLTQCFDNPTF 124 +I ++V ++ V KS ++I + ++ ++ AN +ST+L+CG QC DNPT+ Sbjct: 119 LIFGVAVTLMITPDAATPSVVNKSITQKILMIIYALIVVANLLSTVLQCGGGQCDDNPTY 178 Query: 125 YQLL 128 YQLL Sbjct: 179 YQLL 182 >gi|118497888|ref|YP_898938.1| DsbB family disulfide bond formation protein [Francisella tularensis subsp. novicida U112] gi|118423794|gb|ABK90184.1| disulfide bond formation protein DsbB family [Francisella novicida U112] Length = 189 Score = 126 bits (318), Expect = 8e-28, Method: Composition-based stats. Identities = 43/136 (31%), Positives = 75/136 (55%), Gaps = 13/136 (9%) Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWS 61 IG GFL N+ I+ HY++ +L A+ T ++ RQ+ +H+ +G+ V GMH+Y+W Sbjct: 53 IGFGFLLNMRFNIRPSHYALSLLAAVFTSFVSLRQIALHVT-DPVGFGSKVLGMHMYSWV 111 Query: 62 LIFSLVIILFISVLMLFDTAEIKVAKSP------------VREIAIYLFVFLIFANFIST 109 + S+V I++I+++M + + +I +F+ ++FAN +ST Sbjct: 112 FVISMVAIIYIAIVMSYPRQYELRRQPQQISEAKNNIIRLFIQIIFIIFLLVVFANVVST 171 Query: 110 ILECGLTQCFDNPTFY 125 ECGL +C D+PT Y Sbjct: 172 FFECGLHECPDDPTRY 187 >gi|17548420|ref|NP_521760.1| hypothetical protein RS04712 [Ralstonia solanacearum GMI1000] gi|17430667|emb|CAD17350.1| probable transmembrane protein [Ralstonia solanacearum GMI1000] Length = 184 Score = 126 bits (318), Expect = 8e-28, Method: Composition-based stats. Identities = 46/134 (34%), Positives = 69/134 (51%), Gaps = 7/134 (5%) Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWS 61 G+G NL G + HY++MIL ++ IA RQ+L+HI+PG Y ++G+HLYT + Sbjct: 49 AGVGLALNLRFGARPAHYALMILASLAGAAIAGRQILLHIVPGTGTYGEALWGLHLYTLA 108 Query: 62 LIFSLVIILFISVLMLFDTAE-------IKVAKSPVREIAIYLFVFLIFANFISTILECG 114 I V+I ++L+L + + + S A+ L L N + T LECG Sbjct: 109 FIAFAVMIAGTAILLLLERSPEADEGPAKRAPMSRAALAAVALLTVLTLGNVLGTFLECG 168 Query: 115 LTQCFDNPTFYQLL 128 C D+P Y LL Sbjct: 169 GGMCADDPVIYDLL 182 >gi|167627604|ref|YP_001678104.1| hypothetical protein Fphi_1378 [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|167597605|gb|ABZ87603.1| conserved hypothetical protein [Francisella philomiragia subsp. philomiragia ATCC 25017] Length = 146 Score = 126 bits (317), Expect = 9e-28, Method: Composition-based stats. Identities = 43/138 (31%), Positives = 72/138 (52%), Gaps = 13/138 (9%) Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWS 61 IG FL N+ ++ HY++ +L A+ T I+ RQ+ +H+ +G+ VFG+H+YTW Sbjct: 9 IGFEFLLNIRYSVRPSHYALSLLAAVLTSFISLRQIALHVS-DPVGFGSTVFGLHMYTWV 67 Query: 62 LIFSLVIILFISVLMLFDTAEI------------KVAKSPVREIAIYLFVFLIFANFIST 109 + ++ I++IS++M + + I +F+ IF N ST Sbjct: 68 FVICMIAIIYISIVMSYPNQYKINKDANEIADAKNNKIRTLSHIVFVIFIIAIFTNIAST 127 Query: 110 ILECGLTQCFDNPTFYQL 127 +ECG+ +C DNPT Y L Sbjct: 128 FIECGIHECPDNPTKYIL 145 >gi|310766387|gb|ADP11337.1| hypothetical protein EJP617_16560 [Erwinia sp. Ejp617] Length = 183 Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats. Identities = 54/124 (43%), Positives = 80/124 (64%), Gaps = 3/124 (2%) Query: 8 FNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSLIFSLV 67 FNL G ++ HY ++I+GA+ +ATR V +HI PGD GY +P G+HLYTWSLI ++ Sbjct: 59 FNLYFGNRKLHYGMVIIGALALAAVATRHVFLHITPGDTGYGLPFLGIHLYTWSLILAVA 118 Query: 68 IILFISVLMLFDTAEIK---VAKSPVREIAIYLFVFLIFANFISTILECGLTQCFDNPTF 124 II+ ++V ++ V KS ++ + +F ++ AN ST+L+CG QC DNPT+ Sbjct: 119 IIIGVAVTLMITPDAATAPIVHKSLTQKCLMVIFALMMVANLASTVLQCGGGQCDDNPTY 178 Query: 125 YQLL 128 YQLL Sbjct: 179 YQLL 182 >gi|187931777|ref|YP_001891762.1| disulfide bond formation protein DsbB family [Francisella tularensis subsp. mediasiatica FSC147] gi|187712686|gb|ACD30983.1| disulfide bond formation protein DsbB family [Francisella tularensis subsp. mediasiatica FSC147] Length = 189 Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats. Identities = 42/136 (30%), Positives = 75/136 (55%), Gaps = 13/136 (9%) Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWS 61 IG GFL N+ I+ HY++ +L A+ T ++ RQ+ +H+ +G+ V GMH+Y+W Sbjct: 53 IGFGFLLNMRFNIRPSHYALSLLAAVFTSFVSLRQIALHVT-DPVGFGSKVLGMHMYSWV 111 Query: 62 LIFSLVIILFISVLMLFDTAEIKVAKSP------------VREIAIYLFVFLIFANFIST 109 + S++ I++I+++M + + +I +F+ ++FAN +ST Sbjct: 112 FVISMIAIIYIAIVMSYPRQYELRRQPQQISETKNNIIRLFIQIIFIIFLLVVFANVVST 171 Query: 110 ILECGLTQCFDNPTFY 125 ECGL +C D+PT Y Sbjct: 172 FFECGLHECPDDPTRY 187 >gi|320085627|emb|CBY95405.1| hypothetical protein SENTW_1325 [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] Length = 204 Score = 126 bits (316), Expect = 1e-27, Method: Composition-based stats. Identities = 55/133 (41%), Positives = 86/133 (64%), Gaps = 4/133 (3%) Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60 + G GFLFNL G++ HY ++I+G+I T ++A+RQ+ +HI+PGD GY FG+H YTW Sbjct: 53 IAGFGFLFNLCFGLRGIHYGMVIIGSILTGVMASRQICLHIMPGDTGYGSAFFGLHFYTW 112 Query: 61 SLIFSLVIILFISVLMLFDTAEIKVA----KSPVREIAIYLFVFLIFANFISTILECGLT 116 +LI S++II+ ++V++ + + I ++F+ LI AN IST+LECG Sbjct: 113 TLITSILIIIAVAVVLAISSMNAAFRSLNINPNLFSIVGWVFLLLITANLISTVLECGGG 172 Query: 117 QCFDNPTFYQLLN 129 +C NP Y+LL+ Sbjct: 173 ECAANPVTYKLLS 185 >gi|56708347|ref|YP_170243.1| hypothetical protein FTT_1288 [Francisella tularensis subsp. tularensis SCHU S4] gi|110670818|ref|YP_667375.1| hypothetical protein FTF1288 [Francisella tularensis subsp. tularensis FSC198] gi|224457473|ref|ZP_03665946.1| hypothetical protein FtultM_07362 [Francisella tularensis subsp. tularensis MA00-2987] gi|254370969|ref|ZP_04986973.1| conserved hypothetical protein [Francisella tularensis subsp. tularensis FSC033] gi|254875170|ref|ZP_05247880.1| disulfide bond formation protein DsbB family [Francisella tularensis subsp. tularensis MA00-2987] gi|54114265|gb|AAV29766.1| NT02FT0215 [synthetic construct] gi|56604839|emb|CAG45921.1| conserved hypothetical membrane protein [Francisella tularensis subsp. tularensis SCHU S4] gi|110321151|emb|CAL09304.1| conserved hypothetical membrane protein [Francisella tularensis subsp. tularensis FSC198] gi|151569211|gb|EDN34865.1| conserved hypothetical protein [Francisella tularensis subsp. tularensis FSC033] gi|254841169|gb|EET19605.1| disulfide bond formation protein DsbB family [Francisella tularensis subsp. tularensis MA00-2987] gi|282159586|gb|ADA78977.1| hypothetical protein NE061598_07440 [Francisella tularensis subsp. tularensis NE061598] Length = 189 Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats. Identities = 42/136 (30%), Positives = 75/136 (55%), Gaps = 13/136 (9%) Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWS 61 IG GFL N+ I+ HY++ +L A+ T ++ RQ+ +H+ +G+ V GMH+Y+W Sbjct: 53 IGFGFLLNMRFNIRPSHYALSLLAAVFTSFVSLRQIALHVT-DPVGFGSKVLGMHMYSWV 111 Query: 62 LIFSLVIILFISVLMLFDTAEIKVAKSP------------VREIAIYLFVFLIFANFIST 109 + S++ I++I+++M + + +I +F+ ++FAN +ST Sbjct: 112 FVISMIAIIYIAIVMSYPRQYELRRQPQQISEAKNNIIRLFIQIIFIIFLLVVFANVVST 171 Query: 110 ILECGLTQCFDNPTFY 125 ECGL +C D+PT Y Sbjct: 172 FFECGLHECPDDPTRY 187 >gi|16760750|ref|NP_456367.1| hypothetical protein STY2002 [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|29141492|ref|NP_804834.1| hypothetical protein t1014 [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|213163491|ref|ZP_03349201.1| hypothetical protein Salmoneentericaenterica_27100 [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213424177|ref|ZP_03357042.1| hypothetical protein SentesTyphi_00330 [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213581983|ref|ZP_03363809.1| hypothetical protein SentesTyph_12584 [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] gi|213609962|ref|ZP_03369788.1| hypothetical protein SentesTyp_05317 [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] gi|213648148|ref|ZP_03378201.1| hypothetical protein SentesTy_13194 [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|213857347|ref|ZP_03384318.1| hypothetical protein SentesT_19425 [Salmonella enterica subsp. enterica serovar Typhi str. M223] gi|289825633|ref|ZP_06544810.1| hypothetical protein Salmonellentericaenterica_09396 [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|25513171|pir||AH0730 probable membrane protein STY2002 [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16503047|emb|CAD05546.1| putative membrane protein [Salmonella enterica subsp. enterica serovar Typhi] gi|29137119|gb|AAO68683.1| putative membrane protein [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] Length = 204 Score = 125 bits (315), Expect = 2e-27, Method: Composition-based stats. Identities = 55/133 (41%), Positives = 86/133 (64%), Gaps = 4/133 (3%) Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60 + G GFLFNL G++ HY ++I+G+I T ++A+RQ+ +HI+PGD GY FG+H YTW Sbjct: 53 IAGFGFLFNLCFGLRGIHYGMVIIGSILTGVMASRQICLHIMPGDTGYGSAFFGLHFYTW 112 Query: 61 SLIFSLVIILFISVLMLFDTAEIKVA----KSPVREIAIYLFVFLIFANFISTILECGLT 116 +LI S++II+ ++V++ + + I ++F+ LI AN IST+LECG Sbjct: 113 TLITSILIIIAVAVVLAISSMNAAFRSLNINPNLFSIVGWVFLLLITANLISTVLECGGG 172 Query: 117 QCFDNPTFYQLLN 129 +C NP Y+LL+ Sbjct: 173 ECAANPVTYKLLS 185 >gi|312171047|emb|CBX79306.1| hypothetical protein EAIL5_0486 [Erwinia amylovora ATCC BAA-2158] Length = 183 Score = 125 bits (315), Expect = 2e-27, Method: Composition-based stats. Identities = 53/124 (42%), Positives = 81/124 (65%), Gaps = 3/124 (2%) Query: 8 FNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSLIFSLV 67 FNL G ++ HY ++I GA+ +ATR V +HI+PGD GY +P G+HLYTWSLI ++ Sbjct: 59 FNLYFGNRKLHYGMVIFGALALATVATRHVFLHIMPGDTGYGLPFLGIHLYTWSLILAVA 118 Query: 68 IILFISVLMLFDT---AEIKVAKSPVREIAIYLFVFLIFANFISTILECGLTQCFDNPTF 124 +I+ ++V ++ V KS +I + ++ ++ AN +ST+L+CG QC DNPT+ Sbjct: 119 LIIGVAVTLMITPDAGTPYVVNKSITEKILMIIYALIMVANLLSTVLQCGGGQCDDNPTY 178 Query: 125 YQLL 128 YQLL Sbjct: 179 YQLL 182 >gi|194442392|ref|YP_002041129.1| hypothetical protein SNSL254_A2020 [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|205357369|ref|ZP_03223727.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|207856629|ref|YP_002243280.1| hypothetical protein SEN1172 [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|194401055|gb|ACF61277.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|205322135|gb|EDZ09974.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|206708432|emb|CAR32753.1| putative membrane protein [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] Length = 206 Score = 125 bits (314), Expect = 2e-27, Method: Composition-based stats. Identities = 55/133 (41%), Positives = 87/133 (65%), Gaps = 4/133 (3%) Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60 + G GFLFNL G++ HY ++I+G+I T ++A+RQ+ +HI+PGD GY FG+H YTW Sbjct: 55 IAGFGFLFNLCFGLRGIHYGMVIIGSILTGVMASRQICLHIMPGDTGYGSAFFGLHFYTW 114 Query: 61 SLIFSLVIILFISVLMLFDTAEIKVA----KSPVREIAIYLFVFLIFANFISTILECGLT 116 +LI S++II+ ++V++ + + + I ++F+ LI AN IST+LECG Sbjct: 115 TLITSILIIIAVAVVLAISSMNVAFRSLNINPDLFSIVGWVFLLLITANLISTVLECGGG 174 Query: 117 QCFDNPTFYQLLN 129 +C NP Y+LL+ Sbjct: 175 ECAANPVTYKLLS 187 >gi|205352473|ref|YP_002226274.1| hypothetical protein SG1250 [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|205272254|emb|CAR37130.1| putative membrane protein [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|326627529|gb|EGE33872.1| Putative membrane protein [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 204 Score = 125 bits (314), Expect = 2e-27, Method: Composition-based stats. Identities = 55/133 (41%), Positives = 87/133 (65%), Gaps = 4/133 (3%) Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60 + G GFLFNL G++ HY ++I+G+I T ++A+RQ+ +HI+PGD GY FG+H YTW Sbjct: 53 IAGFGFLFNLCFGLRGIHYGMVIIGSILTGVMASRQICLHIMPGDTGYGSAFFGLHFYTW 112 Query: 61 SLIFSLVIILFISVLMLFDTAEIKVA----KSPVREIAIYLFVFLIFANFISTILECGLT 116 +LI S++II+ ++V++ + + + I ++F+ LI AN IST+LECG Sbjct: 113 TLITSILIIIAVAVVLAISSMNVAFRSLNINPDLFSIVGWVFLLLITANLISTVLECGGG 172 Query: 117 QCFDNPTFYQLLN 129 +C NP Y+LL+ Sbjct: 173 ECAANPVTYKLLS 185 >gi|241668173|ref|ZP_04755751.1| hypothetical protein FphipA2_05361 [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254876708|ref|ZP_05249418.1| conserved hypothetical protein [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254842729|gb|EET21143.1| conserved hypothetical protein [Francisella philomiragia subsp. philomiragia ATCC 25015] Length = 190 Score = 125 bits (314), Expect = 3e-27, Method: Composition-based stats. Identities = 45/138 (32%), Positives = 73/138 (52%), Gaps = 13/138 (9%) Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWS 61 IG GFL N+ I+ HY++ +L A+ T I+ RQ+ +H+ +G+ VFG+H+YTW Sbjct: 53 IGFGFLLNMHYHIRPSHYALSLLAAVLTSFISLRQIALHVS-DPVGFGSTVFGLHMYTWV 111 Query: 62 LIFSLVIILFISVLMLFDTAEI------------KVAKSPVREIAIYLFVFLIFANFIST 109 + ++ I++IS++M + + I +F+ IF N ST Sbjct: 112 FVICMIAIIYISIVMSYPNQYKINKDANEIADAKNNKIRKLSHIVFVIFIIAIFTNIAST 171 Query: 110 ILECGLTQCFDNPTFYQL 127 +ECG+ +C DNPT Y L Sbjct: 172 FIECGIHECPDNPTKYIL 189 >gi|299068597|emb|CBJ39827.1| conserved membrane protein of unknown function [Ralstonia solanacearum CMR15] Length = 168 Score = 124 bits (312), Expect = 4e-27, Method: Composition-based stats. Identities = 46/134 (34%), Positives = 67/134 (50%), Gaps = 7/134 (5%) Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWS 61 G+G NL G + HY++MIL ++ IA RQ+L+HI+PG Y ++G+HLYT + Sbjct: 33 AGVGLALNLRFGARPAHYALMILASLAGAAIAGRQILLHIVPGTGTYGEALWGLHLYTLA 92 Query: 62 LIFSLVIILFISVLMLFDTAE-------IKVAKSPVREIAIYLFVFLIFANFISTILECG 114 I + +I +VL+L + S A+ L L N + T LECG Sbjct: 93 FIAFMAMIAGTAVLLLLERLPDADEGLAKPAPMSRAALAAVALLTVLTLGNVLGTFLECG 152 Query: 115 LTQCFDNPTFYQLL 128 C D+P Y LL Sbjct: 153 GGMCADDPVIYDLL 166 >gi|200390522|ref|ZP_03217133.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|199602967|gb|EDZ01513.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Virchow str. SL491] Length = 204 Score = 124 bits (312), Expect = 4e-27, Method: Composition-based stats. Identities = 55/133 (41%), Positives = 87/133 (65%), Gaps = 4/133 (3%) Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60 + G GFLFNL G++ HY ++I+G+I T ++A+RQ+ +HI+PGD GY FG+H YTW Sbjct: 53 ITGFGFLFNLCFGLRGIHYGMVIIGSILTGVMASRQICLHIMPGDTGYGSAFFGLHFYTW 112 Query: 61 SLIFSLVIILFISVLMLFDTAEIKVA----KSPVREIAIYLFVFLIFANFISTILECGLT 116 +LI S++II+ ++V++ + + + I ++F+ LI AN IST+LECG Sbjct: 113 TLITSILIIIAVAVVLAISSMNVAFRSLNINPNLFSIVGWVFLLLITANLISTVLECGGG 172 Query: 117 QCFDNPTFYQLLN 129 +C NP Y+LL+ Sbjct: 173 ECAANPVTYKLLS 185 >gi|56413218|ref|YP_150293.1| hypothetical protein SPA1008 [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197362143|ref|YP_002141780.1| hypothetical protein SSPA0940 [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|56127475|gb|AAV76981.1| putative membrane protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197093620|emb|CAR59089.1| putative membrane protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] Length = 204 Score = 124 bits (312), Expect = 4e-27, Method: Composition-based stats. Identities = 55/133 (41%), Positives = 86/133 (64%), Gaps = 4/133 (3%) Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60 + G GFLFNL G++ HY ++I+G+I T ++A+RQ+ +HI+PGD GY FG+H YTW Sbjct: 53 IAGFGFLFNLCFGLRGIHYGMVIIGSILTGVMASRQMCLHIMPGDTGYGSAFFGLHFYTW 112 Query: 61 SLIFSLVIILFISVLMLFDTAEIKVA----KSPVREIAIYLFVFLIFANFISTILECGLT 116 +LI S++II+ ++V++ + + I ++F+ LI AN IST+LECG Sbjct: 113 TLITSILIIIAVAVVLAISSMNAAFRSLNINPNLFSIVGWVFLLLITANLISTVLECGGG 172 Query: 117 QCFDNPTFYQLLN 129 +C NP Y+LL+ Sbjct: 173 ECAANPVTYKLLS 185 >gi|259909747|ref|YP_002650103.1| hypothetical protein EpC_31220 [Erwinia pyrifoliae Ep1/96] gi|224965369|emb|CAX56901.1| putative membrane protein [Erwinia pyrifoliae Ep1/96] Length = 183 Score = 123 bits (310), Expect = 6e-27, Method: Composition-based stats. Identities = 53/124 (42%), Positives = 79/124 (63%), Gaps = 3/124 (2%) Query: 8 FNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSLIFSLV 67 FNL G ++ HY ++I+GA+ +ATR V +HI PGD GY +P G+HLYTWSLI ++ Sbjct: 59 FNLYFGNRKLHYGMVIIGALALAAVATRHVFLHITPGDTGYGLPFLGIHLYTWSLILAVA 118 Query: 68 IILFISVLMLFDTAEIK---VAKSPVREIAIYLFVFLIFANFISTILECGLTQCFDNPTF 124 II+ ++V ++ V KS + + ++ ++ AN ST+L+CG QC DNPT+ Sbjct: 119 IIIGVAVTLMITPDAATAPVVIKSFTQRFLMIIYALILVANLSSTVLQCGGGQCDDNPTY 178 Query: 125 YQLL 128 YQLL Sbjct: 179 YQLL 182 >gi|198243055|ref|YP_002215275.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|197937571|gb|ACH74904.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|326623020|gb|EGE29365.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Dublin str. 3246] Length = 204 Score = 123 bits (310), Expect = 6e-27, Method: Composition-based stats. Identities = 55/133 (41%), Positives = 87/133 (65%), Gaps = 4/133 (3%) Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60 + G GFLFNL G++ HY ++I+G+I T ++A+RQ+ +HI+PGD GY FG+H YTW Sbjct: 53 IAGFGFLFNLCFGLRGIHYGMVIIGSILTGVMASRQICLHIMPGDTGYGSAFFGLHFYTW 112 Query: 61 SLIFSLVIILFISVLMLFDTAEIKVA----KSPVREIAIYLFVFLIFANFISTILECGLT 116 +LI S++II+ ++V++ + + + I ++F+ LI AN IST+LECG Sbjct: 113 TLITSILIIIAVAVVLAISSMNVAFRSLNINPVLFSIVGWVFLLLITANLISTVLECGGG 172 Query: 117 QCFDNPTFYQLLN 129 +C NP Y+LL+ Sbjct: 173 ECAANPVTYKLLS 185 >gi|52840653|ref|YP_094452.1| inner (transmembrane) protein [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|52627764|gb|AAU26505.1| inner (transmembrane) protein [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 182 Score = 122 bits (308), Expect = 1e-26, Method: Composition-based stats. Identities = 58/130 (44%), Positives = 82/130 (63%), Gaps = 2/130 (1%) Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWS 61 +G+ F+ NL+ GI+ HY +M+L + I+ RQ+ IH+ PGD GY +FG+HLYTWS Sbjct: 51 VGLCFVMNLMLGIRASHYGLMLLATLLGLSISVRQMYIHLTPGDPGYGGLIFGLHLYTWS 110 Query: 62 LIFSLVIILFISVLMLFDTAEIK--VAKSPVREIAIYLFVFLIFANFISTILECGLTQCF 119 I LVIIL I+ ++ D + +S ++ I++F LI AN IST LECG +C Sbjct: 111 AIIFLVIILLIAGALILDKGFMPDYKVRSKSAKVMIWVFFILILANGISTFLECGPHECP 170 Query: 120 DNPTFYQLLN 129 DNP+ Y LLN Sbjct: 171 DNPSKYYLLN 180 >gi|160872578|ref|ZP_02062710.1| disulfide bond formation protein DsbB family [Rickettsiella grylli] gi|159121377|gb|EDP46715.1| disulfide bond formation protein DsbB family [Rickettsiella grylli] Length = 234 Score = 122 bits (307), Expect = 1e-26, Method: Composition-based stats. Identities = 46/132 (34%), Positives = 73/132 (55%), Gaps = 6/132 (4%) Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWS 61 I GFL N+ I+ HY++ +L A+ T I+TRQ+ +H+ PGD GY +P+FG+HLYTW Sbjct: 93 IAFGFLLNVQFKIRPVHYALSLLSAMLTAAISTRQIFLHVAPGDQGYGLPLFGLHLYTWV 152 Query: 62 LIFSLVIILFISVLML------FDTAEIKVAKSPVREIAIYLFVFLIFANFISTILECGL 115 I + II++IS++ ++ ++ L N I+T LECG+ Sbjct: 153 FILCVAIIIYISIIFSIFPQYQYEEPPKTKTMKLLKHATFAAVFVLAIFNGIATYLECGI 212 Query: 116 TQCFDNPTFYQL 127 C +NP Y++ Sbjct: 213 KVCPENPVHYEI 224 >gi|300696744|ref|YP_003747405.1| hypothetical protein RCFBP_mp10194 [Ralstonia solanacearum CFBP2957] gi|299073468|emb|CBJ52984.1| conserved membrane protein of unknown function [Ralstonia solanacearum CFBP2957] Length = 188 Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats. Identities = 47/138 (34%), Positives = 68/138 (49%), Gaps = 11/138 (7%) Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWS 61 +G+G NL G + HY++MIL ++ +IA RQVL+HI+PG Y ++G+HLYT + Sbjct: 49 VGVGLALNLCFGARPAHYALMILASLGGAVIAGRQVLLHIVPGTGTYGEALWGLHLYTLA 108 Query: 62 LIFSLVIILFISVLMLFDT-----------AEIKVAKSPVREIAIYLFVFLIFANFISTI 110 I VII +V++ + S A+ L L N + T Sbjct: 109 FIAFSVIIAGTAVMLFLERLPDADEGTAGVPREPSLTSRAALAAVALLTVLTLGNVVGTF 168 Query: 111 LECGLTQCFDNPTFYQLL 128 LECG C D+P Y LL Sbjct: 169 LECGTGMCADDPVIYDLL 186 >gi|51246282|ref|YP_066166.1| hypothetical protein DP2430 [Desulfotalea psychrophila LSv54] gi|50877319|emb|CAG37159.1| hypothetical membrane protein [Desulfotalea psychrophila LSv54] Length = 195 Score = 122 bits (306), Expect = 2e-26, Method: Composition-based stats. Identities = 42/129 (32%), Positives = 71/129 (55%), Gaps = 4/129 (3%) Query: 4 IGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSLI 63 IG + NL G++ HY I+++ A+ + RQ+L+HI+PG Y P++G H+YTW+ I Sbjct: 66 IGAVLNLNFGMRTSHYGIILISALFGMAGSVRQILLHIVPGTGNYGAPIWGYHMYTWAGI 125 Query: 64 FSLVIILFISVLMLFDTA-EIKVAKSPVREIAIYLFVFLIFANF---ISTILECGLTQCF 119 ++F ++++L + + + + Y+ +F I + + T ECGL QC Sbjct: 126 AFFCSLVFSAIMLLQERTITLGMIVQQRDKATRYITIFAITLSLTLVVLTFAECGLGQCP 185 Query: 120 DNPTFYQLL 128 DNPT Y L Sbjct: 186 DNPTRYWLF 194 >gi|207722325|ref|YP_002252761.1| hypothetical protein RSMK04922 [Ralstonia solanacearum MolK2] gi|206587502|emb|CAQ18084.1| conserved hypothetical protein [Ralstonia solanacearum MolK2] Length = 174 Score = 121 bits (303), Expect = 4e-26, Method: Composition-based stats. Identities = 47/140 (33%), Positives = 69/140 (49%), Gaps = 13/140 (9%) Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILP--GDLGYSIPVFGMHLYT 59 +G+G NL G + HY++MIL ++ +IA RQVL+HI+P G Y ++G+HLYT Sbjct: 33 VGVGLALNLRFGARPAHYALMILASLGGAVIAGRQVLLHIVPGTGTGTYGEALWGLHLYT 92 Query: 60 WSLIFSLVIILFISVLMLFDT-----------AEIKVAKSPVREIAIYLFVFLIFANFIS 108 + I VII +V++ + S A+ L L N + Sbjct: 93 LAFIAFSVIIAGTAVMLFLERLPEADEGTARLPREPSLTSRAALAAVALLTVLTLGNVVG 152 Query: 109 TILECGLTQCFDNPTFYQLL 128 T LECG C D+P Y+LL Sbjct: 153 TFLECGAGMCADDPGAYELL 172 >gi|194738032|ref|YP_002114899.1| hypothetical protein SeSA_A2012 [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197301067|ref|ZP_03166277.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|194713534|gb|ACF92755.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197288641|gb|EDY28016.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] Length = 206 Score = 120 bits (302), Expect = 5e-26, Method: Composition-based stats. Identities = 55/133 (41%), Positives = 87/133 (65%), Gaps = 4/133 (3%) Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60 + G GFLFNL G++ HY ++I+G+I T ++A+RQ+ +HI+PGD GY FG+H YTW Sbjct: 55 IAGFGFLFNLCFGLRGIHYGMVIIGSILTGVMASRQICLHIMPGDTGYGSAFFGLHFYTW 114 Query: 61 SLIFSLVIILFISVLMLFDTAEIKVA----KSPVREIAIYLFVFLIFANFISTILECGLT 116 +LI S++II+ ++V++ + + + I ++F+ LI AN IST+LECG Sbjct: 115 TLITSILIIIAVAVILAISSMNVAFRSLNINPDLFSIVGWVFLLLITANLISTVLECGGG 174 Query: 117 QCFDNPTFYQLLN 129 +C NP Y+LL+ Sbjct: 175 ECAANPVTYKLLS 187 >gi|205358999|ref|ZP_03224187.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|205339493|gb|EDZ26257.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] Length = 206 Score = 120 bits (302), Expect = 5e-26, Method: Composition-based stats. Identities = 55/133 (41%), Positives = 87/133 (65%), Gaps = 4/133 (3%) Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60 + G GFLFNL G++ HY ++I+G+I T ++A+RQ+ +HI+PGD GY FG+H YTW Sbjct: 55 IAGFGFLFNLCFGLRGIHYGMVIIGSILTGVMASRQICLHIMPGDTGYGSAFFGLHFYTW 114 Query: 61 SLIFSLVIILFISVLMLFDTAEIKVA----KSPVREIAIYLFVFLIFANFISTILECGLT 116 +LI S++II+ ++V++ + + + I ++F+ LI AN IST+LECG Sbjct: 115 TLITSILIIIAVAVILAISSMNVAFRSLNINPDLFSIVGWVFLLLITANLISTVLECGGG 174 Query: 117 QCFDNPTFYQLLN 129 +C NP Y+LL+ Sbjct: 175 ECAANPVTYKLLS 187 >gi|16765205|ref|NP_460820.1| inner membrane protein [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|167993831|ref|ZP_02574924.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|168462619|ref|ZP_02696550.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|194451478|ref|YP_002045916.1| hypothetical protein SeHA_C2074 [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|197261831|ref|ZP_03161905.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|204931001|ref|ZP_03221827.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|16420398|gb|AAL20779.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|194409782|gb|ACF70001.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|195634091|gb|EDX52443.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197240086|gb|EDY22706.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|204320045|gb|EDZ05250.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205328218|gb|EDZ14982.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|267993834|gb|ACY88719.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301158386|emb|CBW17889.1| putative membrane protein [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312912858|dbj|BAJ36832.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|321224505|gb|EFX49568.1| Putative inner membrane protein [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|322616860|gb|EFY13768.1| hypothetical protein SEEM315_15824 [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322618099|gb|EFY14991.1| hypothetical protein SEEM971_05198 [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322625770|gb|EFY22589.1| hypothetical protein SEEM973_08997 [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322626220|gb|EFY23030.1| hypothetical protein SEEM974_05795 [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322633826|gb|EFY30566.1| hypothetical protein SEEM201_02204 [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322638980|gb|EFY35673.1| hypothetical protein SEEM202_10198 [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322640518|gb|EFY37170.1| hypothetical protein SEEM954_02430 [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322644185|gb|EFY40730.1| hypothetical protein SEEM054_02737 [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322648391|gb|EFY44845.1| hypothetical protein SEEM675_10827 [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322655415|gb|EFY51723.1| hypothetical protein SEEM965_14118 [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322660829|gb|EFY57060.1| hypothetical protein SEEM19N_10393 [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322662875|gb|EFY59082.1| hypothetical protein SEEM801_18882 [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322668059|gb|EFY64218.1| hypothetical protein SEEM507_21346 [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322674179|gb|EFY70273.1| hypothetical protein SEEM877_13623 [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322675466|gb|EFY71540.1| hypothetical protein SEEM867_03512 [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322683119|gb|EFY79135.1| hypothetical protein SEEM180_11192 [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322686813|gb|EFY82791.1| hypothetical protein SEEM600_19185 [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323130142|gb|ADX17572.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|323195295|gb|EFZ80475.1| hypothetical protein SEEM581_08834 [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323199188|gb|EFZ84283.1| hypothetical protein SEEM501_00410 [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323202999|gb|EFZ88032.1| hypothetical protein SEEM460_02801 [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323207444|gb|EFZ92392.1| hypothetical protein SEEM020_07033 [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323209933|gb|EFZ94845.1| hypothetical protein SEEM6152_06518 [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323217427|gb|EGA02146.1| hypothetical protein SEEM0077_21182 [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323224646|gb|EGA08919.1| hypothetical protein SEEM0055_00781 [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323231449|gb|EGA15562.1| hypothetical protein SEEM0052_14546 [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323235890|gb|EGA19969.1| hypothetical protein SEEM3312_13514 [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323240459|gb|EGA24502.1| hypothetical protein SEEM5258_10806 [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323245352|gb|EGA29352.1| hypothetical protein SEEM1156_16456 [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323246718|gb|EGA30690.1| hypothetical protein SEEM9199_07591 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323253573|gb|EGA37401.1| hypothetical protein SEEM8282_15368 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323257720|gb|EGA41403.1| hypothetical protein SEEM8283_00622 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323260383|gb|EGA43999.1| hypothetical protein SEEM8284_20548 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323266825|gb|EGA50311.1| hypothetical protein SEEM8285_18889 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323269031|gb|EGA52487.1| hypothetical protein SEEM8287_03672 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] gi|332988754|gb|AEF07737.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 204 Score = 120 bits (302), Expect = 6e-26, Method: Composition-based stats. Identities = 55/133 (41%), Positives = 87/133 (65%), Gaps = 4/133 (3%) Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60 + G GFLFNL G++ HY ++I+G+I T ++A+RQ+ +HI+PGD GY FG+H YTW Sbjct: 53 IAGFGFLFNLCFGLRGIHYGMVIIGSILTGVMASRQICLHIMPGDTGYGSAFFGLHFYTW 112 Query: 61 SLIFSLVIILFISVLMLFDTAEIKVA----KSPVREIAIYLFVFLIFANFISTILECGLT 116 +LI S++II+ ++V++ + + + I ++F+ LI AN IST+LECG Sbjct: 113 TLITSILIIIAVAVILAISSMNVAFRSLNINPDLFSIVGWVFLLLITANLISTVLECGGG 172 Query: 117 QCFDNPTFYQLLN 129 +C NP Y+LL+ Sbjct: 173 ECAANPVTYKLLS 185 >gi|241668105|ref|ZP_04755683.1| DsbB family disulfide bond formation protein [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254876640|ref|ZP_05249350.1| disulfide bond formation protein [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254842661|gb|EET21075.1| disulfide bond formation protein [Francisella philomiragia subsp. philomiragia ATCC 25015] Length = 178 Score = 120 bits (302), Expect = 6e-26, Method: Composition-based stats. Identities = 43/119 (36%), Positives = 66/119 (55%), Gaps = 1/119 (0%) Query: 12 SGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSLIFSLVIILF 71 G K ++Y + L AI +A Q+L+HI+PG Y VF +H+YTW+ I S++ I++ Sbjct: 59 HGNKYKNYLFVTLVAILNAAMAMTQILLHIVPGTGNYGDAVFSLHMYTWNFIVSIIFIIY 118 Query: 72 ISVLMLFDTAEIKVAK-SPVREIAIYLFVFLIFANFISTILECGLTQCFDNPTFYQLLN 129 ++ F E K + +IAI+L + L AN I+ +ECG C +P Y LLN Sbjct: 119 ATICGFFTPNEDKKKNLNLFTKIAIFLILALTLANTINVFVECGPHLCPSDPDSYWLLN 177 >gi|167627537|ref|YP_001678037.1| DsbB family disulfide bond formation protein [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|167597538|gb|ABZ87536.1| disulfide bond formation protein, DsbB family [Francisella philomiragia subsp. philomiragia ATCC 25017] Length = 178 Score = 120 bits (302), Expect = 6e-26, Method: Composition-based stats. Identities = 43/119 (36%), Positives = 66/119 (55%), Gaps = 1/119 (0%) Query: 12 SGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSLIFSLVIILF 71 G K ++Y + L AI +A Q+L+HI+PG Y VF +H+YTW+ I S++ I++ Sbjct: 59 HGNKYKNYLFVTLVAILNAAMAMTQILLHIVPGTGNYGDAVFSLHMYTWNFIVSIIFIIY 118 Query: 72 ISVLMLFD-TAEIKVAKSPVREIAIYLFVFLIFANFISTILECGLTQCFDNPTFYQLLN 129 ++ F + K S ++AI+L + L AN IS +ECG C +P Y LLN Sbjct: 119 ATICGFFTLNEDKKKNLSLFAKVAIFLILALTLANTISVFIECGPHLCPSDPDSYWLLN 177 >gi|168259875|ref|ZP_02681848.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|205350713|gb|EDZ37344.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] Length = 204 Score = 120 bits (301), Expect = 7e-26, Method: Composition-based stats. Identities = 55/133 (41%), Positives = 87/133 (65%), Gaps = 4/133 (3%) Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60 + G GFLFNL G++ HY ++I+G+I T ++A+RQ+ +HI+PGD GY FG+H YTW Sbjct: 53 IAGFGFLFNLCFGLRGIHYGMVIIGSILTGVMASRQICLHIMPGDTGYGSAFFGLHFYTW 112 Query: 61 SLIFSLVIILFISVLMLFDTAEIKVA----KSPVREIAIYLFVFLIFANFISTILECGLT 116 +LI S++II+ ++V++ + + + I ++F+ LI AN IST+LECG Sbjct: 113 TLITSILIIIAVAVILAISSMNVAFRSLNINPDLFSIVGWVFLLLITANLISTVLECGGG 172 Query: 117 QCFDNPTFYQLLN 129 +C NP Y+LL+ Sbjct: 173 ECAANPVTYKLLS 185 >gi|148360976|ref|YP_001252183.1| transmembrane protein [Legionella pneumophila str. Corby] gi|296105958|ref|YP_003617658.1| inner (transmembrane) protein [Legionella pneumophila 2300/99 Alcoy] gi|148282749|gb|ABQ56837.1| inner (transmembrane) protein [Legionella pneumophila str. Corby] gi|295647859|gb|ADG23706.1| inner (transmembrane) protein [Legionella pneumophila 2300/99 Alcoy] Length = 182 Score = 120 bits (301), Expect = 8e-26, Method: Composition-based stats. Identities = 57/130 (43%), Positives = 81/130 (62%), Gaps = 2/130 (1%) Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWS 61 +G+ F+ NL+ GI+ HY +M+L ++ I+ RQ+ IH+ PGD GY G+HLYTWS Sbjct: 51 VGLCFVMNLMLGIRASHYGLMLLASLLGLSISVRQMYIHLTPGDPGYGGLFLGLHLYTWS 110 Query: 62 LIFSLVIILFISVLMLFDTAEIK--VAKSPVREIAIYLFVFLIFANFISTILECGLTQCF 119 I LVIIL I+ ++ D + +S ++ I++F LI AN IST LECG +C Sbjct: 111 AIIFLVIILLIAGALILDKGFMPDYKVRSKSAKVMIWVFFILILANGISTFLECGPHECP 170 Query: 120 DNPTFYQLLN 129 DNP+ Y LLN Sbjct: 171 DNPSKYYLLN 180 >gi|62180435|ref|YP_216852.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|224583639|ref|YP_002637437.1| hypothetical protein SPC_1858 [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|62128068|gb|AAX65771.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|224468166|gb|ACN45996.1| hypothetical protein SPC_1858 [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|322714908|gb|EFZ06479.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] Length = 204 Score = 119 bits (300), Expect = 9e-26, Method: Composition-based stats. Identities = 55/133 (41%), Positives = 87/133 (65%), Gaps = 4/133 (3%) Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60 + G GFLFNL G++ HY ++I+G+I T ++A+RQ+ +HI+PGD GY FG+H YTW Sbjct: 53 IAGFGFLFNLCFGLRGIHYGMVIIGSILTGVMASRQMCLHIMPGDTGYGSTFFGLHFYTW 112 Query: 61 SLIFSLVIILFISVLMLFDTAEIKVA----KSPVREIAIYLFVFLIFANFISTILECGLT 116 +LI S++II+ ++V++ + + + I ++F+ LI AN IST+LECG Sbjct: 113 TLITSILIIIAVAVILAISSMNVAFRSLNINPDLFSIVGWVFLLLITANLISTVLECGGG 172 Query: 117 QCFDNPTFYQLLN 129 +C NP Y+LL+ Sbjct: 173 ECAANPVTYKLLS 185 >gi|54296443|ref|YP_122812.1| hypothetical protein lpp0474 [Legionella pneumophila str. Paris] gi|53750228|emb|CAH11622.1| hypothetical protein lpp0474 [Legionella pneumophila str. Paris] Length = 182 Score = 119 bits (298), Expect = 2e-25, Method: Composition-based stats. Identities = 57/130 (43%), Positives = 81/130 (62%), Gaps = 2/130 (1%) Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWS 61 +G+ F+ NL+ GI+ HY +M+L ++ I+ RQ+ IH+ PGD GY G+HLYTWS Sbjct: 51 VGLCFVMNLMLGIRASHYGLMLLASLLGLSISVRQMYIHLTPGDPGYGGLFLGLHLYTWS 110 Query: 62 LIFSLVIILFISVLMLFDTAEIK--VAKSPVREIAIYLFVFLIFANFISTILECGLTQCF 119 I LVIIL I+ ++ D + +S ++ I++F LI AN IST LECG +C Sbjct: 111 AIIFLVIILLIAGALILDKGLMPDYKVRSKSAKVMIWVFFILILANGISTFLECGPHECP 170 Query: 120 DNPTFYQLLN 129 DNP+ Y LLN Sbjct: 171 DNPSKYYLLN 180 >gi|54293401|ref|YP_125816.1| hypothetical protein lpl0450 [Legionella pneumophila str. Lens] gi|53753233|emb|CAH14680.1| hypothetical protein lpl0450 [Legionella pneumophila str. Lens] gi|307609216|emb|CBW98680.1| hypothetical protein LPW_04891 [Legionella pneumophila 130b] Length = 182 Score = 119 bits (298), Expect = 2e-25, Method: Composition-based stats. Identities = 57/130 (43%), Positives = 81/130 (62%), Gaps = 2/130 (1%) Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWS 61 +G+ F+ NL+ GI+ HY +M+L ++ I+ RQ+ IH+ PGD GY G+HLYTWS Sbjct: 51 VGLCFVMNLMLGIRASHYGLMLLASLLGLSISVRQMYIHLTPGDPGYGGLFLGLHLYTWS 110 Query: 62 LIFSLVIILFISVLMLFDTAEIK--VAKSPVREIAIYLFVFLIFANFISTILECGLTQCF 119 I LVIIL I+ ++ D + +S ++ I++F LI AN IST LECG +C Sbjct: 111 AIIFLVIILLIAGALILDKGLMPDYKVRSKSAKVMIWVFFILILANGISTFLECGPHECP 170 Query: 120 DNPTFYQLLN 129 DNP+ Y LLN Sbjct: 171 DNPSKYYLLN 180 >gi|170728156|ref|YP_001762182.1| disulfide bond formation protein DsbB [Shewanella woodyi ATCC 51908] gi|169813503|gb|ACA88087.1| Disulphide bond formation protein DsbB [Shewanella woodyi ATCC 51908] Length = 482 Score = 117 bits (294), Expect = 5e-25, Method: Composition-based stats. Identities = 29/133 (21%), Positives = 59/133 (44%), Gaps = 6/133 (4%) Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDL-GYSIPVFGMHLYT 59 ++ + +F G+K ++ +IL ++ R HIL G+ +FG+H Y Sbjct: 52 LVALIAIFITRYGLKPKYLGALILASVYGLWAGYRHSSNHILKDIGQGFGPAIFGVHTYV 111 Query: 60 WSLIFSLVIILFISVLML-----FDTAEIKVAKSPVREIAIYLFVFLIFANFISTILECG 114 W ++ LVI+LF +VL++ E K + + + + +F+ +I N + + G Sbjct: 112 WVMVVFLVILLFAAVLLMLQGDKLSEKEDKNSWTLLNRSTVMVFLVVIGFNIVQAFSQTG 171 Query: 115 LTQCFDNPTFYQL 127 Y++ Sbjct: 172 PFPFIGQSDPYRM 184 >gi|156502603|ref|YP_001428668.1| hypothetical protein FTA_1237 [Francisella tularensis subsp. holarctica FTNF002-00] gi|156253206|gb|ABU61712.1| hypothetical membrane protein [Francisella tularensis subsp. holarctica FTNF002-00] Length = 194 Score = 117 bits (293), Expect = 6e-25, Method: Composition-based stats. Identities = 42/136 (30%), Positives = 75/136 (55%), Gaps = 13/136 (9%) Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWS 61 IG GFL N+ I+ HY++ +L A+ T I+ RQ+ +H+ +G+ V GMH+Y+W Sbjct: 58 IGFGFLLNMRFNIRPSHYALSLLAAVFTSFISLRQIALHVT-DPVGFGSKVLGMHMYSWV 116 Query: 62 LIFSLVIILFISVLMLFDTAEIKVAKSP------------VREIAIYLFVFLIFANFIST 109 + S++ I++I++++ + + +I +F+ ++FAN +ST Sbjct: 117 FVISMIAIIYIAIVISYPRQYELRRQPQQISEAKNNIIRLFIQIIFIIFLLVVFANVVST 176 Query: 110 ILECGLTQCFDNPTFY 125 ECGL +C D+PT Y Sbjct: 177 FFECGLHECPDDPTRY 192 >gi|157963725|ref|YP_001503759.1| disulfide bond formation protein DsbB [Shewanella pealeana ATCC 700345] gi|157848725|gb|ABV89224.1| Disulphide bond formation protein DsbB [Shewanella pealeana ATCC 700345] Length = 484 Score = 117 bits (293), Expect = 6e-25, Method: Composition-based stats. Identities = 28/132 (21%), Positives = 56/132 (42%), Gaps = 8/132 (6%) Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDL-GYSIPVFGMHLYT 59 ++ + +F + G+K ++ +I+ A+ R HIL G+ +FG+H Y Sbjct: 51 LVSLIAIFIMRYGLKPKYIGALIITAVYGLWAGYRHSSAHILRDIGQGFGPAIFGVHTYV 110 Query: 60 WSLIFSLVIILFISVLMLFD-----TAEIKVAKSPVREIAIYLFVFLIFANFISTILECG 114 W ++ +I+LF VLML S + ++ + +F+ +I N + + G Sbjct: 111 WVIVVFAIILLFAGVLMLLQGDKLVEKSDSSEWSLLNKVTVNVFLVIICFNIVQAFTQTG 170 Query: 115 LTQCFD--NPTF 124 +P Sbjct: 171 PFPYIGQSDPVR 182 >gi|49474632|ref|YP_032674.1| hypothetical protein BQ11240 [Bartonella quintana str. Toulouse] gi|49240136|emb|CAF26585.1| hypothetical protein BQ11240 [Bartonella quintana str. Toulouse] Length = 196 Score = 116 bits (292), Expect = 8e-25, Method: Composition-based stats. Identities = 48/133 (36%), Positives = 78/133 (58%), Gaps = 4/133 (3%) Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60 + G GFLFN+ +++ HY ++ILG + CI A RQ+ + I GDLG +FG+HLY W Sbjct: 57 IAGCGFLFNIHLRVRKIHYGMVILGCMVICISAARQIFLQITLGDLGDGPTLFGLHLYIW 116 Query: 61 SLIFSLVIILFISVLMLFDTAEIKVAK----SPVREIAIYLFVFLIFANFISTILECGLT 116 + I + + + ++ +M+ K + +A +LFVFLI AN ++ ILECG Sbjct: 117 AFIIAGLCLFAVAFIMILSEWTRKFKVFSPFPRLGGMASFLFVFLIAANLLTAILECGSG 176 Query: 117 QCFDNPTFYQLLN 129 C ++P Y++L+ Sbjct: 177 LCTNDPVKYEVLS 189 >gi|167622296|ref|YP_001672590.1| disulfide bond formation protein DsbB [Shewanella halifaxensis HAW-EB4] gi|167352318|gb|ABZ74931.1| Disulphide bond formation protein DsbB [Shewanella halifaxensis HAW-EB4] Length = 483 Score = 115 bits (288), Expect = 2e-24, Method: Composition-based stats. Identities = 29/132 (21%), Positives = 56/132 (42%), Gaps = 8/132 (6%) Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDL-GYSIPVFGMHLYT 59 ++ + +F + G+K ++ +I+ A+ R HIL G+ +FG+H Y Sbjct: 50 LVSLIAIFIMRYGLKPKYIGALIITAVYGLWAGYRHSSAHILRDIGQGFGPAIFGVHTYV 109 Query: 60 WSLIFSLVIILFISVLMLFD-----TAEIKVAKSPVREIAIYLFVFLIFANFISTILECG 114 W ++ +I+LF VLML S + +I + +F+ +I N + + G Sbjct: 110 WVIVVFAIILLFAGVLMLLQGDKLVEKSDSSEWSLLNKITVNVFLVIIGFNIVQAFTQTG 169 Query: 115 LTQCFD--NPTF 124 +P Sbjct: 170 PFPYIGQSDPVR 181 >gi|89256495|ref|YP_513857.1| hypothetical protein FTL_1173 [Francisella tularensis subsp. holarctica LVS] gi|115314925|ref|YP_763648.1| hypothetical protein FTH_1146 [Francisella tularensis subsp. holarctica OSU18] gi|167011114|ref|ZP_02276045.1| hypothetical protein Ftulh_10473 [Francisella tularensis subsp. holarctica FSC200] gi|254367827|ref|ZP_04983847.1| hypothetical protein FTHG_01111 [Francisella tularensis subsp. holarctica 257] gi|89144326|emb|CAJ79612.1| conserved hypothetical membrane protein [Francisella tularensis subsp. holarctica LVS] gi|115129824|gb|ABI83011.1| conserved hypothetical protein [Francisella tularensis subsp. holarctica OSU18] gi|134253637|gb|EBA52731.1| hypothetical protein FTHG_01111 [Francisella tularensis subsp. holarctica 257] Length = 189 Score = 115 bits (288), Expect = 3e-24, Method: Composition-based stats. Identities = 41/136 (30%), Positives = 75/136 (55%), Gaps = 13/136 (9%) Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWS 61 IG GFL N+ I+ HY++ +L A+ T ++ RQ+ +H+ +G+ V GMH+Y+W Sbjct: 53 IGFGFLLNMRFNIRPSHYALSLLAAVFTSFVSLRQIALHVT-DPVGFGSKVLGMHMYSWV 111 Query: 62 LIFSLVIILFISVLMLFDTAEIKVAKSP------------VREIAIYLFVFLIFANFIST 109 + S++ I++I++++ + + +I +F+ ++FAN +ST Sbjct: 112 FVISMIAIIYIAIVISYPRQYELRRQPQQISEAKNNIIRLFIQIIFIIFLLVVFANVVST 171 Query: 110 ILECGLTQCFDNPTFY 125 ECGL +C D+PT Y Sbjct: 172 FFECGLHECPDDPTRY 187 >gi|290953960|ref|ZP_06558581.1| hypothetical protein FtulhU_06713 [Francisella tularensis subsp. holarctica URFT1] gi|295312637|ref|ZP_06803387.1| hypothetical protein FtulhU_06705 [Francisella tularensis subsp. holarctica URFT1] Length = 189 Score = 114 bits (287), Expect = 3e-24, Method: Composition-based stats. Identities = 42/136 (30%), Positives = 75/136 (55%), Gaps = 13/136 (9%) Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWS 61 IG GFL N+ I+ HY++ +L A+ T I+ RQ+ +H+ +G+ V GMH+Y+W Sbjct: 53 IGFGFLLNMRFNIRPSHYALSLLAAVFTSFISLRQIALHVT-DPVGFGSKVLGMHMYSWV 111 Query: 62 LIFSLVIILFISVLMLFDTAEIKVAKSP------------VREIAIYLFVFLIFANFIST 109 + S++ I++I++++ + + +I +F+ ++FAN +ST Sbjct: 112 FVISMIAIIYIAIVISYPRQYELRRQPQQISEAKNNIIRLFIQIIFIIFLLVVFANVVST 171 Query: 110 ILECGLTQCFDNPTFY 125 ECGL +C D+PT Y Sbjct: 172 FFECGLHECPDDPTRY 187 >gi|254369614|ref|ZP_04985625.1| conserved hypothetical protein [Francisella tularensis subsp. holarctica FSC022] gi|157122568|gb|EDO66703.1| conserved hypothetical protein [Francisella tularensis subsp. holarctica FSC022] Length = 189 Score = 114 bits (286), Expect = 4e-24, Method: Composition-based stats. Identities = 41/136 (30%), Positives = 75/136 (55%), Gaps = 13/136 (9%) Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWS 61 IG GFL N+ I+ HY++ +L A+ T ++ RQ+ +H+ +G+ V GMH+Y+W Sbjct: 53 IGFGFLLNMRFNIRPSHYALSLLAAVFTSFVSLRQIALHVT-DPVGFGSKVLGMHMYSWV 111 Query: 62 LIFSLVIILFISVLMLFDTAEIKVAKSP------------VREIAIYLFVFLIFANFIST 109 + S++ I++I++++ + + +I +F+ ++FAN +ST Sbjct: 112 FVISMIAIIYIAIVISYPRQYELRRQPQQISEAKNNIIRLFIQIIFIIFLLVVFANVVST 171 Query: 110 ILECGLTQCFDNPTFY 125 ECGL +C D+PT Y Sbjct: 172 FFECGLHECPDDPTRY 187 >gi|62257904|gb|AAX77752.1| unknown protein [synthetic construct] Length = 216 Score = 112 bits (282), Expect = 1e-23, Method: Composition-based stats. Identities = 40/119 (33%), Positives = 66/119 (55%), Gaps = 1/119 (0%) Query: 12 SGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSLIFSLVIILF 71 G +HY ++IL A+ +A Q+L+HI+PG Y VF +H+YTW+ I S++ IL+ Sbjct: 88 HGNNYKHYLLIILVALLNAAMAITQILLHIVPGTGNYGEAVFSLHMYTWNFIVSIIFILY 147 Query: 72 ISVL-MLFDTAEIKVAKSPVREIAIYLFVFLIFANFISTILECGLTQCFDNPTFYQLLN 129 ++ ++ K S + ++AI L + L AN ++ +ECG C +P Y L N Sbjct: 148 AAICGLITPNENKKKKLSILAKLAIILILILTVANTLNVFVECGPHLCPSDPNSYWLFN 206 >gi|261886322|ref|ZP_06010361.1| DsbB family disulfide bond formation protein [Campylobacter fetus subsp. venerealis str. Azul-94] Length = 498 Score = 112 bits (282), Expect = 1e-23, Method: Composition-based stats. Identities = 23/137 (16%), Positives = 55/137 (40%), Gaps = 11/137 (8%) Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDL-GYSIPVFGMHLYTW 60 I + LF L G K ++ +++++ + + H L G+ + + G+H W Sbjct: 51 ISVAALFVLRYGFKPKYLAMILIITAVGLWESFYHLGNHALEDVGQGFGVAILGLHTQFW 110 Query: 61 SLIFSLVIILFISVLMLFDT--AEIKVAKSPVRE------IAIYLFVFLIFANFISTILE 112 + + ++ + V++ F E + R+ +A ++F +I +N + + Sbjct: 111 AEVVFWAVVFLLGVILFFAPNLKEFEDEAYKFRKLTSANIVAFWVFFIVIVSNIVQAFIS 170 Query: 113 CG--LTQCFDNPTFYQL 127 G +P Y+ Sbjct: 171 TGPPPFLGQGDPVRYRW 187 >gi|118475681|ref|YP_892774.1| DsbB family disulfide bond formation protein [Campylobacter fetus subsp. fetus 82-40] gi|118414907|gb|ABK83327.1| disulfide bond formation protein, DsbB family [Campylobacter fetus subsp. fetus 82-40] Length = 499 Score = 112 bits (281), Expect = 1e-23, Method: Composition-based stats. Identities = 23/137 (16%), Positives = 54/137 (39%), Gaps = 11/137 (8%) Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDL-GYSIPVFGMHLYTW 60 I + LF L G K ++ +++++ + + H L G+ + + G+H W Sbjct: 52 ISVAALFVLRYGFKPKYLAMILIITAVGLWESFYHLGNHALEDVGQGFGVAILGLHTQFW 111 Query: 61 SLIFSLVIILFISVLMLFDT--AEIKVAKSPVRE------IAIYLFVFLIFANFISTILE 112 + + ++ + V++ F E + R+ +A ++F +I +N + + Sbjct: 112 AEVVFWAVVFLLGVILFFAPNLKEFEDEAYKFRKLTSANIVAFWVFFIVIVSNIVQAFIS 171 Query: 113 CG--LTQCFDNPTFYQL 127 G +P Y Sbjct: 172 TGPPPFLGQGDPVRYSW 188 >gi|149178805|ref|ZP_01857386.1| hypothetical protein PM8797T_06467 [Planctomyces maris DSM 8797] gi|148842346|gb|EDL56728.1| hypothetical protein PM8797T_06467 [Planctomyces maris DSM 8797] Length = 196 Score = 112 bits (280), Expect = 2e-23, Method: Composition-based stats. Identities = 39/114 (34%), Positives = 63/114 (55%), Gaps = 4/114 (3%) Query: 19 YSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSLIFSLVIILFISVLMLF 78 Y + IL A+ I+TRQ+LIHI+P D GY PV G+HLYTW+L+ LV+++ + ++F Sbjct: 74 YGMSILAAVCGACISTRQILIHIVPPDPGYGDPVLGLHLYTWALVVFLVVLIDSGLNLMF 133 Query: 79 DTA---EIKVAKSPVREIAIYLFVFLIFANFISTILECGLTQC-FDNPTFYQLL 128 + + + V + I + +I AN +S + G D+P Y+L Sbjct: 134 VPELVTDHPIEFNWVSKAVIGILGAVIIANLLSVFCQEGFHWVLPDDPVRYELF 187 >gi|87306912|ref|ZP_01089058.1| conserved membrane protein [Blastopirellula marina DSM 3645] gi|87290285|gb|EAQ82173.1| conserved membrane protein [Blastopirellula marina DSM 3645] Length = 196 Score = 111 bits (278), Expect = 3e-23, Method: Composition-based stats. Identities = 40/114 (35%), Positives = 64/114 (56%), Gaps = 4/114 (3%) Query: 19 YSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSLIFSLVIILFISVLMLF 78 Y + IL A+ I+TRQ+L+HI+P D GY PVFG+HLYTW+L+ +V+++ + ++F Sbjct: 74 YGMSILAAVCGAAISTRQILLHIVPPDPGYGDPVFGLHLYTWALVVFVVVLIDSGLNLMF 133 Query: 79 DTA---EIKVAKSPVREIAIYLFVFLIFANFISTILECGLTQC-FDNPTFYQLL 128 + + V V + I LF +I AN + + G D+P Y+L Sbjct: 134 AGSLVTDQPVKFGSVSKGVIGLFGAVIVANLLCVFCQAGFHWILPDDPARYELF 187 >gi|217032036|ref|ZP_03437537.1| hypothetical protein HPB128_187g63 [Helicobacter pylori B128] gi|298736288|ref|YP_003728814.1| hypothetical protein HPB8_793 [Helicobacter pylori B8] gi|216946346|gb|EEC24952.1| hypothetical protein HPB128_187g63 [Helicobacter pylori B128] gi|298355478|emb|CBI66350.1| conserved hypothetical protein [Helicobacter pylori B8] Length = 490 Score = 111 bits (277), Expect = 5e-23, Method: Composition-based stats. Identities = 23/133 (17%), Positives = 55/133 (41%), Gaps = 6/133 (4%) Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDL-GYSIPVFGMHLYT 59 +IG L + G K ++ ++++L A + + H L G+++ + G+H Sbjct: 51 LIGAVALLVVRFGFKPKYIALLLLMASSGLYESFYHTGSHALEDVGQGFALAILGLHTQF 110 Query: 60 WSLIFSLVIILFISVLMLFDTAEIKVA---KSPVREIAIYLFVFLIFANFISTILECGLT 116 W+L ++ ++VL+ F + +++ A Y+F ++ +N + G Sbjct: 111 WALFVFFSVVALLAVLLFFAPNTQPFKVRLLNTLQKSAFYVFFIVVGSNAVQAFFSTGPF 170 Query: 117 QCFD--NPTFYQL 127 +P + Sbjct: 171 PYIGQSDPVRFSW 183 >gi|255323029|ref|ZP_05364165.1| disulfide bond formation protein, DsbB family [Campylobacter showae RM3277] gi|255299891|gb|EET79172.1| disulfide bond formation protein, DsbB family [Campylobacter showae RM3277] Length = 515 Score = 109 bits (274), Expect = 9e-23, Method: Composition-based stats. Identities = 28/141 (19%), Positives = 58/141 (41%), Gaps = 14/141 (9%) Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDL-GYSIPVFGMHLYT 59 ++G+ + L G+K R+ + ++ GA + RQ + G+ +FG H YT Sbjct: 53 VVGVAGILILRYGLKARYIAAVLFGAAYGIFMTLRQASFSLYRDVGMGFGGDIFGAHTYT 112 Query: 60 WSLIFSLVIILFISVLMLFDT-----------AEIKVAKSPVREIAIYLFVFLIFANFIS 108 W ++ V+++ + ++MLF + + I L +F+I +N + Sbjct: 113 WGILVYWVVVVAMGLMMLFAKDKVVSGDIARSDTRIKPLNAYSKFVIALSLFVILSNAVQ 172 Query: 109 TILECG--LTQCFDNPTFYQL 127 ++ G +P L Sbjct: 173 ALISAGIPPYSGKGDPERISL 193 >gi|282891246|ref|ZP_06299748.1| hypothetical protein pah_c050o008 [Parachlamydia acanthamoebae str. Hall's coccus] gi|281498743|gb|EFB41060.1| hypothetical protein pah_c050o008 [Parachlamydia acanthamoebae str. Hall's coccus] Length = 169 Score = 109 bits (274), Expect = 1e-22, Method: Composition-based stats. Identities = 34/121 (28%), Positives = 63/121 (52%), Gaps = 4/121 (3%) Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWS 61 + G L NL G++ HY++ +L + +A RQ+ +H+ PG + +PV G+ LYTWS Sbjct: 48 VAAGLLLNLFFGVRMSHYALSLLSCLFGGFVALRQISLHVCPGFSTFGLPVLGLSLYTWS 107 Query: 62 LIFSLVIILFISVLMLFDTAEI----KVAKSPVREIAIYLFVFLIFANFISTILECGLTQ 117 I + IS+++ + + + ++A+ L + + AN ++T L+CG Sbjct: 108 FIVFACAVCAISLILFLYRPDKSEQVPLNQEWFSKLALGLTLAISLANILTTYLQCGWGV 167 Query: 118 C 118 C Sbjct: 168 C 168 >gi|118497951|ref|YP_899001.1| DsbB family disulfide bond formation protein [Francisella tularensis subsp. novicida U112] gi|134301548|ref|YP_001121516.1| hypothetical protein FTW_0477 [Francisella tularensis subsp. tularensis WY96-3418] gi|187931395|ref|YP_001891379.1| disulfide bond formation protein, DsbB family [Francisella tularensis subsp. mediasiatica FSC147] gi|194323173|ref|ZP_03056957.1| conserved hypothetical protein [Francisella tularensis subsp. novicida FTE] gi|208779641|ref|ZP_03246986.1| conserved hypothetical protein [Francisella novicida FTG] gi|224457609|ref|ZP_03666082.1| hypothetical protein FtultM_08199 [Francisella tularensis subsp. tularensis MA00-2987] gi|254373304|ref|ZP_04988792.1| disulfide bond formation protein [Francisella tularensis subsp. novicida GA99-3549] gi|254374767|ref|ZP_04990248.1| disulfide bond formation protein [Francisella novicida GA99-3548] gi|46254985|gb|AAP97855.2| 20 kDa putative exported protein [Francisella tularensis] gi|118423857|gb|ABK90247.1| disulfide bond formation protein, DsbB family [Francisella novicida U112] gi|134049325|gb|ABO46396.1| putative disulfide bond formation protein [Francisella tularensis subsp. tularensis WY96-3418] gi|151571030|gb|EDN36684.1| disulfide bond formation protein [Francisella novicida GA99-3549] gi|151572486|gb|EDN38140.1| disulfide bond formation protein [Francisella novicida GA99-3548] gi|187712304|gb|ACD30601.1| disulfide bond formation protein, DsbB family [Francisella tularensis subsp. mediasiatica FSC147] gi|194322537|gb|EDX20017.1| conserved hypothetical protein [Francisella tularensis subsp. novicida FTE] gi|208744602|gb|EDZ90901.1| conserved hypothetical protein [Francisella novicida FTG] gi|282159653|gb|ADA79044.1| hypothetical protein NE061598_07835 [Francisella tularensis subsp. tularensis NE061598] Length = 178 Score = 109 bits (274), Expect = 1e-22, Method: Composition-based stats. Identities = 40/119 (33%), Positives = 66/119 (55%), Gaps = 1/119 (0%) Query: 12 SGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSLIFSLVIILF 71 G +HY ++IL A+ +A Q+L+HI+PG Y VF +H+YTW+ I S++ IL+ Sbjct: 59 HGNNYKHYLLIILVALLNAAMAITQILLHIVPGTGNYGEAVFSLHMYTWNFIVSIIFILY 118 Query: 72 ISVL-MLFDTAEIKVAKSPVREIAIYLFVFLIFANFISTILECGLTQCFDNPTFYQLLN 129 ++ ++ K S + ++AI L + L AN ++ +ECG C +P Y L N Sbjct: 119 AAICGLITPNENKKKKLSILAKLAIILILILTVANTLNVFVECGPHLCPSDPNSYWLFN 177 >gi|56708458|ref|YP_170354.1| hypothetical protein FTT_1410 [Francisella tularensis subsp. tularensis SCHU S4] gi|110670929|ref|YP_667486.1| hypothetical protein FTF1410 [Francisella tularensis subsp. tularensis FSC198] gi|254371082|ref|ZP_04987084.1| conserved hypothetical protein [Francisella tularensis subsp. tularensis FSC033] gi|254875302|ref|ZP_05248012.1| conserved hypothetical protein [Francisella tularensis subsp. tularensis MA00-2987] gi|56604950|emb|CAG46043.1| conserved hypothetical membrane protein [Francisella tularensis subsp. tularensis SCHU S4] gi|110321262|emb|CAL09426.1| conserved hypothetical membrane protein [Francisella tularensis subsp. tularensis FSC198] gi|151569322|gb|EDN34976.1| conserved hypothetical protein [Francisella tularensis subsp. tularensis FSC033] gi|254841301|gb|EET19737.1| conserved hypothetical protein [Francisella tularensis subsp. tularensis MA00-2987] Length = 181 Score = 109 bits (274), Expect = 1e-22, Method: Composition-based stats. Identities = 40/119 (33%), Positives = 66/119 (55%), Gaps = 1/119 (0%) Query: 12 SGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSLIFSLVIILF 71 G +HY ++IL A+ +A Q+L+HI+PG Y VF +H+YTW+ I S++ IL+ Sbjct: 62 HGNNYKHYLLIILVALLNAAMAITQILLHIVPGTGNYGEAVFSLHMYTWNFIVSIIFILY 121 Query: 72 ISVL-MLFDTAEIKVAKSPVREIAIYLFVFLIFANFISTILECGLTQCFDNPTFYQLLN 129 ++ ++ K S + ++AI L + L AN ++ +ECG C +P Y L N Sbjct: 122 AAICGLITPNENKKKKLSILAKLAIILILILTVANTLNVFVECGPHLCPSDPNSYWLFN 180 >gi|222824494|ref|YP_002576068.1| disulfide bond formation protein, DsbB family [Campylobacter lari RM2100] gi|222539715|gb|ACM64816.1| disulfide bond formation protein, DsbB family [Campylobacter lari RM2100] Length = 505 Score = 109 bits (273), Expect = 1e-22, Method: Composition-based stats. Identities = 26/139 (18%), Positives = 54/139 (38%), Gaps = 13/139 (9%) Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPG-DLGYSIPVFGMHLYTW 60 IG+ LF + G+K + + +++ + + H D G+ +P+FG+H Y W Sbjct: 55 IGVAALFVVRYGMKGKFLAFLLIATAFGLWQSFNHISGHAHRDLDQGFGLPIFGLHTYFW 114 Query: 61 SLIFSLVIILFISVLMLFDTAEIKVAK----------SPVREIAIYLFVFLIFANFISTI 110 + + ++L + V+ F K S A+ + F++ +N Sbjct: 115 AEVVFWAVVLLLGVIFAFAPKFGSFEKEMEGASFRKLSKFNLAAMVIVAFIVASNVFQAF 174 Query: 111 LECG--LTQCFDNPTFYQL 127 + G +P + L Sbjct: 175 VSTGPIPYSGQGDPVRFSL 193 >gi|213420991|ref|ZP_03354057.1| hypothetical protein Salmonentericaenterica_25887 [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 136 Score = 109 bits (273), Expect = 1e-22, Method: Composition-based stats. Identities = 47/116 (40%), Positives = 75/116 (64%), Gaps = 4/116 (3%) Query: 18 HYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSLIFSLVIILFISVLML 77 HY ++I+G+I T ++A+RQ+ +HI+PGD GY FG+H YTW+LI S++II+ ++V++ Sbjct: 2 HYGMVIIGSILTGVMASRQICLHIMPGDTGYGSAFFGLHFYTWTLITSILIIIAVAVVLA 61 Query: 78 FDTAEIKVA----KSPVREIAIYLFVFLIFANFISTILECGLTQCFDNPTFYQLLN 129 + + I ++F+ LI AN IST+LECG +C NP Y+LL+ Sbjct: 62 ISSMNAAFRSLNINPNLFSIVGWVFLLLITANLISTVLECGGGECAANPVTYKLLS 117 >gi|254368867|ref|ZP_04984880.1| conserved hypothetical protein [Francisella tularensis subsp. holarctica FSC022] gi|157121788|gb|EDO65958.1| conserved hypothetical protein [Francisella tularensis subsp. holarctica FSC022] Length = 181 Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats. Identities = 40/119 (33%), Positives = 66/119 (55%), Gaps = 1/119 (0%) Query: 12 SGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSLIFSLVIILF 71 G +HY ++IL A+ +A Q+L+HI+PG Y VF +H+YTW+ I S++ IL+ Sbjct: 62 HGNNYKHYLLIILVALLNAAMAITQILLHIVPGTGNYGEAVFSLHMYTWNFIVSIIFILY 121 Query: 72 ISVL-MLFDTAEIKVAKSPVREIAIYLFVFLIFANFISTILECGLTQCFDNPTFYQLLN 129 ++ ++ K S + ++AI L + L AN ++ +ECG C +P Y L N Sbjct: 122 AAICGLITPNENKKKKLSILAKLAIILILILTVANTLNVFVECGPHLCPSDPNSYWLFN 180 >gi|89256043|ref|YP_513405.1| hypothetical protein FTL_0652 [Francisella tularensis subsp. holarctica LVS] gi|156502055|ref|YP_001428120.1| hypothetical protein FTA_0688 [Francisella tularensis subsp. holarctica FTNF002-00] gi|167010201|ref|ZP_02275132.1| hypothetical protein Ftulh_05650 [Francisella tularensis subsp. holarctica FSC200] gi|254367383|ref|ZP_04983409.1| hypothetical protein FTHG_00611 [Francisella tularensis subsp. holarctica 257] gi|290954244|ref|ZP_06558865.1| hypothetical protein FtulhU_08389 [Francisella tularensis subsp. holarctica URFT1] gi|295312364|ref|ZP_06803149.1| hypothetical protein FtulhU_08376 [Francisella tularensis subsp. holarctica URFT1] gi|89143874|emb|CAJ79092.1| conserved hypothetical membrane protein [Francisella tularensis subsp. holarctica LVS] gi|134253199|gb|EBA52293.1| hypothetical protein FTHG_00611 [Francisella tularensis subsp. holarctica 257] gi|156252658|gb|ABU61164.1| putative disulfide bond formation protein [Francisella tularensis subsp. holarctica FTNF002-00] Length = 178 Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats. Identities = 40/119 (33%), Positives = 66/119 (55%), Gaps = 1/119 (0%) Query: 12 SGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSLIFSLVIILF 71 G +HY ++IL A+ +A Q+L+HI+PG Y VF +H+YTW+ I S++ IL+ Sbjct: 59 HGNNYKHYLLIILVALLNAAMAITQILLHIVPGTGNYGEAVFSLHMYTWNFIVSIIFILY 118 Query: 72 ISVL-MLFDTAEIKVAKSPVREIAIYLFVFLIFANFISTILECGLTQCFDNPTFYQLLN 129 ++ ++ K S + ++AI L + L AN ++ +ECG C +P Y L N Sbjct: 119 AAICGLITPNENKKKKLSILAKLAIILILILTVANTLNVFVECGPHLCPSDPNSYWLFN 177 >gi|242310377|ref|ZP_04809532.1| disulfide bond formation protein [Helicobacter pullorum MIT 98-5489] gi|239522775|gb|EEQ62641.1| disulfide bond formation protein [Helicobacter pullorum MIT 98-5489] Length = 505 Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats. Identities = 25/139 (17%), Positives = 56/139 (40%), Gaps = 13/139 (9%) Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPG-DLGYSIPVFGMHLYTW 60 IG+ LF + G+K ++ + +++ A + Q +H + D G+ + VFG+H Y W Sbjct: 55 IGVMALFIVRYGMKGKYIAAILIMAAFGLYQSFAQYGMHAMRDLDQGFGLAVFGLHTYFW 114 Query: 61 SLIFSLVIILFISVLMLFDTAEIKVAKSPVRE----------IAIYLFVFLIFANFISTI 110 + + ++L + V+ F + + ++ + +I +N Sbjct: 115 AEVVFWAVVLLLGVIFAFAPKFGEFDVEMAGKKFREWTKLSFASVVIVTLIIASNVFQAF 174 Query: 111 LECG--LTQCFDNPTFYQL 127 + G +P + L Sbjct: 175 VSTGIPPYAGQGDPVRFSL 193 >gi|15611609|ref|NP_223260.1| hypothetical protein jhp0542 [Helicobacter pylori J99] gi|4155079|gb|AAD06114.1| putative [Helicobacter pylori J99] Length = 490 Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats. Identities = 23/133 (17%), Positives = 56/133 (42%), Gaps = 6/133 (4%) Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDL-GYSIPVFGMHLYT 59 +IG L + G K ++ ++++L A + + H L G+++ + G+H Sbjct: 51 LIGAVALLVVRFGFKPKYIALLLLMASSGLYESFYHTGSHALEDVGQGFALAILGLHTQF 110 Query: 60 WSLIFSLVIILFISVLMLFDTAEIKVA---KSPVREIAIYLFVFLIFANFISTILECGLT 116 W+L ++ ++VL+ F + +++ A Y+F ++ +N + + G Sbjct: 111 WALFVFFSVVALLAVLLFFAPNAQPFKDRLLNTLQKSAFYVFFIVVGSNAVQAFVSTGPF 170 Query: 117 QCFD--NPTFYQL 127 +P + Sbjct: 171 PYIGQSDPVRFSW 183 >gi|208434515|ref|YP_002266181.1| DsbB-like protein [Helicobacter pylori G27] gi|208432444|gb|ACI27315.1| DsbB-like protein [Helicobacter pylori G27] Length = 490 Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats. Identities = 23/133 (17%), Positives = 56/133 (42%), Gaps = 6/133 (4%) Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDL-GYSIPVFGMHLYT 59 +IG L + G K ++ ++++L A + + H L G+++ + G+H Sbjct: 51 LIGAVALLVVRFGFKPKYIALLLLMASSGLYESFYHTGSHALEDVGQGFALAILGLHTQF 110 Query: 60 WSLIFSLVIILFISVLMLFDTAEI---KVAKSPVREIAIYLFVFLIFANFISTILECGLT 116 W+L ++ ++VL+ F + +++ A Y+F ++ +N + + G Sbjct: 111 WALFVFFSVVALLAVLLFFAPNTQLSKDYPLNALQKSAFYVFFMVVGSNAVQAFISTGPF 170 Query: 117 QCFD--NPTFYQL 127 +P + Sbjct: 171 PYIGQSDPVRFSW 183 >gi|307637283|gb|ADN79733.1| putative ATP/GTP binding protein [Helicobacter pylori 908] gi|325995873|gb|ADZ51278.1| putative ATP /GTP binding protein [Helicobacter pylori 2018] gi|325997468|gb|ADZ49676.1| hypothetical protein hp2017_0582 [Helicobacter pylori 2017] Length = 490 Score = 108 bits (270), Expect = 3e-22, Method: Composition-based stats. Identities = 25/133 (18%), Positives = 56/133 (42%), Gaps = 6/133 (4%) Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDL-GYSIPVFGMHLYT 59 +IG L + G K ++ ++++L A + + H L G+++ + G+H Sbjct: 51 LIGAVALLVVRFGFKPKYIALLLLMASSGLYESFYHTGSHALEDVGQGFALAILGLHTQF 110 Query: 60 WSLIFSLVIILFISVLMLFDTAEIKVA---KSPVREIAIYLFVFLIFANFISTILECGLT 116 W+L +I ++VL+ F + +++ A Y+F ++ +N I + G Sbjct: 111 WALFVFFSVITLLAVLLFFAPNAQPFKDRLLNTLQKSAFYVFFMVVGSNAIQAFVSTGPF 170 Query: 117 QCFD--NPTFYQL 127 +P + Sbjct: 171 PYIGQSDPVRFSW 183 >gi|223039067|ref|ZP_03609358.1| disulfide bond formation protein, DsbB family [Campylobacter rectus RM3267] gi|222879706|gb|EEF14796.1| disulfide bond formation protein, DsbB family [Campylobacter rectus RM3267] Length = 515 Score = 108 bits (270), Expect = 3e-22, Method: Composition-based stats. Identities = 27/141 (19%), Positives = 56/141 (39%), Gaps = 14/141 (9%) Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDL-GYSIPVFGMHLYT 59 ++G+ + L G+K R+ ++ GA + R + G+ +FG H YT Sbjct: 53 VVGVAGILILRYGLKARYIVAVLFGAAYGIFMTLRHASFSLYRDVGMGFGGDIFGAHTYT 112 Query: 60 WSLIFSLVIILFISVLMLFDT-----------AEIKVAKSPVREIAIYLFVFLIFANFIS 108 W ++ V+++ + ++MLF + + I L +F+I +N + Sbjct: 113 WGILVYWVVVVAMGLMMLFAKDKVVSNDIARADTRVKPLNAYSKFVIALSLFVILSNAVQ 172 Query: 109 TILECG--LTQCFDNPTFYQL 127 ++ G +P L Sbjct: 173 ALISSGIPPYSGKGDPERISL 193 >gi|317009389|gb|ADU79969.1| dsbb-like protein [Helicobacter pylori India7] Length = 490 Score = 107 bits (269), Expect = 4e-22, Method: Composition-based stats. Identities = 23/133 (17%), Positives = 56/133 (42%), Gaps = 6/133 (4%) Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDL-GYSIPVFGMHLYT 59 +IG L + G K ++ ++++L A + + H L G+++ + G+H Sbjct: 51 LIGAVALLVVRFGFKPKYIALLLLMASSGLYESFYHTGSHALEDVGQGFALAILGLHTQF 110 Query: 60 WSLIFSLVIILFISVLMLFDTAEI---KVAKSPVREIAIYLFVFLIFANFISTILECGLT 116 W+L ++ ++VL+ F + + +++ A Y+F ++ +N + G Sbjct: 111 WALFVFFSVVALLAVLLFFAPNTQLFKDRSLNALQKSAFYIFFMVVGSNAVQAFFSTGPF 170 Query: 117 QCFD--NPTFYQL 127 +P + Sbjct: 171 PYIGQSDPVRFSW 183 >gi|224418545|ref|ZP_03656551.1| disulfide bond formation protein, DsbB family [Helicobacter canadensis MIT 98-5491] gi|253826902|ref|ZP_04869787.1| disulfide bond formation protein, DsbB family [Helicobacter canadensis MIT 98-5491] gi|313142073|ref|ZP_07804266.1| conserved hypothetical protein [Helicobacter canadensis MIT 98-5491] gi|253510308|gb|EES88967.1| disulfide bond formation protein, DsbB family [Helicobacter canadensis MIT 98-5491] gi|313131104|gb|EFR48721.1| conserved hypothetical protein [Helicobacter canadensis MIT 98-5491] Length = 505 Score = 107 bits (269), Expect = 4e-22, Method: Composition-based stats. Identities = 26/139 (18%), Positives = 55/139 (39%), Gaps = 13/139 (9%) Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPG-DLGYSIPVFGMHLYTW 60 IG+ LF + G K ++ + +++ A + Q +H + D G+ + VFG+H Y W Sbjct: 55 IGVMALFIVRYGFKGKYVAAILVMAAFGLYQSFAQYGMHAMRDLDQGFGLAVFGLHTYFW 114 Query: 61 SLIFSLVIILFISVLMLFDTAEIKVAKSPVRE----------IAIYLFVFLIFANFISTI 110 + I ++L + V+ F + + ++ + +I +N Sbjct: 115 AEIVFWAVVLLLGVIFAFAPKFSEFEVEMAGKKVREWTKLSFASVVVVTLIIASNVFQAF 174 Query: 111 LECG--LTQCFDNPTFYQL 127 + G +P + L Sbjct: 175 VSTGVPPYAGQGDPVRFSL 193 >gi|317012409|gb|ADU83017.1| dsbb-like protein [Helicobacter pylori Lithuania75] Length = 490 Score = 107 bits (268), Expect = 4e-22, Method: Composition-based stats. Identities = 23/133 (17%), Positives = 56/133 (42%), Gaps = 6/133 (4%) Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDL-GYSIPVFGMHLYT 59 +IG L + G K ++ ++++L A + + H L G+++ + G+H Sbjct: 51 LIGAVALLVVRFGFKPKYIALLLLMASSGLYESFYHTGSHALEDVGQGFALAILGLHTQF 110 Query: 60 WSLIFSLVIILFISVLMLFDTAEI---KVAKSPVREIAIYLFVFLIFANFISTILECGLT 116 W+L + + ++VL+ F + + +++ A Y+F ++ +N + G Sbjct: 111 WALFVFFSVAVLLAVLLFFAPNTQLFKDDSLNALQKSAFYVFFMVVGSNAVQAFFSTGPF 170 Query: 117 QCFD--NPTFYQL 127 +P + Sbjct: 171 PYIGQSDPVRFSW 183 >gi|109947915|ref|YP_665143.1| hypothetical protein Hac_1414 [Helicobacter acinonychis str. Sheeba] gi|109715136|emb|CAK00144.1| conserved hypothetical protein [Helicobacter acinonychis str. Sheeba] Length = 490 Score = 107 bits (268), Expect = 5e-22, Method: Composition-based stats. Identities = 22/133 (16%), Positives = 56/133 (42%), Gaps = 6/133 (4%) Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDL-GYSIPVFGMHLYT 59 +IG L + G K ++ ++++L A + + H L G+++ + G+H Sbjct: 51 LIGAVALLVVRFGFKPKYIALLLLMASSGLYESFYHTGSHALEDVGQGFALAILGLHTQF 110 Query: 60 WSLIFSLVIILFISVLMLFDTAEIKVA---KSPVREIAIYLFVFLIFANFISTILECGLT 116 W+L +++ +++L+ F + +++ A Y+F ++ +N + G Sbjct: 111 WALFVFFSVVVSLALLLFFSPNIHNFKDRSLNMLQKSAFYIFFIVVGSNAMQAFFSTGPF 170 Query: 117 QCFD--NPTFYQL 127 +P + Sbjct: 171 PYIGQSDPVRFSW 183 >gi|332678668|gb|AEE87797.1| Putative inner membrane protein [Francisella cf. novicida Fx1] Length = 178 Score = 106 bits (266), Expect = 9e-22, Method: Composition-based stats. Identities = 40/119 (33%), Positives = 66/119 (55%), Gaps = 1/119 (0%) Query: 12 SGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSLIFSLVIILF 71 G +HY ++IL A+ +A Q+L+HI+PG Y VF +H+YTW+ I S++ IL+ Sbjct: 59 HGNNYKHYLLIILVALLNAAMAITQILLHIVPGTGNYGEAVFSLHMYTWNFIVSIIFILY 118 Query: 72 ISVL-MLFDTAEIKVAKSPVREIAIYLFVFLIFANFISTILECGLTQCFDNPTFYQLLN 129 ++ ++ K S + ++AI L + L AN ++ +ECG C +P Y L N Sbjct: 119 AAICGLITPNENKKKKLSILAKLAIILILILTVANTLNVFVECGPHLCLSDPNSYWLFN 177 >gi|154174738|ref|YP_001408864.1| DsbB family disulfide bond formation protein [Campylobacter curvus 525.92] gi|112803685|gb|EAU01029.1| disulfide bond formation protein, DsbB family [Campylobacter curvus 525.92] Length = 504 Score = 106 bits (264), Expect = 1e-21, Method: Composition-based stats. Identities = 27/139 (19%), Positives = 54/139 (38%), Gaps = 13/139 (9%) Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPG-DLGYSIPVFGMHLYTW 60 IG+ LF + G+K R+ +++++ A + IH + D G+ + VFG+H Y W Sbjct: 55 IGVMALFIVRYGMKARYLAMILIMAGFGLWQSFAHYGIHAMRDLDQGFGLAVFGIHTYFW 114 Query: 61 SLIFSLVIILFISVLMLFDTAEIKVAKS----------PVREIAIYLFVFLIFANFISTI 110 + + ++L + V+ F + A + +I +N Sbjct: 115 AEVVFWAVVLLLGVIFFFAPKFSAFDEELDGEKFRRFTKASLCAFVIATLIIASNVFQAF 174 Query: 111 LECG--LTQCFDNPTFYQL 127 + G +P + L Sbjct: 175 VSTGVPPYYGQGDPVRFTL 193 >gi|283956195|ref|ZP_06373680.1| putative ATP/GTP binding protein [Campylobacter jejuni subsp. jejuni 1336] gi|283792349|gb|EFC31133.1| putative ATP/GTP binding protein [Campylobacter jejuni subsp. jejuni 1336] Length = 508 Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats. Identities = 23/139 (16%), Positives = 50/139 (35%), Gaps = 13/139 (9%) Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPG-DLGYSIPVFGMHLYTW 60 IG+ LF + G+K ++ + +++ + H D G+ + VFG+H Y W Sbjct: 55 IGVMALFIVRYGMKGKYLAALLIMTAVGLYQSFAHYGNHAHRDLDQGFGLAVFGIHTYFW 114 Query: 61 SLIFSLVIILFISVLMLFDTAEIKVAKS----------PVREIAIYLFVFLIFANFISTI 110 + + ++L + V+ F A+ + ++ +N Sbjct: 115 AEVVFWAVVLLLGVIFAFAPKFNAFEAELNGEKFRKYTKFSLAAVVISAIVVASNVFQAF 174 Query: 111 LECG--LTQCFDNPTFYQL 127 + G +P + L Sbjct: 175 VSTGIPPYVGQGDPVRFSL 193 >gi|159038828|ref|YP_001538081.1| hypothetical protein Sare_3287 [Salinispora arenicola CNS-205] gi|157917663|gb|ABV99090.1| conserved hypothetical protein [Salinispora arenicola CNS-205] Length = 197 Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats. Identities = 35/114 (30%), Positives = 61/114 (53%), Gaps = 3/114 (2%) Query: 19 YSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSLIFSLVIILFISVLMLF 78 Y + I+ A+ A RQ+L+HI+P D GY PV G+H YTW+ I V+++F V ++F Sbjct: 74 YGLSIVAAVAGAAYAARQILLHIVPPDPGYGSPVLGLHPYTWAFITFCVVLVFCGVSLVF 133 Query: 79 DTA--EIKVAKSPVREIAIYLFVFLIFANFISTILECGLTQC-FDNPTFYQLLN 129 V ++ I LF+ ++ AN ++ ++ G +PT Y++ + Sbjct: 134 GRELVPRGVRFGWPSKVVIGLFLVIVAANLVAVFVQEGFHWFLPADPTRYEIFD 187 >gi|332184486|gb|AEE26740.1| Putative inner membrane protein [Francisella cf. novicida 3523] Length = 178 Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats. Identities = 38/119 (31%), Positives = 66/119 (55%), Gaps = 1/119 (0%) Query: 12 SGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSLIFSLVIILF 71 G +HY ++IL A+ +A Q+L+HI+PG Y VF +H+YTW+ I S++ IL+ Sbjct: 59 HGNNYKHYLLIILVALLNAAMAITQILLHIVPGTGNYGEAVFSLHMYTWNFIVSIIFILY 118 Query: 72 ISVL-MLFDTAEIKVAKSPVREIAIYLFVFLIFANFISTILECGLTQCFDNPTFYQLLN 129 ++ ++ K + + ++AI L + L AN ++ +ECG C +P Y L + Sbjct: 119 AAICGLITPNENKKKKLNILAKLAIILILILTLANTLNVFVECGPHLCPSDPNSYWLFS 177 >gi|305432553|ref|ZP_07401714.1| DsbB family disulfide bond formation protein [Campylobacter coli JV20] gi|5921219|emb|CAB56502.1| putative membrane protein CjaE [Campylobacter jejuni] gi|304444264|gb|EFM36916.1| DsbB family disulfide bond formation protein [Campylobacter coli JV20] Length = 505 Score = 105 bits (262), Expect = 2e-21, Method: Composition-based stats. Identities = 24/139 (17%), Positives = 51/139 (36%), Gaps = 13/139 (9%) Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPG-DLGYSIPVFGMHLYTW 60 IG+ LF + G+K ++ + +++ + H D G+ + VFG+H Y W Sbjct: 55 IGVIALFIVRYGMKGKYLAALLIMTAVGLYQSFAHYGNHAHRDLDQGFGLAVFGIHTYFW 114 Query: 61 SLIFSLVIILFISVLMLFDTAEIKVAKS----------PVREIAIYLFVFLIFANFISTI 110 + + ++L + V+ F K A+ + ++ +N Sbjct: 115 AEVVFWAVVLLLGVMFAFAPKFGSFDKELNGEKFRKFTKFSFAAVLISTLIVASNVFQAF 174 Query: 111 LECG--LTQCFDNPTFYQL 127 + G +P + L Sbjct: 175 VSTGIPPYVGQGDPVRFSL 193 >gi|313836796|gb|EFS74510.1| conserved hypothetical protein [Propionibacterium acnes HL037PA2] gi|314929796|gb|EFS93627.1| conserved hypothetical protein [Propionibacterium acnes HL044PA1] gi|314972225|gb|EFT16322.1| conserved hypothetical protein [Propionibacterium acnes HL037PA3] Length = 218 Score = 105 bits (262), Expect = 2e-21, Method: Composition-based stats. Identities = 33/112 (29%), Positives = 53/112 (47%), Gaps = 3/112 (2%) Query: 19 YSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSLIFSLVIILFISVLMLF 78 Y + IL AI + R +L+HI PGD GY G+ YTW+ I +++I F V+M F Sbjct: 100 YGVSILSAILGGAESARHILLHIQPGDPGYGSKALGLSTYTWAFITFVIVIAFCGVMMTF 159 Query: 79 DT--AEIKVAKSPVREIAIYLFVFLIFANFISTILECGLT-QCFDNPTFYQL 127 V + + ++LF ++ AN + + G +P Y+L Sbjct: 160 APWLTPRGVKTHALSAVIMWLFALIVVANLVMIVFLEGFHVLLPGDPACYEL 211 >gi|57169011|ref|ZP_00368139.1| probable ATP /GTP binding protein Cj0017c [Campylobacter coli RM2228] gi|57019556|gb|EAL56246.1| probable ATP /GTP binding protein Cj0017c [Campylobacter coli RM2228] Length = 505 Score = 105 bits (262), Expect = 3e-21, Method: Composition-based stats. Identities = 24/139 (17%), Positives = 51/139 (36%), Gaps = 13/139 (9%) Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPG-DLGYSIPVFGMHLYTW 60 IG+ LF + G+K ++ + +++ + H D G+ + VFG+H Y W Sbjct: 55 IGVIALFIVRYGMKGKYLAALLIMTAVGLYQSFAHYGNHAHRDLDQGFGLAVFGIHTYFW 114 Query: 61 SLIFSLVIILFISVLMLFDTAEIKVAKS----------PVREIAIYLFVFLIFANFISTI 110 + + ++L + V+ F K A+ + ++ +N Sbjct: 115 AEVVFWAVVLLLGVMFAFAPKFGSFDKELNGEKFRKFTKFSFAAVLISTLIVASNVFQAF 174 Query: 111 LECG--LTQCFDNPTFYQL 127 + G +P + L Sbjct: 175 VSTGIPPYVGQGDPVRFSL 193 >gi|261867547|ref|YP_003255469.1| DsbB family disulfide bond formation protein [Aggregatibacter actinomycetemcomitans D11S-1] gi|261412879|gb|ACX82250.1| DsbB family disulfide bond formation protein [Aggregatibacter actinomycetemcomitans D11S-1] Length = 499 Score = 104 bits (261), Expect = 3e-21, Method: Composition-based stats. Identities = 20/132 (15%), Positives = 46/132 (34%), Gaps = 10/132 (7%) Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGD-LGYSIPVFGMHLYTW 60 + F + G K ++ +I A+ R G+ + G H Y+W Sbjct: 51 VMFTF-LIIRYGPKPKYIGWVIFIAVFGIFAGFRHSSGSFAWDIHQGWWAEILGAHTYSW 109 Query: 61 SLIFSLVIILFISVLMLFDTAEIKVAKSP------VREIAIYLFVFLIFANFISTILECG 114 ++ V+++F++++ F + + + +F+ +I N + + G Sbjct: 110 PMVIHAVVLIFVALIFCFTKDIYNFVSQSHKQLNILSKTCMAIFMIVICGNMVQAFISTG 169 Query: 115 --LTQCFDNPTF 124 NP Sbjct: 170 LPPNMGVSNPAR 181 >gi|293391425|ref|ZP_06635759.1| DsbB family disulfide bond formation protein [Aggregatibacter actinomycetemcomitans D7S-1] gi|290951959|gb|EFE02078.1| DsbB family disulfide bond formation protein [Aggregatibacter actinomycetemcomitans D7S-1] Length = 499 Score = 104 bits (261), Expect = 3e-21, Method: Composition-based stats. Identities = 20/132 (15%), Positives = 46/132 (34%), Gaps = 10/132 (7%) Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGD-LGYSIPVFGMHLYTW 60 + F + G K ++ +I A+ R G+ + G H Y+W Sbjct: 51 VMFTF-LIIRYGPKPKYIGWVIFIAVFGIFAGFRHSSGSFAWDIHQGWWAEILGAHTYSW 109 Query: 61 SLIFSLVIILFISVLMLFDTAEIKVAKSP------VREIAIYLFVFLIFANFISTILECG 114 ++ V+++F++++ F + + + +F+ +I N + + G Sbjct: 110 PMVIHAVVLIFVALIFCFTKDIYNFVSQSHKQLNILSKTCMAIFMIVICGNMVQAFISTG 169 Query: 115 --LTQCFDNPTF 124 NP Sbjct: 170 LPPNMGVSNPAR 181 >gi|163857909|ref|YP_001632207.1| hypothetical protein Bpet3596 [Bordetella petrii DSM 12804] gi|163261637|emb|CAP43939.1| putative membrane protein [Bordetella petrii] Length = 192 Score = 104 bits (261), Expect = 3e-21, Method: Composition-based stats. Identities = 32/124 (25%), Positives = 58/124 (46%), Gaps = 4/124 (3%) Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60 M G+G L N+ G HY+++I ++ + A Q+L G+ P+FG+ +++W Sbjct: 55 MAGVGLLLNIRLGPSPLHYAMVIAASLGGLVAAGNQLLAQASAGEPPSGPPLFGLSIHSW 114 Query: 61 SLIFSLVIILFISVLMLFDTAEIKVAKSP----VREIAIYLFVFLIFANFISTILECGLT 116 + + ++ F +++ D A I + LF+ I N +T LECGL Sbjct: 115 AFLAFCALLAFCVLMLAADRKWGDNALKKPVALPALIVMGLFLLAILVNVAATSLECGLG 174 Query: 117 QCFD 120 +C Sbjct: 175 ECEG 178 >gi|282854664|ref|ZP_06263999.1| conserved hypothetical protein [Propionibacterium acnes J139] gi|282582246|gb|EFB87628.1| conserved hypothetical protein [Propionibacterium acnes J139] gi|314923761|gb|EFS87592.1| conserved hypothetical protein [Propionibacterium acnes HL001PA1] gi|314966225|gb|EFT10324.1| conserved hypothetical protein [Propionibacterium acnes HL082PA2] gi|314981991|gb|EFT26084.1| conserved hypothetical protein [Propionibacterium acnes HL110PA3] gi|315090902|gb|EFT62878.1| conserved hypothetical protein [Propionibacterium acnes HL110PA4] gi|315095115|gb|EFT67091.1| conserved hypothetical protein [Propionibacterium acnes HL060PA1] gi|315104344|gb|EFT76320.1| conserved hypothetical protein [Propionibacterium acnes HL050PA2] gi|327328107|gb|EGE69876.1| hypothetical protein HMPREF9341_01159 [Propionibacterium acnes HL103PA1] Length = 216 Score = 104 bits (261), Expect = 3e-21, Method: Composition-based stats. Identities = 33/112 (29%), Positives = 53/112 (47%), Gaps = 3/112 (2%) Query: 19 YSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSLIFSLVIILFISVLMLF 78 Y + IL A+ + R +L+HI PGD GY FG+ YTW+ I ++I F V+M F Sbjct: 98 YGVSILSAVLGAAESARHILLHIQPGDPGYGSKAFGLSTYTWAFITFTIVIAFCGVMMTF 157 Query: 79 DT--AEIKVAKSPVREIAIYLFVFLIFANFISTILECGLT-QCFDNPTFYQL 127 V + + ++LF ++ AN + + G +P Y+L Sbjct: 158 APWLTPRDVKAHAISTVIMWLFALIVVANLVMIVFLEGFHFLLPGDPACYEL 209 >gi|283953650|ref|ZP_06371181.1| putative ATP/GTP binding protein [Campylobacter jejuni subsp. jejuni 414] gi|283794691|gb|EFC33429.1| putative ATP/GTP binding protein [Campylobacter jejuni subsp. jejuni 414] Length = 508 Score = 104 bits (260), Expect = 4e-21, Method: Composition-based stats. Identities = 23/139 (16%), Positives = 50/139 (35%), Gaps = 13/139 (9%) Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPG-DLGYSIPVFGMHLYTW 60 IG+ LF + G+K ++ + +++ + H D G+ + VFG+H Y W Sbjct: 55 IGVIALFIVRYGMKGKYLAALLIVTAVGLYQSFAHYGNHAHRDLDQGFGLAVFGIHTYFW 114 Query: 61 SLIFSLVIILFISVLMLFDTAEIKVAKS----------PVREIAIYLFVFLIFANFISTI 110 + + ++L + V+ F A+ + ++ +N Sbjct: 115 AEVVFWAVVLLLGVIFAFAPKFNSFEAELNGAKFRKYTKFSFAAVLISTIIVASNVFQAF 174 Query: 111 LECG--LTQCFDNPTFYQL 127 + G +P + L Sbjct: 175 VSTGVPPYLGQGDPVRFSL 193 >gi|315638055|ref|ZP_07893240.1| DsbB family disulfide bond formation protein [Campylobacter upsaliensis JV21] gi|315481903|gb|EFU72522.1| DsbB family disulfide bond formation protein [Campylobacter upsaliensis JV21] Length = 505 Score = 104 bits (259), Expect = 5e-21, Method: Composition-based stats. Identities = 24/139 (17%), Positives = 53/139 (38%), Gaps = 13/139 (9%) Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPG-DLGYSIPVFGMHLYTW 60 IG+ LF + G+K ++ + +++ + H D G+ + VFG+H Y W Sbjct: 55 IGVIALFIVRYGLKGKYLAALLIMTAFGLYQSFAHFGNHAHRDLDQGFGLAVFGIHTYFW 114 Query: 61 SLIFSLVIILFISVLMLFDTAEIKVA----------KSPVREIAIYLFVFLIFANFISTI 110 + + ++L + V+ F + +A+ + F++ +N Sbjct: 115 AEVVFWAVVLILGVIFAFAPKFSAFETEMAGEKFRQWTKFSFVAVLISTFIVASNVFQAF 174 Query: 111 LECG--LTQCFDNPTFYQL 127 + G +P + L Sbjct: 175 VSTGVPPYVGQGDPVRFSL 193 >gi|86152351|ref|ZP_01070561.1| disulfide bond formation protein, DsbB family [Campylobacter jejuni subsp. jejuni 260.94] gi|315123630|ref|YP_004065634.1| disulfide bond formation protein, DsbB family [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|85840648|gb|EAQ57900.1| disulfide bond formation protein, DsbB family [Campylobacter jejuni subsp. jejuni 260.94] gi|315017352|gb|ADT65445.1| disulfide bond formation protein, DsbB family [Campylobacter jejuni subsp. jejuni ICDCCJ07001] Length = 508 Score = 104 bits (259), Expect = 6e-21, Method: Composition-based stats. Identities = 23/139 (16%), Positives = 50/139 (35%), Gaps = 13/139 (9%) Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPG-DLGYSIPVFGMHLYTW 60 IG+ LF + G+K ++ + +++ + H D G+ + VFG+H Y W Sbjct: 55 IGVMALFIVRYGMKGKYLAALLIMTAVGLYQSFAHYGNHAHRDLDQGFGLAVFGIHTYFW 114 Query: 61 SLIFSLVIILFISVLMLFDTAEIKVAKS----------PVREIAIYLFVFLIFANFISTI 110 + + ++L + V+ F A+ + ++ +N Sbjct: 115 AEVVFWAVVLLLGVIFAFAPKFNAFEAELNGEKFRKYTKFSFAAVLISAIIVASNVFQAF 174 Query: 111 LECG--LTQCFDNPTFYQL 127 + G +P + L Sbjct: 175 VSTGIPPYVGQGDPVRFSL 193 >gi|57236929|ref|YP_178044.1| DsbB family disulfide bond formation protein [Campylobacter jejuni RM1221] gi|148926833|ref|ZP_01810512.1| putative ATP /GTP binding protein [Campylobacter jejuni subsp. jejuni CG8486] gi|205355757|ref|ZP_03222527.1| putative ATP/GTP binding protein [Campylobacter jejuni subsp. jejuni CG8421] gi|57165733|gb|AAW34512.1| disulfide bond formation protein, DsbB family [Campylobacter jejuni RM1221] gi|145844558|gb|EDK21665.1| putative ATP /GTP binding protein [Campylobacter jejuni subsp. jejuni CG8486] gi|205346534|gb|EDZ33167.1| putative ATP/GTP binding protein [Campylobacter jejuni subsp. jejuni CG8421] gi|315057458|gb|ADT71787.1| Putative ATP /GTP binding protein [Campylobacter jejuni subsp. jejuni S3] Length = 508 Score = 103 bits (258), Expect = 7e-21, Method: Composition-based stats. Identities = 23/139 (16%), Positives = 50/139 (35%), Gaps = 13/139 (9%) Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPG-DLGYSIPVFGMHLYTW 60 IG+ LF + G+K ++ + +++ + H D G+ + VFG+H Y W Sbjct: 55 IGVMALFIVRYGMKGKYLAALLIMTAVGLYQSFAHYGNHAHRDLDQGFGLAVFGIHTYFW 114 Query: 61 SLIFSLVIILFISVLMLFDTAEIKVAKS----------PVREIAIYLFVFLIFANFISTI 110 + + ++L + V+ F A+ + ++ +N Sbjct: 115 AEVVFWAVVLLLGVIFAFAPKFNAFEAELNGEKFRKYTKFSFAAVLISAIIVASNVFQAF 174 Query: 111 LECG--LTQCFDNPTFYQL 127 + G +P + L Sbjct: 175 VSTGIPPYVGQGDPVRFSL 193 >gi|86154001|ref|ZP_01072203.1| disulfide bond formation protein, DsbB family [Campylobacter jejuni subsp. jejuni HB93-13] gi|85842539|gb|EAQ59752.1| disulfide bond formation protein, DsbB family [Campylobacter jejuni subsp. jejuni HB93-13] gi|307746980|gb|ADN90250.1| Putative ATP/GTP binding protein [Campylobacter jejuni subsp. jejuni M1] Length = 508 Score = 103 bits (258), Expect = 7e-21, Method: Composition-based stats. Identities = 23/139 (16%), Positives = 50/139 (35%), Gaps = 13/139 (9%) Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPG-DLGYSIPVFGMHLYTW 60 IG+ LF + G+K ++ + +++ + H D G+ + VFG+H Y W Sbjct: 55 IGVMALFIVRYGMKGKYLAALLIMTAVGLYQSFAHYGNHAHRDLDQGFGLAVFGIHTYFW 114 Query: 61 SLIFSLVIILFISVLMLFDTAEIKVAKS----------PVREIAIYLFVFLIFANFISTI 110 + + ++L + V+ F A+ + ++ +N Sbjct: 115 AEVVFWAVVLLLGVIFAFAPKFNAFEAELNGEKFRKYTKFSFAAVLISAIIVASNVFQAF 174 Query: 111 LECG--LTQCFDNPTFYQL 127 + G +P + L Sbjct: 175 VSTGIPPYVGQGDPVRFSL 193 >gi|86150526|ref|ZP_01068750.1| disulfide bond formation protein, DsbB family [Campylobacter jejuni subsp. jejuni CF93-6] gi|121613521|ref|YP_999737.1| DsbB family disulfide bond formation protein [Campylobacter jejuni subsp. jejuni 81-176] gi|167004713|ref|ZP_02270471.1| disulfide bond formation protein, DsbB family [Campylobacter jejuni subsp. jejuni 81-176] gi|218561710|ref|YP_002343489.1| disulphide bond formation protein [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|85838978|gb|EAQ56243.1| disulfide bond formation protein, DsbB family [Campylobacter jejuni subsp. jejuni CF93-6] gi|87248957|gb|EAQ71919.1| disulfide bond formation protein, DsbB family [Campylobacter jejuni subsp. jejuni 81-176] gi|112359416|emb|CAL34198.1| disulphide bond formation protein [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|284925320|gb|ADC27672.1| DsbB family disulfide bond formation protein [Campylobacter jejuni subsp. jejuni IA3902] gi|315929943|gb|EFV09100.1| disulfide bond formation protein DsbB family protein [Campylobacter jejuni subsp. jejuni 305] Length = 508 Score = 103 bits (258), Expect = 7e-21, Method: Composition-based stats. Identities = 23/139 (16%), Positives = 50/139 (35%), Gaps = 13/139 (9%) Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPG-DLGYSIPVFGMHLYTW 60 IG+ LF + G+K ++ + +++ + H D G+ + VFG+H Y W Sbjct: 55 IGVMALFIVRYGMKGKYLAALLIMTAVGLYQSFAHYGNHAHRDLDQGFGLAVFGIHTYFW 114 Query: 61 SLIFSLVIILFISVLMLFDTAEIKVAKS----------PVREIAIYLFVFLIFANFISTI 110 + + ++L + V+ F A+ + ++ +N Sbjct: 115 AEVVFWAVVLLLGVIFAFAPKFNAFEAELNGEKFRKYTKFSFAAVLISAIIVASNVFQAF 174 Query: 111 LECG--LTQCFDNPTFYQL 127 + G +P + L Sbjct: 175 VSTGIPPYVGQGDPVRFSL 193 >gi|88597728|ref|ZP_01100961.1| disulfide bond formation protein, DsbB family [Campylobacter jejuni subsp. jejuni 84-25] gi|88190032|gb|EAQ94008.1| disulfide bond formation protein, DsbB family [Campylobacter jejuni subsp. jejuni 84-25] Length = 508 Score = 103 bits (258), Expect = 7e-21, Method: Composition-based stats. Identities = 23/139 (16%), Positives = 50/139 (35%), Gaps = 13/139 (9%) Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPG-DLGYSIPVFGMHLYTW 60 IG+ LF + G+K ++ + +++ + H D G+ + VFG+H Y W Sbjct: 55 IGVMALFIVRYGMKGKYLAALLIMTAVGLYQSFAHYGNHAHRDLDQGFGLAVFGIHTYFW 114 Query: 61 SLIFSLVIILFISVLMLFDTAEIKVAKS----------PVREIAIYLFVFLIFANFISTI 110 + + ++L + V+ F A+ + ++ +N Sbjct: 115 AEVVFWAVVLLLGVIFAFAPKFNAFEAELNGEKFRKYTKFSFAAVLISAIIVASNVFQAF 174 Query: 111 LECG--LTQCFDNPTFYQL 127 + G +P + L Sbjct: 175 VSTGIPPYVGQGDPVRFSL 193 >gi|157414338|ref|YP_001481594.1| disulfide bond formation protein, DsbB family [Campylobacter jejuni subsp. jejuni 81116] gi|157385302|gb|ABV51617.1| putative ATP/GTP binding protein [Campylobacter jejuni subsp. jejuni 81116] gi|315931289|gb|EFV10258.1| disulfide bond formation protein DsbB family protein [Campylobacter jejuni subsp. jejuni 327] Length = 508 Score = 103 bits (258), Expect = 7e-21, Method: Composition-based stats. Identities = 23/139 (16%), Positives = 51/139 (36%), Gaps = 13/139 (9%) Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPG-DLGYSIPVFGMHLYTW 60 IG+ LF + G+K ++ + +++ + H D G+ + VFG+H Y W Sbjct: 55 IGVMALFIVRYGMKGKYLAALLIMTAVGLYQSFAHYGNHAHRDLDQGFGLAVFGIHTYFW 114 Query: 61 SLIFSLVIILFISVLMLFDTAEIKV----------AKSPVREIAIYLFVFLIFANFISTI 110 + + ++L + V+ F + A+ + ++ +N Sbjct: 115 AEVVFWAVVLLLGVIFAFAPKFNAFETELNGEKFRKYTKFSFAAVLISTIIVASNVFQAF 174 Query: 111 LECG--LTQCFDNPTFYQL 127 + G +P + L Sbjct: 175 VSTGIPPYVGQGDPVRFSL 193 >gi|153950977|ref|YP_001397289.1| DsbB family disulfide bond formation protein [Campylobacter jejuni subsp. doylei 269.97] gi|152938423|gb|ABS43164.1| disulfide bond formation protein, DsbB family [Campylobacter jejuni subsp. doylei 269.97] Length = 508 Score = 103 bits (258), Expect = 8e-21, Method: Composition-based stats. Identities = 23/139 (16%), Positives = 51/139 (36%), Gaps = 13/139 (9%) Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPG-DLGYSIPVFGMHLYTW 60 IG+ LF + G+K ++ + +++ + H D G+ + VFG+H Y W Sbjct: 55 IGVMALFIVRYGMKGKYLAALLIMTAVGLYQSFAHYGNHAHRDLDQGFGLAVFGIHTYFW 114 Query: 61 SLIFSLVIILFISVLMLFDTAEIKV----------AKSPVREIAIYLFVFLIFANFISTI 110 + + ++L + V+ F + A+ + ++ +N Sbjct: 115 AEVVFWAVVLLLGVIFAFAPKFNAFETELNGEKFRKYTKFSFTAVLISAIIVASNVFQAF 174 Query: 111 LECG--LTQCFDNPTFYQL 127 + G +P + L Sbjct: 175 VSTGIPPYVGQGDPVRFSL 193 >gi|315928445|gb|EFV07757.1| disulfide bond formation protein DsbB family protein [Campylobacter jejuni subsp. jejuni DFVF1099] Length = 495 Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats. Identities = 23/139 (16%), Positives = 50/139 (35%), Gaps = 13/139 (9%) Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPG-DLGYSIPVFGMHLYTW 60 IG+ LF + G+K ++ + +++ + H D G+ + VFG+H Y W Sbjct: 42 IGVMALFIVRYGMKGKYLAALLIMTAVGLYQSFAHYGNHAHRDLDQGFGLAVFGIHTYFW 101 Query: 61 SLIFSLVIILFISVLMLFDTAEIKVAKS----------PVREIAIYLFVFLIFANFISTI 110 + + ++L + V+ F A+ + ++ +N Sbjct: 102 AEVVFWAVVLLLGVIFAFAPKFNAFEAELNGEKFRKYTKFSFAAVLISAIIVASNVFQAF 161 Query: 111 LECG--LTQCFDNPTFYQL 127 + G +P + L Sbjct: 162 VSTGVPPYVGQGDPVRFSL 180 >gi|315100321|gb|EFT72297.1| conserved hypothetical protein [Propionibacterium acnes HL046PA1] Length = 216 Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats. Identities = 34/112 (30%), Positives = 54/112 (48%), Gaps = 3/112 (2%) Query: 19 YSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSLIFSLVIILFISVLMLF 78 Y + IL A+ + R +L+HI PGD GY FG+ YTW+ I ++I F V+M F Sbjct: 98 YGVSILSAVLGAAESARHILLHIQPGDPGYGSKTFGLSTYTWAFITFTIVIAFCGVMMTF 157 Query: 79 DT--AEIKVAKSPVREIAIYLFVFLIFANFISTILECGLT-QCFDNPTFYQL 127 V + + ++LF ++ AN + + GL +P Y+L Sbjct: 158 APWLTPRGVKAHAISTVIMWLFALIVVANLVMIVFLEGLHFLLPGDPACYEL 209 >gi|57505823|ref|ZP_00371748.1| probable ATP /GTP binding protein Cj0017c [Campylobacter upsaliensis RM3195] gi|57015853|gb|EAL52642.1| probable ATP /GTP binding protein Cj0017c [Campylobacter upsaliensis RM3195] Length = 505 Score = 102 bits (256), Expect = 1e-20, Method: Composition-based stats. Identities = 23/139 (16%), Positives = 50/139 (35%), Gaps = 13/139 (9%) Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPG-DLGYSIPVFGMHLYTW 60 IG+ LF + G+K ++ + +++ + H D G+ + VFG+H Y W Sbjct: 55 IGVMALFIVRYGMKGKYLAALLIMTAVGLYQSFAHYGNHAHRDLDQGFGLAVFGIHTYFW 114 Query: 61 SLIFSLVIILFISVLMLFDTAEIKVAKS----------PVREIAIYLFVFLIFANFISTI 110 + + ++L + V+ F A+ + ++ +N Sbjct: 115 AEVVFWAVVLLLGVIFAFAPKFNAFEAELNGEKIRKYTKFSFAAVLISTIIVASNVFQAF 174 Query: 111 LECG--LTQCFDNPTFYQL 127 + G +P + L Sbjct: 175 VSTGIPPYVGQGDPVRFSL 193 >gi|50842993|ref|YP_056220.1| hypothetical protein PPA1515 [Propionibacterium acnes KPA171202] gi|289426393|ref|ZP_06428136.1| conserved hypothetical protein [Propionibacterium acnes SK187] gi|289428753|ref|ZP_06430436.1| conserved hypothetical protein [Propionibacterium acnes J165] gi|50840595|gb|AAT83262.1| conserved membrane protein [Propionibacterium acnes KPA171202] gi|289153121|gb|EFD01839.1| conserved hypothetical protein [Propionibacterium acnes SK187] gi|289158151|gb|EFD06371.1| conserved hypothetical protein [Propionibacterium acnes J165] gi|313763569|gb|EFS34933.1| conserved hypothetical protein [Propionibacterium acnes HL013PA1] gi|313773508|gb|EFS39474.1| conserved hypothetical protein [Propionibacterium acnes HL074PA1] gi|313793962|gb|EFS41986.1| conserved hypothetical protein [Propionibacterium acnes HL110PA1] gi|313801349|gb|EFS42600.1| conserved hypothetical protein [Propionibacterium acnes HL110PA2] gi|313807971|gb|EFS46452.1| conserved hypothetical protein [Propionibacterium acnes HL087PA2] gi|313811560|gb|EFS49274.1| conserved hypothetical protein [Propionibacterium acnes HL083PA1] gi|313813382|gb|EFS51096.1| conserved hypothetical protein [Propionibacterium acnes HL025PA1] gi|313816749|gb|EFS54463.1| conserved hypothetical protein [Propionibacterium acnes HL059PA1] gi|313819540|gb|EFS57254.1| conserved hypothetical protein [Propionibacterium acnes HL046PA2] gi|313822137|gb|EFS59851.1| conserved hypothetical protein [Propionibacterium acnes HL036PA1] gi|313823629|gb|EFS61343.1| conserved hypothetical protein [Propionibacterium acnes HL036PA2] gi|313825953|gb|EFS63667.1| conserved hypothetical protein [Propionibacterium acnes HL063PA1] gi|313829420|gb|EFS67134.1| conserved hypothetical protein [Propionibacterium acnes HL063PA2] gi|313831300|gb|EFS69014.1| conserved hypothetical protein [Propionibacterium acnes HL007PA1] gi|313834911|gb|EFS72625.1| conserved hypothetical protein [Propionibacterium acnes HL056PA1] gi|313839930|gb|EFS77644.1| conserved hypothetical protein [Propionibacterium acnes HL086PA1] gi|314914723|gb|EFS78554.1| conserved hypothetical protein [Propionibacterium acnes HL005PA4] gi|314919315|gb|EFS83146.1| conserved hypothetical protein [Propionibacterium acnes HL050PA1] gi|314920775|gb|EFS84606.1| conserved hypothetical protein [Propionibacterium acnes HL050PA3] gi|314924722|gb|EFS88553.1| conserved hypothetical protein [Propionibacterium acnes HL036PA3] gi|314930454|gb|EFS94285.1| conserved hypothetical protein [Propionibacterium acnes HL067PA1] gi|314954389|gb|EFS98795.1| conserved hypothetical protein [Propionibacterium acnes HL027PA1] gi|314957478|gb|EFT01581.1| conserved hypothetical protein [Propionibacterium acnes HL002PA1] gi|314962107|gb|EFT06208.1| conserved hypothetical protein [Propionibacterium acnes HL002PA2] gi|314963686|gb|EFT07786.1| conserved hypothetical protein [Propionibacterium acnes HL082PA1] gi|314968486|gb|EFT12584.1| conserved hypothetical protein [Propionibacterium acnes HL037PA1] gi|314974176|gb|EFT18272.1| conserved hypothetical protein [Propionibacterium acnes HL053PA1] gi|314976534|gb|EFT20629.1| conserved hypothetical protein [Propionibacterium acnes HL045PA1] gi|314978903|gb|EFT22997.1| conserved hypothetical protein [Propionibacterium acnes HL072PA2] gi|314984353|gb|EFT28445.1| conserved hypothetical protein [Propionibacterium acnes HL005PA1] gi|314986543|gb|EFT30635.1| conserved hypothetical protein [Propionibacterium acnes HL005PA2] gi|314990902|gb|EFT34993.1| conserved hypothetical protein [Propionibacterium acnes HL005PA3] gi|315079536|gb|EFT51529.1| conserved hypothetical protein [Propionibacterium acnes HL053PA2] gi|315081236|gb|EFT53212.1| conserved hypothetical protein [Propionibacterium acnes HL078PA1] gi|315083602|gb|EFT55578.1| conserved hypothetical protein [Propionibacterium acnes HL027PA2] gi|315087119|gb|EFT59095.1| conserved hypothetical protein [Propionibacterium acnes HL002PA3] gi|315089292|gb|EFT61268.1| conserved hypothetical protein [Propionibacterium acnes HL072PA1] gi|315095315|gb|EFT67291.1| conserved hypothetical protein [Propionibacterium acnes HL038PA1] gi|315099196|gb|EFT71172.1| conserved hypothetical protein [Propionibacterium acnes HL059PA2] gi|315106753|gb|EFT78729.1| conserved hypothetical protein [Propionibacterium acnes HL030PA1] gi|315108995|gb|EFT80971.1| conserved hypothetical protein [Propionibacterium acnes HL030PA2] gi|327328422|gb|EGE70184.1| hypothetical protein HMPREF9338_01439 [Propionibacterium acnes HL096PA2] gi|327329712|gb|EGE71468.1| hypothetical protein HMPREF9337_01776 [Propionibacterium acnes HL096PA3] gi|327334228|gb|EGE75942.1| hypothetical protein HMPREF9344_01129 [Propionibacterium acnes HL097PA1] gi|327444209|gb|EGE90863.1| hypothetical protein HMPREF9571_02340 [Propionibacterium acnes HL043PA2] gi|327444912|gb|EGE91566.1| hypothetical protein HMPREF9570_01974 [Propionibacterium acnes HL043PA1] gi|327446397|gb|EGE93051.1| hypothetical protein HMPREF9568_00979 [Propionibacterium acnes HL013PA2] gi|327452015|gb|EGE98669.1| hypothetical protein HMPREF9584_02221 [Propionibacterium acnes HL092PA1] gi|327454948|gb|EGF01603.1| hypothetical protein HMPREF9581_01136 [Propionibacterium acnes HL087PA3] gi|327457766|gb|EGF04421.1| hypothetical protein HMPREF9586_00342 [Propionibacterium acnes HL083PA2] gi|328752152|gb|EGF65768.1| hypothetical protein HMPREF9563_02421 [Propionibacterium acnes HL020PA1] gi|328755219|gb|EGF68835.1| hypothetical protein HMPREF9579_01246 [Propionibacterium acnes HL087PA1] gi|328758302|gb|EGF71918.1| hypothetical protein HMPREF9588_00942 [Propionibacterium acnes HL025PA2] gi|328760027|gb|EGF73608.1| hypothetical protein HMPREF9343_02235 [Propionibacterium acnes HL099PA1] gi|332675943|gb|AEE72759.1| putative transmembrane protein [Propionibacterium acnes 266] Length = 216 Score = 102 bits (256), Expect = 1e-20, Method: Composition-based stats. Identities = 34/112 (30%), Positives = 54/112 (48%), Gaps = 3/112 (2%) Query: 19 YSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSLIFSLVIILFISVLMLF 78 Y + IL A+ + R +L+HI PGD GY FG+ YTW+ I ++I F V+M F Sbjct: 98 YGVSILSAVLGAAESARHILLHIQPGDPGYGSKAFGLSTYTWAFITFTIVIAFCGVMMTF 157 Query: 79 DT--AEIKVAKSPVREIAIYLFVFLIFANFISTILECGLT-QCFDNPTFYQL 127 V + + ++LF ++ AN + + GL +P Y+L Sbjct: 158 APWLTPRGVKAHAISTVIMWLFALIVVANLVMIVFLEGLHFLLPGDPACYEL 209 >gi|223040679|ref|ZP_03610948.1| disulfide bond formation protein, DsbB family [Campylobacter rectus RM3267] gi|222878043|gb|EEF13155.1| disulfide bond formation protein, DsbB family [Campylobacter rectus RM3267] Length = 518 Score = 102 bits (255), Expect = 1e-20, Method: Composition-based stats. Identities = 26/139 (18%), Positives = 50/139 (35%), Gaps = 12/139 (8%) Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGD--LGYSIPVFGMHLY 58 +IG+ +F L G K ++ S + + A ++ R + D +G+ +FG H Y Sbjct: 49 LIGVLGIFILRYGAKIKYVSAVFICAAYGLFMSIRHTSLDGFAWDVGMGFGDAIFGAHTY 108 Query: 59 TWSLIFSLVIILFISVLMLFDTAEIKVAKS--------PVREIAIYLFVFLIFANFISTI 110 TW ++L + V++LF + + + + +I +N Sbjct: 109 TWGAFVYWAVVLVMPVMLLFAPKVQNLDEQSESFNPFSAYTTAIVAISFAVIVSNAFQAF 168 Query: 111 LECG--LTQCFDNPTFYQL 127 G P L Sbjct: 169 FSTGVPPFSGKGEPERISL 187 >gi|115314520|ref|YP_763243.1| hypothetical protein FTH_0654 [Francisella tularensis subsp. holarctica OSU18] gi|115129419|gb|ABI82606.1| conserved hypothetical protein [Francisella tularensis subsp. holarctica OSU18] Length = 176 Score = 102 bits (254), Expect = 2e-20, Method: Composition-based stats. Identities = 38/115 (33%), Positives = 64/115 (55%), Gaps = 1/115 (0%) Query: 12 SGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSLIFSLVIILF 71 G +HY ++IL A+ +A Q+L+HI+PG Y VF +H+YTW+ I S++ IL+ Sbjct: 62 HGNNYKHYLLIILVALLNAAMAITQILLHIVPGTGNYGEAVFSLHMYTWNFIVSIIFILY 121 Query: 72 ISVL-MLFDTAEIKVAKSPVREIAIYLFVFLIFANFISTILECGLTQCFDNPTFY 125 ++ ++ K S + ++AI L + L AN ++ +ECG C +P Y Sbjct: 122 AAICGLITPNENKKKKLSILAKLAIILILILTVANTLNVFVECGPHLCPSDPNSY 176 >gi|237753331|ref|ZP_04583811.1| conserved hypothetical protein [Helicobacter winghamensis ATCC BAA-430] gi|229375598|gb|EEO25689.1| conserved hypothetical protein [Helicobacter winghamensis ATCC BAA-430] Length = 505 Score = 102 bits (254), Expect = 2e-20, Method: Composition-based stats. Identities = 27/139 (19%), Positives = 54/139 (38%), Gaps = 13/139 (9%) Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPG-DLGYSIPVFGMHLYTW 60 IG+ F + GIK ++ S +++ + H + D G+ + VFG+H Y W Sbjct: 55 IGVIAFFIIRYGIKGKYVSALLIVTAFGLYQSLAHFGNHAMRDLDQGFGLAVFGIHTYFW 114 Query: 61 SLIFSLVIILFISVLMLFDTAEIKVAKSPVRE----------IAIYLFVFLIFANFISTI 110 + + ++L + V+ F + + IA+ + F+I +N Sbjct: 115 AEVVFWAVVLLLGVIFAFAPKFGEFDTEMAGKKIRDWTKFSFIAVLITTFIIASNVFQAF 174 Query: 111 LECG--LTQCFDNPTFYQL 127 + G +P + L Sbjct: 175 VSTGIPPYAGQGDPVRFSL 193 >gi|217033540|ref|ZP_03438969.1| hypothetical protein HP9810_905g59 [Helicobacter pylori 98-10] gi|216944065|gb|EEC23496.1| hypothetical protein HP9810_905g59 [Helicobacter pylori 98-10] Length = 489 Score = 101 bits (253), Expect = 3e-20, Method: Composition-based stats. Identities = 24/133 (18%), Positives = 55/133 (41%), Gaps = 6/133 (4%) Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDL-GYSIPVFGMHLYT 59 +IG L + G K ++ ++++L A + H L G+S+ + G+H Sbjct: 51 LIGAVALLVVRFGFKPKYIALLLLMASSGLYEGFYYTGSHALEDVGQGFSLAILGLHTQF 110 Query: 60 WSLIFSLVIILFISVLMLFDTAEI---KVAKSPVREIAIYLFVFLIFANFISTILECGLT 116 W+L ++ + VL+ F + + +++ A Y+F ++ +N + + G Sbjct: 111 WALFVFFSVVAILGVLLFFAPNTQLFKDYSLNTLQKSAFYIFFIVVGSNAVQAFISTGPF 170 Query: 117 QCFD--NPTFYQL 127 +P + Sbjct: 171 PYVGQSSPVRFSW 183 >gi|297379797|gb|ADI34684.1| DsbB-like protein [Helicobacter pylori v225d] Length = 490 Score = 101 bits (253), Expect = 3e-20, Method: Composition-based stats. Identities = 24/133 (18%), Positives = 58/133 (43%), Gaps = 6/133 (4%) Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDL-GYSIPVFGMHLYT 59 +IG L + G K ++ ++++L A + + H L G+++ + G+H Sbjct: 51 LIGAVALLVVRFGFKPKYIALLLLMASSGLYESFYHTSSHALEDVGQGFALAILGLHTQF 110 Query: 60 WSLIFSLVIILFISVLMLFDTAEI---KVAKSPVREIAIYLFVFLIFANFISTILECGLT 116 W+L +++F++VL+ F + + +++ A Y+F ++ +N + G Sbjct: 111 WALFVFFSVVVFLAVLLFFAPNTQLFKDYSLNTLQKSAFYVFFIVVGSNAVQAFFSTGPF 170 Query: 117 QCFD--NPTFYQL 127 +P + Sbjct: 171 PYIGQSDPVRFSW 183 >gi|223039985|ref|ZP_03610267.1| disulfide bond formation protein, DsbB family [Campylobacter rectus RM3267] gi|222878705|gb|EEF13804.1| disulfide bond formation protein, DsbB family [Campylobacter rectus RM3267] Length = 504 Score = 101 bits (253), Expect = 3e-20, Method: Composition-based stats. Identities = 24/139 (17%), Positives = 53/139 (38%), Gaps = 13/139 (9%) Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPG-DLGYSIPVFGMHLYTW 60 IG+ LF + G+K ++ +++++ + IH D G+ + VFG+H Y W Sbjct: 55 IGVMALFIVRYGLKAKYLAMLLVMTGFGLWQSFAHFGIHAHRDLDQGFGLAVFGIHTYFW 114 Query: 61 SLIFSLVIILFISVLMLFDTAEIKVAKS----------PVREIAIYLFVFLIFANFISTI 110 + + +++ + + F + + A + F+I +N Sbjct: 115 AEVVFWAVVVLLGAIFFFAPKFSALEEEMGGDTIRKFGSFTRAAFIVCAFIIASNVFQAF 174 Query: 111 LECG--LTQCFDNPTFYQL 127 + G +P + L Sbjct: 175 VSTGIPPYYGQGDPVRFTL 193 >gi|108563000|ref|YP_627316.1| hypothetical protein HPAG1_0575 [Helicobacter pylori HPAG1] gi|107836773|gb|ABF84642.1| DsbB-like protein [Helicobacter pylori HPAG1] Length = 490 Score = 101 bits (251), Expect = 4e-20, Method: Composition-based stats. Identities = 24/132 (18%), Positives = 57/132 (43%), Gaps = 6/132 (4%) Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDL-GYSIPVFGMHLYTW 60 IG L + G K ++ ++++L A + + H L G+++ + G+H W Sbjct: 52 IGAVALLVVRFGFKPKYIALLLLMASSGLYESFYHTGSHALEDVGQGFALAILGLHTQFW 111 Query: 61 SLIFSLVIILFISVLMLFDTAEIKVA---KSPVREIAIYLFVFLIFANFISTILECGLTQ 117 +L +++F++VL+ F + +++ A Y+F ++ +N + + G Sbjct: 112 ALFVFFSVVVFLAVLLFFAPNTQPFKDHSLNALQKSAFYVFFIVVGSNAVQAFISTGPFP 171 Query: 118 CFD--NPTFYQL 127 +P + Sbjct: 172 YIGQSDPVRFSW 183 >gi|317177572|dbj|BAJ55361.1| DsbB-like protein [Helicobacter pylori F16] Length = 489 Score = 101 bits (251), Expect = 5e-20, Method: Composition-based stats. Identities = 24/133 (18%), Positives = 55/133 (41%), Gaps = 6/133 (4%) Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDL-GYSIPVFGMHLYT 59 +IG L + G K ++ ++++L A + H L G+S+ + G+H Sbjct: 51 LIGAVALLVVRFGFKPKYIALLLLMASSGLYEGFYYTGSHALEDVGQGFSLAILGLHTQF 110 Query: 60 WSLIFSLVIILFISVLMLFDTAEI---KVAKSPVREIAIYLFVFLIFANFISTILECGLT 116 W+L ++ + VL+ F + + +++ A Y+F ++ +N + + G Sbjct: 111 WALFVFFSVVALLGVLLFFAPNTQLFKDYSLNTLQKSAFYIFFIVVGSNAVQAFISTGPF 170 Query: 117 QCFD--NPTFYQL 127 +P + Sbjct: 171 PYVGQSSPVRFSW 183 >gi|153001068|ref|YP_001366749.1| disulfide bond formation protein DsbB [Shewanella baltica OS185] gi|151365686|gb|ABS08686.1| Disulphide bond formation protein DsbB [Shewanella baltica OS185] Length = 478 Score = 99.9 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 25/133 (18%), Positives = 62/133 (46%), Gaps = 9/133 (6%) Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDL-GYSIPVFGMHLYT 59 ++ + L+ + G+K ++ + ++ I +A+ I++ G+S+ + G H YT Sbjct: 50 LVALTALYIVRFGLKPKYIAALVWLGIYGAFMASVHTSINLGSDIGQGFSLKIMGAHTYT 109 Query: 60 WSLIFSLVIILFISVLMLF------DTAEIKVAKSPVREIAIYLFVFLIFANFISTILEC 113 W+L + +++ +++LML + K + ++A ++F+ +I N + + Sbjct: 110 WALFVFVTVLIVVALLMLTLGNKFPNNGYGKQPLDTLPKVACWIFLVVISGNIVQAFTQT 169 Query: 114 G--LTQCFDNPTF 124 G D+P Sbjct: 170 GPLPFVGQDSPGR 182 >gi|328907652|gb|EGG27416.1| conserved membrane protein [Propionibacterium sp. P08] Length = 188 Score = 99.9 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 33/112 (29%), Positives = 53/112 (47%), Gaps = 3/112 (2%) Query: 19 YSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSLIFSLVIILFISVLMLF 78 Y + IL AI + R +L+HI PGD GY G+ YTW+ I +++I F V+M F Sbjct: 70 YGVSILSAILGGAESARHILLHIQPGDPGYGSKALGLSTYTWAFITFVIVIAFCGVMMTF 129 Query: 79 DT--AEIKVAKSPVREIAIYLFVFLIFANFISTILECGLT-QCFDNPTFYQL 127 V + + ++LF ++ AN + + G +P Y+L Sbjct: 130 APWLTPRGVKTHALSAVIMWLFALIVVANLVMIVFLEGFHVLLPGDPACYEL 181 >gi|260913349|ref|ZP_05919830.1| conserved hypothetical protein [Pasteurella dagmatis ATCC 43325] gi|260632580|gb|EEX50750.1| conserved hypothetical protein [Pasteurella dagmatis ATCC 43325] Length = 497 Score = 99.9 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 23/132 (17%), Positives = 47/132 (35%), Gaps = 10/132 (7%) Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGD-LGYSIPVFGMHLYTW 60 + F+ + G K ++ +I + R G+ + G H YTW Sbjct: 51 VMFAFM-IVRYGPKPKYVGWIIFIGVFGMFAGFRHSSGSFAWDIHQGWWAEILGAHTYTW 109 Query: 61 SLIFSLVIILFISVLMLFDTAEIKV------AKSPVREIAIYLFVFLIFANFISTILECG 114 ++ V+++F ++L LF S + + + F+ ++ N + + G Sbjct: 110 PIVIQGVVLVFTALLFLFTKNVYSFVSESYKPFSKLTKTTMVAFMVVVAGNIVQAFISTG 169 Query: 115 --LTQCFDNPTF 124 NPT Sbjct: 170 YPPNMGVGNPTR 181 >gi|254779412|ref|YP_003057517.1| putative disulfide oxidoreductase B (DsbB-like protein); putative membrane protein [Helicobacter pylori B38] gi|254001323|emb|CAX29308.1| Putative disulfide oxidoreductase B (DsbB-like protein); putative membrane protein [Helicobacter pylori B38] Length = 490 Score = 99.1 bits (246), Expect = 2e-19, Method: Composition-based stats. Identities = 22/133 (16%), Positives = 56/133 (42%), Gaps = 6/133 (4%) Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDL-GYSIPVFGMHLYT 59 +IG L + G K ++ ++++L A + + H L G+++ + G+H Sbjct: 51 LIGAVALLVVRFGFKPKYIALLLLMASSGLYESFYHTGSHALEDVGQGFALAILGLHTQF 110 Query: 60 WSLIFSLVIILFISVLMLFDTAEIKVA---KSPVREIAIYLFVFLIFANFISTILECGLT 116 W+L ++ +++L+ F + +++ A Y+F ++ +N + + G Sbjct: 111 WALFVFFSVVALLALLLFFAPNAQPFKDRLLNALQKSAFYVFFIVVGSNAVQAFVSTGPF 170 Query: 117 QCFD--NPTFYQL 127 +P + Sbjct: 171 PYIGQSDPVRFSW 183 >gi|284007427|emb|CBA72860.1| conserved hypothetical protein [Arsenophonus nasoniae] Length = 151 Score = 98.3 bits (244), Expect = 3e-19, Method: Composition-based stats. Identities = 79/99 (79%), Positives = 86/99 (86%) Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60 MIGIGFLFNLI GI QRHYSI+I +ITTC+ ATRQVLIHILPGD GY VFG+HLYTW Sbjct: 53 MIGIGFLFNLILGINQRHYSIIIFSSITTCMTATRQVLIHILPGDPGYYSTVFGLHLYTW 112 Query: 61 SLIFSLVIILFISVLMLFDTAEIKVAKSPVREIAIYLFV 99 SL+FSL IILFISVLMLF+TAEI+VAKSP REIAIYL Sbjct: 113 SLLFSLAIILFISVLMLFNTAEIQVAKSPAREIAIYLCF 151 >gi|161613607|ref|YP_001587572.1| hypothetical protein SPAB_01330 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|161362971|gb|ABX66739.1| hypothetical protein SPAB_01330 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|323220563|gb|EGA05014.1| hypothetical protein SEEM0047_12171 [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] Length = 132 Score = 98.3 bits (244), Expect = 3e-19, Method: Composition-based stats. Identities = 45/113 (39%), Positives = 74/113 (65%), Gaps = 4/113 (3%) Query: 21 IMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSLIFSLVIILFISVLMLFDT 80 ++I+G+I T ++A+RQ+ +HI+PGD GY FG+H YTW+LI S++II+ ++V++ + Sbjct: 1 MVIIGSILTGVMASRQICLHIMPGDTGYGSAFFGLHFYTWTLITSILIIIAVAVILAISS 60 Query: 81 AEIKVA----KSPVREIAIYLFVFLIFANFISTILECGLTQCFDNPTFYQLLN 129 + + I ++F+ LI AN IST+LECG +C NP Y+LL+ Sbjct: 61 MNVAFRSLNINPDLFSIVGWVFLLLITANLISTVLECGGGECAANPVTYKLLS 113 >gi|295131064|ref|YP_003581727.1| hypothetical protein HMPREF0675_4582 [Propionibacterium acnes SK137] gi|291377094|gb|ADE00949.1| conserved hypothetical protein [Propionibacterium acnes SK137] Length = 188 Score = 97.9 bits (243), Expect = 4e-19, Method: Composition-based stats. Identities = 34/112 (30%), Positives = 54/112 (48%), Gaps = 3/112 (2%) Query: 19 YSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSLIFSLVIILFISVLMLF 78 Y + IL A+ + R +L+HI PGD GY FG+ YTW+ I ++I F V+M F Sbjct: 70 YGVSILSAVLGAAESARHILLHIQPGDPGYGSKAFGLSTYTWAFITFTIVIAFCGVMMTF 129 Query: 79 DT--AEIKVAKSPVREIAIYLFVFLIFANFISTILECGLT-QCFDNPTFYQL 127 V + + ++LF ++ AN + + GL +P Y+L Sbjct: 130 APWLTPRGVKAHAISTVIMWLFALIVVANLVMIVFLEGLHFLLPGDPACYEL 181 >gi|223038973|ref|ZP_03609265.1| conserved hypothetical protein [Campylobacter rectus RM3267] gi|222879946|gb|EEF15035.1| conserved hypothetical protein [Campylobacter rectus RM3267] Length = 519 Score = 97.9 bits (243), Expect = 4e-19, Method: Composition-based stats. Identities = 22/130 (16%), Positives = 51/130 (39%), Gaps = 13/130 (10%) Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPG-DLGYSIPVFGMHLYT 59 ++G+ LF L G + R+ + A + R + + D+G + G+ YT Sbjct: 52 LVGLLGLFILRYGPRPRYVVAVFFIAAFGMHMGLRHLGNFVQLDVDMGLGASILGVRTYT 111 Query: 60 WSLIFSLVIILFISVLMLFDTAEIKVAK------------SPVREIAIYLFVFLIFANFI 107 W+ I +++ +S+ ++F ++ + ++ YL L+ +N + Sbjct: 112 WAAIVYWAVVIVMSLFLIFIKKSAELNADFSGQRSVIKPFNAYGKVVFYLSFALVISNGV 171 Query: 108 STILECGLTQ 117 G+ Sbjct: 172 QAFFTNGIPP 181 >gi|312882601|ref|ZP_07742341.1| membrane protein [Vibrio caribbenthicus ATCC BAA-2122] gi|309369761|gb|EFP97273.1| membrane protein [Vibrio caribbenthicus ATCC BAA-2122] Length = 89 Score = 97.9 bits (243), Expect = 4e-19, Method: Composition-based stats. Identities = 27/89 (30%), Positives = 43/89 (48%), Gaps = 3/89 (3%) Query: 44 GDLGYSIPVFGMHLYTWSLIFSLVIILFISVLMLFDTAE---IKVAKSPVREIAIYLFVF 100 G GY P+FGMH YTW+ + +L +++L++ E S + L + Sbjct: 1 GTPGYGSPIFGMHYYTWAFVLFGATVLGVALLLILWNEEWNSQSFTMSGFGRLVCLLAIT 60 Query: 101 LIFANFISTILECGLTQCFDNPTFYQLLN 129 + NF+ST ECG +C +P Y L + Sbjct: 61 AVALNFVSTFAECGPYECPADPVSYWLFS 89 >gi|308061927|gb|ADO03815.1| DsbB-like protein [Helicobacter pylori Cuz20] Length = 490 Score = 97.2 bits (241), Expect = 6e-19, Method: Composition-based stats. Identities = 23/133 (17%), Positives = 57/133 (42%), Gaps = 6/133 (4%) Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDL-GYSIPVFGMHLYT 59 +IG L + G K ++ ++++L A + + H L G+++ + G+H Sbjct: 51 LIGAVALLVVRFGFKPKYIALLLLMASSGLYESFYHTSSHALEDVGQGFALAILGLHTQF 110 Query: 60 WSLIFSLVIILFISVLMLFDTAEI---KVAKSPVREIAIYLFVFLIFANFISTILECGLT 116 W+L +++ ++VL+ F + + +++ A Y+F ++ +N + G Sbjct: 111 WALFVFFSVVVLLAVLLFFAPNTQLFKDYSLNTLQKSAFYVFFIVVGSNAVQAFFSTGPF 170 Query: 117 QCFD--NPTFYQL 127 +P + Sbjct: 171 PYIGQSDPVRFSW 183 >gi|317180366|dbj|BAJ58152.1| DsbB-like protein [Helicobacter pylori F32] Length = 490 Score = 96.8 bits (240), Expect = 8e-19, Method: Composition-based stats. Identities = 22/133 (16%), Positives = 56/133 (42%), Gaps = 6/133 (4%) Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDL-GYSIPVFGMHLYT 59 +IG L + G K ++ ++++ A + + H L G+++ + G+H Sbjct: 51 LIGAVALLVVRFGFKPKYIALLLFMASSGLYESFYHTSSHALEDVGQGFALAILGLHTQF 110 Query: 60 WSLIFSLVIILFISVLMLFDTAEI---KVAKSPVREIAIYLFVFLIFANFISTILECGLT 116 W+L +++ ++VL+ F + + +++ A Y+F ++ +N + G Sbjct: 111 WALFVFFSVVVLLAVLLFFAPNTQLFKDDSLNTLQKSAFYIFFIVVGSNAVQAFFSTGPF 170 Query: 117 QCFD--NPTFYQL 127 +P + Sbjct: 171 PYIGQSDPVRFSW 183 >gi|317181910|dbj|BAJ59694.1| DsbB-like protein [Helicobacter pylori F57] Length = 490 Score = 96.8 bits (240), Expect = 9e-19, Method: Composition-based stats. Identities = 23/133 (17%), Positives = 57/133 (42%), Gaps = 6/133 (4%) Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDL-GYSIPVFGMHLYT 59 +IG L + G K ++ ++++L A + + H L G+++ + G+H Sbjct: 51 LIGAVALLVVRFGFKPKYIALLLLMASSGLYESFYHTSSHALEDVGQGFALAILGLHTQF 110 Query: 60 WSLIFSLVIILFISVLMLFDTAE---IKVAKSPVREIAIYLFVFLIFANFISTILECGLT 116 W+L +++ ++VL+ F + + +++ A Y+F ++ +N + G Sbjct: 111 WALFVFFSVVVLLAVLLFFAPNTPLFKNYSLNTLQKSAFYIFFIVVGSNAVQAFFSTGPF 170 Query: 117 QCFD--NPTFYQL 127 +P + Sbjct: 171 PYIGQSDPVRFSW 183 >gi|261839577|gb|ACX99342.1| DsbB-like protein [Helicobacter pylori 52] Length = 490 Score = 96.8 bits (240), Expect = 9e-19, Method: Composition-based stats. Identities = 24/133 (18%), Positives = 56/133 (42%), Gaps = 6/133 (4%) Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDL-GYSIPVFGMHLYT 59 +IG L + G K ++ ++++L A + + H L G+++ + G+H Sbjct: 51 LIGAVALLVVRFGFKPKYIALLLLMASSGLYESFYHTSSHALEDVGQGFALAILGLHTQF 110 Query: 60 WSLIFSLVIILFISVLMLFDTAEIKVAKSP---VREIAIYLFVFLIFANFISTILECGLT 116 W+L +++ ++VL+ F P +++ A Y+F ++ +N + G Sbjct: 111 WALFVFFSVVVLLAVLLFFAPNTPLFKNYPLNTLQKSAFYIFFIVVGSNAVQAFFSTGPF 170 Query: 117 QCFD--NPTFYQL 127 +P + Sbjct: 171 PYIGQSDPVRFSW 183 >gi|15645220|ref|NP_207390.1| hypothetical protein HP0595 [Helicobacter pylori 26695] gi|2313718|gb|AAD07664.1| predicted coding region HP0595 [Helicobacter pylori 26695] Length = 490 Score = 96.8 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 24/133 (18%), Positives = 58/133 (43%), Gaps = 6/133 (4%) Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDL-GYSIPVFGMHLYT 59 +IG L + G K ++ ++++L A + + H L G+++ + G+H Sbjct: 51 LIGAVALLVVRFGFKPKYIALLLLMASSGLYESFYHTGSHALEDVGQGFALAILGLHTQF 110 Query: 60 WSLIFSLVIILFISVLMLFDTAEIKVA---KSPVREIAIYLFVFLIFANFISTILECGLT 116 W+L +++ ++VL+ F + +++IA Y+F ++ +N + + G Sbjct: 111 WALFVFFSVVVLLAVLLFFAPNAQPFKDHSLNALQKIAFYVFFMVVGSNAVQAFISTGPF 170 Query: 117 QCFD--NPTFYQL 127 +P + Sbjct: 171 PYIGQSDPVRFSW 183 >gi|188527557|ref|YP_001910244.1| DsbB-like protein [Helicobacter pylori Shi470] gi|188143797|gb|ACD48214.1| DsbB-like protein [Helicobacter pylori Shi470] Length = 490 Score = 96.4 bits (239), Expect = 1e-18, Method: Composition-based stats. Identities = 23/133 (17%), Positives = 56/133 (42%), Gaps = 6/133 (4%) Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDL-GYSIPVFGMHLYT 59 +IG L + G K ++ ++++L A + + H L G+++ + G+H Sbjct: 51 LIGAVALLVVRFGFKPKYIALLLLMASSGLYESFYHTSSHALEDVGQGFALAILGLHTQF 110 Query: 60 WSLIFSLVIILFISVLMLFDTA---EIKVAKSPVREIAIYLFVFLIFANFISTILECGLT 116 W+L +++ ++VL+ F + +++ A Y+F ++ +N + G Sbjct: 111 WALFVFFSVVVLLAVLLFFAPNAQLFKDYPLNTLQKSAFYVFFIVVGSNAVQAFFSTGPF 170 Query: 117 QCFD--NPTFYQL 127 +P + Sbjct: 171 PYIGQSDPVRFSW 183 >gi|317014016|gb|ADU81452.1| hypothetical protein HPGAM_03060 [Helicobacter pylori Gambia94/24] Length = 490 Score = 96.4 bits (239), Expect = 1e-18, Method: Composition-based stats. Identities = 24/133 (18%), Positives = 57/133 (42%), Gaps = 6/133 (4%) Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDL-GYSIPVFGMHLYT 59 +IG L + G K ++ ++++L A + + H L G+++ + G+H Sbjct: 51 LIGAVALLVVRFGFKPKYIALLLLMASSGLYESFYHTGGHALEDVGQGFALAILGLHTQF 110 Query: 60 WSLIFSLVIILFISVLMLFDTAEIKVA---KSPVREIAIYLFVFLIFANFISTILECGLT 116 W+L +++ ++VL+ F + +++ A Y+F ++ +N I + G Sbjct: 111 WALFVFFSVVVLLAVLLFFAPNAQPFKDRLLNTLQKSAFYVFFIVVGSNAIQAFVSTGPF 170 Query: 117 QCFD--NPTFYQL 127 +P + Sbjct: 171 PYIGQSDPVRFSW 183 >gi|317010816|gb|ADU84563.1| hypothetical protein HPSA_02780 [Helicobacter pylori SouthAfrica7] Length = 490 Score = 96.4 bits (239), Expect = 1e-18, Method: Composition-based stats. Identities = 22/133 (16%), Positives = 56/133 (42%), Gaps = 6/133 (4%) Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDL-GYSIPVFGMHLYT 59 +IG L + G K ++ ++++L A + + H L G+++ + G+H Sbjct: 51 LIGAVALLVVRFGFKPKYIALLLLMASSGLYESFYHTSSHALEDVGQGFALAILGLHTQF 110 Query: 60 WSLIFSLVIILFISVLMLFDTAEIKVA---KSPVREIAIYLFVFLIFANFISTILECGLT 116 W+L +++ +++L+ F + +++ A +F ++ +N I + G Sbjct: 111 WALFVFFSVVVLLALLLFFAPNTQPFKDRLLNALQKSAFCVFFIVVGSNAIQAFVSTGPF 170 Query: 117 QCFD--NPTFYQL 127 +P + Sbjct: 171 PYIGQSDPVRFSW 183 >gi|308184378|ref|YP_003928511.1| putative disulfide oxidoreductase B (DsbB-like protein); putative membrane protein [Helicobacter pylori SJM180] gi|308060298|gb|ADO02194.1| putative disulfide oxidoreductase B (DsbB-like protein); putative membrane protein [Helicobacter pylori SJM180] Length = 490 Score = 96.0 bits (238), Expect = 1e-18, Method: Composition-based stats. Identities = 23/133 (17%), Positives = 57/133 (42%), Gaps = 6/133 (4%) Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDL-GYSIPVFGMHLYT 59 +IG L + G K ++ ++++L A + + H L G+++ + G+H Sbjct: 51 LIGAVALLVVRFGFKPKYIALLLLMASSGLYESFYHTGSHALEDVGQGFALAILGLHTQF 110 Query: 60 WSLIFSLVIILFISVLMLFDTAEIKVA---KSPVREIAIYLFVFLIFANFISTILECGLT 116 W+L +++ ++VL+ F + +++ A Y+F ++ +N + + G Sbjct: 111 WALFVFFSVVVLLAVLLFFAPNTQPFKVRLLNTLQKSAFYVFFMVVGSNAVQAFISTGPF 170 Query: 117 QCFD--NPTFYQL 127 +P + Sbjct: 171 PYIGQSDPVRFSW 183 >gi|261838162|gb|ACX97928.1| DsbB-like protein [Helicobacter pylori 51] Length = 490 Score = 96.0 bits (238), Expect = 1e-18, Method: Composition-based stats. Identities = 22/133 (16%), Positives = 56/133 (42%), Gaps = 6/133 (4%) Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDL-GYSIPVFGMHLYT 59 +IG L + G K ++ ++++ A + + H L G+++ + G+H Sbjct: 51 LIGAVALLVVRFGFKPKYIALLLFMAGSGLYESFYHTSSHALEDVGQGFALAILGLHTQF 110 Query: 60 WSLIFSLVIILFISVLMLFDTAEI---KVAKSPVREIAIYLFVFLIFANFISTILECGLT 116 W+L +++ ++VL+ F + + +++ A Y+F ++ +N + G Sbjct: 111 WALFVFFSVVVLLAVLLFFAPNTQLFKNYSLNTLQKSAFYVFFIVVGSNAVQAFFSTGPF 170 Query: 117 QCFD--NPTFYQL 127 +P + Sbjct: 171 PYIGQSDPVRFSW 183 >gi|308063615|gb|ADO05502.1| DsbB-like protein [Helicobacter pylori Sat464] Length = 490 Score = 95.6 bits (237), Expect = 2e-18, Method: Composition-based stats. Identities = 23/133 (17%), Positives = 58/133 (43%), Gaps = 6/133 (4%) Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDL-GYSIPVFGMHLYT 59 +IG L + G K ++ ++++L A + + H L G+++ + G+H Sbjct: 51 LIGAVALLVVRFGFKPKYIALLLLMASSGLYESFYHTGSHALEDVGQGFALAILGLHTQF 110 Query: 60 WSLIFSLVIILFISVLMLFDTAEI---KVAKSPVREIAIYLFVFLIFANFISTILECGLT 116 W+L +++ ++VL+ F + + + +++ A Y+F ++ +N + G Sbjct: 111 WALFVFFSVVVLLAVLLFFASNTQLFKDYSLNTLQKSAFYVFFIVVGSNAVQAFFSTGPF 170 Query: 117 QCFD--NPTFYQL 127 +P + Sbjct: 171 PYIGQSDPVRFSW 183 >gi|315586720|gb|ADU41101.1| DsbB family protein [Helicobacter pylori 35A] Length = 489 Score = 95.6 bits (237), Expect = 2e-18, Method: Composition-based stats. Identities = 25/133 (18%), Positives = 58/133 (43%), Gaps = 6/133 (4%) Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDL-GYSIPVFGMHLYT 59 +IG L + G K ++ ++++L A + H L G+++ + G+H Sbjct: 51 LIGAVALLVVRFGFKPKYIALLLLMASSGLYEGFYYTGSHALEDVGQGFALAILGLHTQF 110 Query: 60 WSLIFSLVIILFISVLMLFDTAE---IKVAKSPVREIAIYLFVFLIFANFISTILECGLT 116 W+L +++F++VL+ F + + +++ A Y+F ++ +N + + G Sbjct: 111 WALFVFFSVVVFLAVLLFFAPNTPLFKDYSLNTLQKSAFYIFFIVVGSNAVQAFISTGPF 170 Query: 117 QCFD--NPTFYQL 127 NP + Sbjct: 171 PYVGQSNPVRFSW 183 >gi|332673607|gb|AEE70424.1| DsbB family protein [Helicobacter pylori 83] Length = 489 Score = 95.6 bits (237), Expect = 2e-18, Method: Composition-based stats. Identities = 26/133 (19%), Positives = 59/133 (44%), Gaps = 6/133 (4%) Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDL-GYSIPVFGMHLYT 59 +IG L + G K ++ ++++L A + H L G+++P+ G+H Sbjct: 51 LIGAVALLVVRFGFKPKYIALLLLMAGSGLYEGFYYTGSHALEDVGQGFALPILGLHTQF 110 Query: 60 WSLIFSLVIILFISVLMLFDTAEI---KVAKSPVREIAIYLFVFLIFANFISTILECG-- 114 W+L +++F++VL+ F + + +++ A Y+F ++ +N + + G Sbjct: 111 WALFVFFSVVVFLAVLLFFAPNTQLFKNYSLNTLQKSAFYIFFIVVGSNAVQAFISTGPL 170 Query: 115 LTQCFDNPTFYQL 127 NP + Sbjct: 171 PYIGQSNPVRFSW 183 >gi|210134796|ref|YP_002301235.1| dsbb-like protein [Helicobacter pylori P12] gi|210132764|gb|ACJ07755.1| dsbb-like protein [Helicobacter pylori P12] Length = 490 Score = 94.5 bits (234), Expect = 4e-18, Method: Composition-based stats. Identities = 22/133 (16%), Positives = 55/133 (41%), Gaps = 6/133 (4%) Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDL-GYSIPVFGMHLYT 59 +IG L + G K ++ ++++ A + + H L G++ + G+H Sbjct: 51 LIGAVALLVVRFGFKPKYIALLLFMASSGLYESFYHTGSHALEDVGQGFAFAILGLHTQF 110 Query: 60 WSLIFSLVIILFISVLMLFDTAEI---KVAKSPVREIAIYLFVFLIFANFISTILECGLT 116 W+L +++ ++VL+ F + +++ A Y+F ++ +N + + G Sbjct: 111 WALFVFFSVVVLLAVLLFFAPNTQLFKDYPLNALQKSAFYVFFMVVGSNAVQAFISTGPF 170 Query: 117 QCFD--NPTFYQL 127 +P + Sbjct: 171 PYIGQSDPVRFSW 183 >gi|317179041|dbj|BAJ56829.1| DsbB-like protein [Helicobacter pylori F30] Length = 489 Score = 94.5 bits (234), Expect = 5e-18, Method: Composition-based stats. Identities = 25/133 (18%), Positives = 58/133 (43%), Gaps = 6/133 (4%) Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDL-GYSIPVFGMHLYT 59 +IG L + G K ++ ++++L A + H L G+++P+ G+H Sbjct: 51 LIGAVALLVVRFGFKPKYIALLLLMASSGLYEGFYYTGSHALEDIGQGFALPILGLHTQF 110 Query: 60 WSLIFSLVIILFISVLMLFDTAEI---KVAKSPVREIAIYLFVFLIFANFISTILECGLT 116 W+L +++F+ VL+ F + + +++ A Y+F ++ +N + + G Sbjct: 111 WALFVFFSVVVFLGVLLFFAPNTQLFKNYSLNTLQKSAFYIFFIVVGSNAVQAFISTGPF 170 Query: 117 QCFD--NPTFYQL 127 +P + Sbjct: 171 PYVGQSSPVRFSW 183 >gi|322380685|ref|ZP_08054830.1| disulfide bond formation protein [Helicobacter suis HS5] gi|321146895|gb|EFX41650.1| disulfide bond formation protein [Helicobacter suis HS5] Length = 569 Score = 93.7 bits (232), Expect = 7e-18, Method: Composition-based stats. Identities = 24/133 (18%), Positives = 52/133 (39%), Gaps = 7/133 (5%) Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDL-GYSIPVFGMHLYTW 60 I + LF L G+K ++ ++M+L + + + H L G+++ +F +H W Sbjct: 51 IALSGLFILRYGLKPKYIALMLLIIVGGLYQSFYHLGNHALEDVGQGFALTIFRLHTQFW 110 Query: 61 SLIFSLVIILFISVLMLFDT----AEIKVAKSPVREIAIYLFVFLIFANFISTILECGLT 116 + + + L + L+ F + + A +F L+ +N + + G Sbjct: 111 AELVFWLAALVLGSLLFFAPNFNTQDHPRQLTRSNRWAFAIFSALVASNMLQAFISTGPF 170 Query: 117 QCF--DNPTFYQL 127 NP + Sbjct: 171 PYLGHGNPIRFSW 183 >gi|322378597|ref|ZP_08053037.1| DsbB-like protein [Helicobacter suis HS1] gi|321149005|gb|EFX43465.1| DsbB-like protein [Helicobacter suis HS1] Length = 567 Score = 93.7 bits (232), Expect = 7e-18, Method: Composition-based stats. Identities = 24/133 (18%), Positives = 52/133 (39%), Gaps = 7/133 (5%) Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDL-GYSIPVFGMHLYTW 60 I + LF L G+K ++ ++M+L + + + H L G+++ +F +H W Sbjct: 49 IALSGLFILRYGLKPKYIALMLLIIVGGLYQSFYHLGNHALEDVGQGFALTIFRLHTQFW 108 Query: 61 SLIFSLVIILFISVLMLFDT----AEIKVAKSPVREIAIYLFVFLIFANFISTILECGLT 116 + + + L + L+ F + + A +F L+ +N + + G Sbjct: 109 AELVFWLAALVLGSLLFFAPNFNTQDHPRQLTRSNRWAFAIFSALVASNMLQAFISTGPF 168 Query: 117 QCF--DNPTFYQL 127 NP + Sbjct: 169 PYLGHGNPIRFSW 181 >gi|302206945|gb|ADL11287.1| Disulfide bond formation protein DsbB [Corynebacterium pseudotuberculosis C231] gi|308277199|gb|ADO27098.1| Disulfide bond formation protein DsbB [Corynebacterium pseudotuberculosis I19] Length = 496 Score = 92.9 bits (230), Expect = 1e-17, Method: Composition-based stats. Identities = 26/140 (18%), Positives = 53/140 (37%), Gaps = 15/140 (10%) Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDL-GYSIPVFGMHLYT 59 +IG +F L G + R+ ++L A R G+ V G+H YT Sbjct: 51 LIGALGVFILRYGARMRYVVTLLLVAFYYLYTTVRHWGGRANADLGQGFGDAVLGVHTYT 110 Query: 60 WSLIFSLVIILFISVLMLFDTAEIKVAK------------SPVREIAIYLFVFLIFANFI 107 W ++ V+I +++ ++F + + K SP + + + + AN + Sbjct: 111 WGILVYWVVIGVLAIGLIFIGKDKMLQKEFTSSELEVKKFSPATKFVAIVAIVITCANCV 170 Query: 108 STILECG--LTQCFDNPTFY 125 ++ G +P + Sbjct: 171 QFLIGNGIPPYAGAGDPARF 190 >gi|38234617|ref|NP_940384.1| hypothetical protein DIP2060 [Corynebacterium diphtheriae NCTC 13129] gi|38200881|emb|CAE50586.1| Putative membrane protein [Corynebacterium diphtheriae] Length = 476 Score = 92.2 bits (228), Expect = 2e-17, Method: Composition-based stats. Identities = 23/140 (16%), Positives = 50/140 (35%), Gaps = 15/140 (10%) Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDL-GYSIPVFGMHLYT 59 +IG +F L G + R+ ++L A R G+ V G+H YT Sbjct: 51 LIGALGVFILRYGARMRYIVTLLLVAFYYLYTTVRHWGGRASADLGQGFGDAVLGVHTYT 110 Query: 60 WSLIFSLVIILFISVLMLFDTAEIKVAKS------------PVREIAIYLFVFLIFANFI 107 W ++ V+I +++ ++F + + + P + + + +N + Sbjct: 111 WGILVYWVVIGVLAIGLIFIGKDKALQQEFISSEAVVKDFGPATRFVAIVAIVITCSNCV 170 Query: 108 STILECG--LTQCFDNPTFY 125 + G +P + Sbjct: 171 QFLFGNGIPPYAGAGDPARF 190 >gi|222824339|ref|YP_002575913.1| disulfide bond formation protein, DsbB family [Campylobacter lari RM2100] gi|222539560|gb|ACM64661.1| disulfide bond formation protein, DsbB family [Campylobacter lari RM2100] Length = 528 Score = 92.2 bits (228), Expect = 2e-17, Method: Composition-based stats. Identities = 22/139 (15%), Positives = 49/139 (35%), Gaps = 15/139 (10%) Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDL-GYSIPVFGMHLYT 59 +IG+ + L G + ++ + L A + R G + G H YT Sbjct: 56 IIGVLGMLILRYGPQIKYIVCVFLFAGYGIYMGIRHTASWWQRDIGIGLGDKLVGAHTYT 115 Query: 60 WSLIFSLVIILFISVLMLFDTAEIKVAKSPV------------REIAIYLFVFLIFANFI 107 W+++ +++ + + +LF + + V ++ I L ++ +N Sbjct: 116 WAVVVYWCVVVVMGLALLFIRKNSSMMQDLVNEKISVKPLNGYSKLVIILSFIVVCSNAF 175 Query: 108 STILECG--LTQCFDNPTF 124 ++ G NP Sbjct: 176 QALIINGIPPYTGKSNPDR 194 >gi|289807693|ref|ZP_06538322.1| hypothetical protein Salmonellaentericaenterica_26102 [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 121 Score = 89.5 bits (221), Expect = 1e-16, Method: Composition-based stats. Identities = 38/94 (40%), Positives = 57/94 (60%), Gaps = 4/94 (4%) Query: 40 HILPGDLGYSIPVFGMHLYTWSLIFSLVIILFISVLMLFDTAEIKVA----KSPVREIAI 95 HI+PGD GY FG+H YTW+LI S++II+ ++V++ + + I Sbjct: 9 HIMPGDTGYGSAFFGLHFYTWTLITSILIIIAVAVVLAISSMNAAFRSLNINPNLFSIVG 68 Query: 96 YLFVFLIFANFISTILECGLTQCFDNPTFYQLLN 129 ++F+ LI AN IST+LECG +C NP Y+LL+ Sbjct: 69 WVFLLLITANLISTVLECGGGECAANPVTYKLLS 102 >gi|319941675|ref|ZP_08015998.1| disulfide bond formation protein [Sutterella wadsworthensis 3_1_45B] gi|319804796|gb|EFW01658.1| disulfide bond formation protein [Sutterella wadsworthensis 3_1_45B] Length = 511 Score = 88.7 bits (219), Expect = 3e-16, Method: Composition-based stats. Identities = 21/139 (15%), Positives = 48/139 (34%), Gaps = 13/139 (9%) Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDL-GYSIPVFGMHLYTW 60 IG+ LF + G K ++ + M++ A + R + H G+ + + G+H W Sbjct: 64 IGVVALFMVRYGFKPKYLATMLVMAAVGLWSSFRHLGNHAARDVGQGFGLEIMGLHTQMW 123 Query: 61 SLIFSLVIILFISVLMLFDTAEIKVAKSPVRE----------IAIYLFVFLIFANFISTI 110 + I +++ + + + + IA + F++ +N Sbjct: 124 AEIVFWCVVMLFGLALFLAPRFDALIAEFKGKRWRPTTGFMQIAFGIVSFILASNAFQAA 183 Query: 111 LECG--LTQCFDNPTFYQL 127 G +P + Sbjct: 184 WTTGLPPNWGQGDPWRFSW 202 >gi|308182757|ref|YP_003926884.1| DsbB-like protein [Helicobacter pylori PeCan4] gi|308064942|gb|ADO06834.1| DsbB-like protein [Helicobacter pylori PeCan4] Length = 489 Score = 88.7 bits (219), Expect = 3e-16, Method: Composition-based stats. Identities = 25/133 (18%), Positives = 58/133 (43%), Gaps = 6/133 (4%) Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDL-GYSIPVFGMHLYT 59 +IG L + G K ++ ++++L A + V H L G++I + G+H Sbjct: 51 LIGAVALLVVRFGFKPKYIALLLLMAGSGLYEGFYYVGSHALEDVGQGFAIAILGLHTQF 110 Query: 60 WSLIFSLVIILFISVLMLFDTAEI---KVAKSPVREIAIYLFVFLIFANFISTILECGLT 116 W+L +++ ++VL+ F + + +++ A Y+F ++ +N + + G Sbjct: 111 WALFVFFSVVVLLAVLLFFAPNTQLFKDYSLNTLQKSAFYVFFIVVGSNAVQAFISTGPF 170 Query: 117 QCFD--NPTFYQL 127 +P + Sbjct: 171 PYVGQSSPVRFSW 183 >gi|300859255|ref|YP_003784238.1| hypothetical protein cpfrc_01838 [Corynebacterium pseudotuberculosis FRC41] gi|300686709|gb|ADK29631.1| putative membrane protein [Corynebacterium pseudotuberculosis FRC41] Length = 376 Score = 88.3 bits (218), Expect = 3e-16, Method: Composition-based stats. Identities = 26/140 (18%), Positives = 53/140 (37%), Gaps = 15/140 (10%) Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDL-GYSIPVFGMHLYT 59 +IG +F L G + R+ ++L A R G+ V G+H YT Sbjct: 51 LIGALGVFILRYGARMRYVVTLLLVAFYYLYTTVRHWGGRANADLGQGFGDAVLGVHTYT 110 Query: 60 WSLIFSLVIILFISVLMLFDTAEIKVAK------------SPVREIAIYLFVFLIFANFI 107 W ++ V+I +++ ++F + + K SP + + + + AN + Sbjct: 111 WGILVYWVVIGVLAIGLIFIGKDKMLQKEFTSSELEVKKFSPATKFVAIVAIVITCANCV 170 Query: 108 STILECG--LTQCFDNPTFY 125 ++ G +P + Sbjct: 171 QFLIGNGIPPYAGAGDPARF 190 >gi|308049255|ref|YP_003912821.1| disulfide bond formation protein DsbB [Ferrimonas balearica DSM 9799] gi|307631445|gb|ADN75747.1| Disulfide bond formation protein DsbB [Ferrimonas balearica DSM 9799] Length = 486 Score = 87.5 bits (216), Expect = 5e-16, Method: Composition-based stats. Identities = 31/132 (23%), Positives = 56/132 (42%), Gaps = 8/132 (6%) Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDL-GYSIPVFGMHLYT 59 ++ + LF G+K ++ +++L AI R HIL G+ +FG+H Y Sbjct: 55 LVSLIALFITRYGLKPKYIGLLLLTAIYGLFAGYRHSSAHILRDIGQGFGPAIFGVHTYV 114 Query: 60 WSLIFSLVIILFISVLML-----FDTAEIKVAKSPVREIAIYLFVFLIFANFISTILECG 114 W ++ LV++LF VL+L K + + A +F+ +I N + + G Sbjct: 115 WVMVVFLVVLLFAGVLLLLQGDKLVQWTEKTRWEGLNKAAANVFLVVIAFNIVQAFSQTG 174 Query: 115 --LTQCFDNPTF 124 +P Sbjct: 175 PAPFLGQGDPVR 186 >gi|302535716|ref|ZP_07288058.1| predicted protein [Streptomyces sp. C] gi|302444611|gb|EFL16427.1| predicted protein [Streptomyces sp. C] Length = 216 Score = 84.9 bits (209), Expect = 4e-15, Method: Composition-based stats. Identities = 31/118 (26%), Positives = 56/118 (47%), Gaps = 8/118 (6%) Query: 19 YSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSLIFSLVIILFISVLMLF 78 + + I+ A+ ++ QVL+HI+P D GY+ +FG+HLYTW+ I L+ +L +V ++ Sbjct: 95 WGVAIVSALIGSTVSASQVLMHIVPPDPGYAGALFGLHLYTWAAITFLLAVLAAAVNLVL 154 Query: 79 DTAEIKV-------AKSPVREIAIYLFVFLIFANFISTILECGLTQ-CFDNPTFYQLL 128 + A + + F +N ++ L GL +PT Y+ Sbjct: 155 AREFQPLGAAQASPALRRAAGFTLAVLAFFAVSNLVACFLLQGLHWQMPGDPTGYRFF 212 >gi|167625924|ref|YP_001676218.1| disulfide bond formation protein DsbB [Shewanella halifaxensis HAW-EB4] gi|167355946|gb|ABZ78559.1| Disulphide bond formation protein DsbB [Shewanella halifaxensis HAW-EB4] Length = 478 Score = 83.3 bits (205), Expect = 9e-15, Method: Composition-based stats. Identities = 28/133 (21%), Positives = 63/133 (47%), Gaps = 9/133 (6%) Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDL-GYSIPVFGMHLYT 59 +I + L+++ G+K ++ + ++ + +A I++ G+S+ + G H YT Sbjct: 50 LIALTALYSVRYGLKPKYIAALVWLGVYGAFMAAVHTSINLGSDIGQGFSLKIMGAHTYT 109 Query: 60 WSLIFSLVIILFISVLMLF------DTAEIKVAKSPVREIAIYLFVFLIFANFISTILEC 113 W+L +++++ +++LM D A K A P+ + A +F+ +I N + + Sbjct: 110 WALFVFVMVLVVVALLMFTLGNKFPDNAYGKKALDPLPKYAFIVFLVVIAGNIVQAFTQT 169 Query: 114 GLTQCF--DNPTF 124 G D+P Sbjct: 170 GPAPFIGQDSPGR 182 >gi|254384695|ref|ZP_05000033.1| conserved hypothetical protein [Streptomyces sp. Mg1] gi|194343578|gb|EDX24544.1| conserved hypothetical protein [Streptomyces sp. Mg1] Length = 214 Score = 82.2 bits (202), Expect = 2e-14, Method: Composition-based stats. Identities = 29/120 (24%), Positives = 49/120 (40%), Gaps = 9/120 (7%) Query: 19 YSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSLIFSLVIILFISVLMLF 78 + + ++ A + RQ +HILPG G V G+HLY W+ I + + I V++ F Sbjct: 74 WGLALVAATGGSFASWRQTALHILPGAKGQGAEVLGLHLYVWAWILFQLSVAAIGVVLAF 133 Query: 79 DTAEIKVAKSP--------VREIAIYLFVFLIFANFISTILECGLTQC-FDNPTFYQLLN 129 A A V A++ + + + LE G D+P Y+ + Sbjct: 134 AHATADRAIPTSGPGPYRAVGLFALWFLGAAVALSLAAVFLEQGFHWFLPDDPGRYEFFH 193 >gi|113971986|ref|YP_735779.1| disulfide bond formation protein DsbB [Shewanella sp. MR-4] gi|113886670|gb|ABI40722.1| Disulphide bond formation protein DsbB [Shewanella sp. MR-4] Length = 478 Score = 82.2 bits (202), Expect = 2e-14, Method: Composition-based stats. Identities = 27/133 (20%), Positives = 61/133 (45%), Gaps = 9/133 (6%) Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDL-GYSIPVFGMHLYT 59 ++ + L+ + G+K ++ + ++ I +A+ I++ G+S+ + G H YT Sbjct: 50 LVALTALYIVRFGLKPKYIAALVWLGIYGAFMASVHTSINLGSDIGQGFSLKIMGAHTYT 109 Query: 60 WSLIFSLVIILFISVLMLF------DTAEIKVAKSPVREIAIYLFVFLIFANFISTILEC 113 W+L +V+++ +++LML K + +IA +F+ +I N + + Sbjct: 110 WALFVFVVVLIVVALLMLTLGNKFPSNGYGKQPLDTLPKIACGVFLVVISGNIVQAFTQT 169 Query: 114 G--LTQCFDNPTF 124 G D+P Sbjct: 170 GPLPFVGQDSPGR 182 >gi|114045799|ref|YP_736349.1| disulfide bond formation protein DsbB [Shewanella sp. MR-7] gi|113887241|gb|ABI41292.1| Disulphide bond formation protein DsbB [Shewanella sp. MR-7] Length = 478 Score = 82.2 bits (202), Expect = 2e-14, Method: Composition-based stats. Identities = 27/133 (20%), Positives = 61/133 (45%), Gaps = 9/133 (6%) Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDL-GYSIPVFGMHLYT 59 ++ + L+ + G+K ++ + ++ I +A+ I++ G+S+ + G H YT Sbjct: 50 LVALTALYIVRFGLKPKYIAALVWLGIYGAFMASVHTSINLGSDIGQGFSLKIMGAHTYT 109 Query: 60 WSLIFSLVIILFISVLMLF------DTAEIKVAKSPVREIAIYLFVFLIFANFISTILEC 113 W+L +V+++ +++LML K + +IA +F+ +I N + + Sbjct: 110 WALFVFVVVLIVVALLMLTLGNKFPSNGYGKQPLDTLPKIACGVFLVVISGNIVQAFTQT 169 Query: 114 G--LTQCFDNPTF 124 G D+P Sbjct: 170 GPLPFVGQDSPGR 182 >gi|315452684|ref|YP_004072954.1| disulfide bond formation protein [Helicobacter felis ATCC 49179] gi|315131736|emb|CBY82364.1| disulfide bond formation protein [Helicobacter felis ATCC 49179] Length = 573 Score = 81.0 bits (199), Expect = 5e-14, Method: Composition-based stats. Identities = 24/145 (16%), Positives = 52/145 (35%), Gaps = 19/145 (13%) Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDL-GYSIPVFGMHLYTW 60 IG+ LF L G+K ++ +I++L + H L G+++ + G+H W Sbjct: 52 IGLAGLFILRYGLKPKYLAILLLIVAGGLYQSFYHYGNHALEDVGQGFALSILGLHTQFW 111 Query: 61 SLIFSLVIILFISVLMLFDTAEIKVAKS----------------PVREIAIYLFVFLIFA 104 + + ++L + L+LF + +A+ A + + Sbjct: 112 AHVVFWFVVLILGGLLLFAPSFQVLAQEGGVYAHGSRRTYRDLTKANNWAFLIVGVIAIT 171 Query: 105 NFISTILECGLTQ--CFDNPTFYQL 127 N + + G +P + Sbjct: 172 NMVQAFISTGPFPYLGQGDPIRFSW 196 >gi|83269709|ref|YP_419000.1| Frizzled protein [Brucella melitensis biovar Abortus 2308] gi|237817269|ref|ZP_04596261.1| Frizzled protein [Brucella abortus str. 2308 A] gi|82939983|emb|CAJ13012.1| Frizzled protein [Brucella melitensis biovar Abortus 2308] gi|237788082|gb|EEP62298.1| Frizzled protein [Brucella abortus str. 2308 A] Length = 208 Score = 80.6 bits (198), Expect = 6e-14, Method: Composition-based stats. Identities = 33/128 (25%), Positives = 53/128 (41%), Gaps = 11/128 (8%) Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLG--YSIPVFGMHLYT 59 + G + L G R I +L AI II+ RQ L+ I P VFG+H+ Sbjct: 68 VCFGVMLQLRYGPSFRFSGIGLLFAIVLLIISVRQTLLDIYPRPGHEYIGSTVFGLHMPV 127 Query: 60 WSLIFSLVIILFISVLMLFDTAEIKVAKSP---------VREIAIYLFVFLIFANFISTI 110 WS++ +LV+I +V M+ + + I + + N S Sbjct: 128 WSILIALVLIAAFAVQMMVWGGRHGQTIAQIKNHPVINGLGTILALYVLAVATINMASVF 187 Query: 111 LECGLTQC 118 ++CG+ QC Sbjct: 188 VQCGVGQC 195 >gi|308049207|ref|YP_003912773.1| disulfide bond formation protein DsbB [Ferrimonas balearica DSM 9799] gi|307631397|gb|ADN75699.1| Disulfide bond formation protein DsbB [Ferrimonas balearica DSM 9799] Length = 487 Score = 79.8 bits (196), Expect = 1e-13, Method: Composition-based stats. Identities = 25/133 (18%), Positives = 60/133 (45%), Gaps = 9/133 (6%) Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDL-GYSIPVFGMHLYT 59 ++ + L+ + G+K ++ ++ I +A+ I++ G+S+ + G H YT Sbjct: 52 LVALTALYIVRFGLKPKYIGALVWLGIYGAWMASVHTSINLGSDIGQGFSVKIMGAHTYT 111 Query: 60 WSLIFSLVIILFISVLMLF------DTAEIKVAKSPVREIAIYLFVFLIFANFISTILEC 113 W+L+ +V+++ ++ LM+F + ++ +F+F+I N + + Sbjct: 112 WALLVFVVVLVVVAALMMFLGNRFPGKPTQTPGNPALVKVVASVFLFVISGNIVQAFTQT 171 Query: 114 G--LTQCFDNPTF 124 G D+P Sbjct: 172 GPPPFVGQDSPGR 184 >gi|110633609|ref|YP_673817.1| disulfide bond formation protein DsbB, putative [Mesorhizobium sp. BNC1] gi|110284593|gb|ABG62652.1| disulfide bond formation protein DsbB, putative [Chelativorans sp. BNC1] Length = 215 Score = 78.3 bits (192), Expect = 3e-13, Method: Composition-based stats. Identities = 29/128 (22%), Positives = 63/128 (49%), Gaps = 11/128 (8%) Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLG--YSIPVFGMHLYT 59 + G + +G R+ +L + +++ RQ L+ I P VFG+H+ Sbjct: 69 VCFGIMQQFRNGFSVRNTGFSLLFTVFLLVVSVRQTLLDIYPRPGHEYIGSAVFGLHMPV 128 Query: 60 WSLIFSLVIILFISVLMLFDTAEIKVAKSPVREI--------AIYLFVFLI-FANFISTI 110 WS++ +L +++ + ++F + + + ++ + + A+ L+V LI NF S + Sbjct: 129 WSVLIALALLIAFTFELIFWSGKNHMHEARLTGLPVIRGLATALSLYVILIGLVNFGSVV 188 Query: 111 LECGLTQC 118 L+CG+ +C Sbjct: 189 LQCGVGEC 196 >gi|213021900|ref|ZP_03336347.1| hypothetical protein Salmonelentericaenterica_03902 [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 97 Score = 77.5 bits (190), Expect = 5e-13, Method: Composition-based stats. Identities = 35/92 (38%), Positives = 53/92 (57%), Gaps = 4/92 (4%) Query: 37 VLIHILPGDLGYSIPVFGMHLYTWSLIFSLVIILFISVLMLFDTAEIKVA----KSPVRE 92 + HI+PGD GY FG+H YTW+LI S++II+ ++V++ + + Sbjct: 5 IFCHIMPGDTGYGSAFFGLHFYTWTLITSILIIIAVAVVLAISSMNAAFRSLNINPNLFS 64 Query: 93 IAIYLFVFLIFANFISTILECGLTQCFDNPTF 124 I ++F+ LI AN IST+LECG +C NP Sbjct: 65 IVGWVFLLLITANLISTVLECGGGECAANPVH 96 >gi|163844533|ref|YP_001622188.1| hypothetical protein BSUIS_B0362 [Brucella suis ATCC 23445] gi|163675256|gb|ABY39366.1| Hypothetical protein, conserved [Brucella suis ATCC 23445] Length = 208 Score = 77.1 bits (189), Expect = 7e-13, Method: Composition-based stats. Identities = 33/128 (25%), Positives = 53/128 (41%), Gaps = 11/128 (8%) Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLG--YSIPVFGMHLYT 59 + G + L G R I +L AI II+ RQ L+ I P VFG+H+ Sbjct: 68 VCFGVMLQLRYGPSFRFSGIGLLFAIVLLIISVRQTLLDIYPRPGHEYIGSTVFGLHMPV 127 Query: 60 WSLIFSLVIILFISVLMLFDTAEIKVAKSP---------VREIAIYLFVFLIFANFISTI 110 WS++ +L +I +V M+F + + I + + N S Sbjct: 128 WSILIALALIAAFAVQMMFWGGRHGQTIAQIKNHPVINGLGTILALYVLAVATINMASVF 187 Query: 111 LECGLTQC 118 ++CG+ QC Sbjct: 188 VQCGVGQC 195 >gi|23500110|ref|NP_699550.1| disulfide bond formation protein DsbB [Brucella suis 1330] gi|161620429|ref|YP_001594315.1| disulfide bond formation protein DsbB [Brucella canis ATCC 23365] gi|254702754|ref|ZP_05164582.1| disulfide bond formation protein DsbB [Brucella suis bv. 3 str. 686] gi|23463704|gb|AAN33555.1| disulfide bond formation protein DsbB, putative [Brucella suis 1330] gi|161337240|gb|ABX63544.1| disulfide bond formation protein DsbB [Brucella canis ATCC 23365] Length = 208 Score = 76.8 bits (188), Expect = 8e-13, Method: Composition-based stats. Identities = 33/128 (25%), Positives = 53/128 (41%), Gaps = 11/128 (8%) Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLG--YSIPVFGMHLYT 59 + G + L G R I +L AI II+ RQ L+ I P VFG+H+ Sbjct: 68 VCFGVMLQLRYGPSFRFSGIGLLFAIVLLIISVRQTLLDIYPRPGHEYIGSTVFGLHMPV 127 Query: 60 WSLIFSLVIILFISVLMLFDTAEIKVAKSP---------VREIAIYLFVFLIFANFISTI 110 WS++ +L +I +V M+F + + I + + N S Sbjct: 128 WSILIALALIAAFAVQMMFWGGRHGQTIAQIKNHPVINGLGTILALYVLAVATINMASVF 187 Query: 111 LECGLTQC 118 ++CG+ QC Sbjct: 188 VQCGVGQC 195 >gi|260568339|ref|ZP_05838808.1| frizzled protein [Brucella suis bv. 4 str. 40] gi|261753349|ref|ZP_05997058.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686] gi|260155004|gb|EEW90085.1| frizzled protein [Brucella suis bv. 4 str. 40] gi|261743102|gb|EEY31028.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686] Length = 203 Score = 76.4 bits (187), Expect = 1e-12, Method: Composition-based stats. Identities = 33/128 (25%), Positives = 53/128 (41%), Gaps = 11/128 (8%) Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLG--YSIPVFGMHLYT 59 + G + L G R I +L AI II+ RQ L+ I P VFG+H+ Sbjct: 63 VCFGVMLQLRYGPSFRFSGIGLLFAIVLLIISVRQTLLDIYPRPGHEYIGSTVFGLHMPV 122 Query: 60 WSLIFSLVIILFISVLMLFDTAEIKVAKSP---------VREIAIYLFVFLIFANFISTI 110 WS++ +L +I +V M+F + + I + + N S Sbjct: 123 WSILIALALIAAFAVQMMFWGGRHGQTIAQIKNHPVINGLGTILALYVLAVATINMASVF 182 Query: 111 LECGLTQC 118 ++CG+ QC Sbjct: 183 VQCGVGQC 190 >gi|254699631|ref|ZP_05161459.1| Frizzled protein [Brucella suis bv. 5 str. 513] gi|261750095|ref|ZP_05993804.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513] gi|261739848|gb|EEY27774.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513] Length = 203 Score = 76.0 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 32/128 (25%), Positives = 52/128 (40%), Gaps = 11/128 (8%) Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLG--YSIPVFGMHLYT 59 + G + L G R I +L AI II+ RQ L+ I P VFG+H+ Sbjct: 68 VCFGVMLQLRYGPSFRFSGIGLLFAIVLLIISVRQTLLDIYPRPGHEYIGSTVFGLHMPV 127 Query: 60 WSLIFSLVIILFISVLMLFDTAEIKVAKSP---------VREIAIYLFVFLIFANFISTI 110 WS++ +L +I +V M+ + + I + + N S Sbjct: 128 WSILIALALIAAFAVQMMVWGGRHGQTIAQIKNHPVINGLGTILALYVLAVATINMASVF 187 Query: 111 LECGLTQC 118 ++CG+ QC Sbjct: 188 VQCGVGQC 195 >gi|254720565|ref|ZP_05182376.1| Frizzled protein [Brucella sp. 83/13] gi|306838068|ref|ZP_07470925.1| Frizzled protein [Brucella sp. NF 2653] gi|306406805|gb|EFM63027.1| Frizzled protein [Brucella sp. NF 2653] Length = 208 Score = 76.0 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 32/128 (25%), Positives = 54/128 (42%), Gaps = 11/128 (8%) Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLG--YSIPVFGMHLYT 59 + G + L G R I +L AI II+ RQ L+ I P VFG+H+ Sbjct: 68 VCFGIMLQLRYGPSFRFSGIGLLFAIVLLIISVRQTLLDIYPRPGHEYIGSTVFGLHMPV 127 Query: 60 WSLIFSLVIILFISVLMLFDTAEIKVAKSPVRE---------IAIYLFVFLIFANFISTI 110 WS++ +L +I +V M+ + +++ I + + N S Sbjct: 128 WSILIALALIAAFAVQMMVWGGRHGQTITQIKKYPVINGLGTILALYVLAVATINMASVF 187 Query: 111 LECGLTQC 118 ++CG+ QC Sbjct: 188 VQCGVGQC 195 >gi|33592616|ref|NP_880260.1| hypothetical protein BP1525 [Bordetella pertussis Tohama I] gi|33572262|emb|CAE41814.1| putative membrane protein [Bordetella pertussis Tohama I] gi|332382033|gb|AEE66880.1| hypothetical protein BPTD_1507 [Bordetella pertussis CS] Length = 159 Score = 75.6 bits (185), Expect = 2e-12, Method: Composition-based stats. Identities = 20/107 (18%), Positives = 42/107 (39%), Gaps = 12/107 (11%) Query: 9 NLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSLIFSLVI 68 N+ G HY++++ A+ A Q+L P + P G W+ + + Sbjct: 61 NVRMGPSPLHYAMVLAPALGGLTAAGWQLL---SPDAGAAAPPWQG-----WAFLLFGAM 112 Query: 69 ILFISVLMLFDTAEIKVAKSP----VREIAIYLFVFLIFANFISTIL 111 +++ ++++ D A + + LF+ + AN T L Sbjct: 113 LVYCTLMLAADRKWGDNALKKPVALPGALVMGLFLVAVLANAAGTAL 159 >gi|265985598|ref|ZP_06098333.1| conserved hypothetical protein [Brucella sp. 83/13] gi|264664190|gb|EEZ34451.1| conserved hypothetical protein [Brucella sp. 83/13] Length = 203 Score = 75.6 bits (185), Expect = 2e-12, Method: Composition-based stats. Identities = 32/128 (25%), Positives = 54/128 (42%), Gaps = 11/128 (8%) Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLG--YSIPVFGMHLYT 59 + G + L G R I +L AI II+ RQ L+ I P VFG+H+ Sbjct: 63 VCFGIMLQLRYGPSFRFSGIGLLFAIVLLIISVRQTLLDIYPRPGHEYIGSTVFGLHMPV 122 Query: 60 WSLIFSLVIILFISVLMLFDTAEIKVAKSPVRE---------IAIYLFVFLIFANFISTI 110 WS++ +L +I +V M+ + +++ I + + N S Sbjct: 123 WSILIALALIAAFAVQMMVWGGRHGQTITQIKKYPVINGLGTILALYVLAVATINMASVF 182 Query: 111 LECGLTQC 118 ++CG+ QC Sbjct: 183 VQCGVGQC 190 >gi|306840813|ref|ZP_07473560.1| Frizzled protein [Brucella sp. BO2] gi|306289208|gb|EFM60457.1| Frizzled protein [Brucella sp. BO2] Length = 208 Score = 75.6 bits (185), Expect = 2e-12, Method: Composition-based stats. Identities = 32/128 (25%), Positives = 52/128 (40%), Gaps = 11/128 (8%) Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLG--YSIPVFGMHLYT 59 + G + L G R I +L AI II+ RQ L+ I P VFG+H+ Sbjct: 68 VCFGIMLQLRYGPSFRFSGIGLLFAIVLLIISVRQTLLDIYPRPGHEYIGSTVFGLHMPV 127 Query: 60 WSLIFSLVIILFISVLMLFDTAEIKVAKSP---------VREIAIYLFVFLIFANFISTI 110 WS++ +L +I +V M+ + + I + + N S Sbjct: 128 WSILIALALIAAFAVQMMVWGGRHGQTITQIKNHPVINGLGTILALYVLAVATINMASVF 187 Query: 111 LECGLTQC 118 ++CG+ QC Sbjct: 188 VQCGVGQC 195 >gi|254695467|ref|ZP_05157295.1| Frizzled protein [Brucella abortus bv. 3 str. Tulya] Length = 208 Score = 75.6 bits (185), Expect = 2e-12, Method: Composition-based stats. Identities = 32/128 (25%), Positives = 52/128 (40%), Gaps = 11/128 (8%) Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLG--YSIPVFGMHLYT 59 + G + L G R I +L AI II+ RQ L+ I P VFG+H+ Sbjct: 68 VCFGVMLQLRYGPSFRFSGIGLLFAIVLLIISVRQTLLDIYPRPGHEYIGSTVFGLHMPV 127 Query: 60 WSLIFSLVIILFISVLMLFDTAEIKVAKSP---------VREIAIYLFVFLIFANFISTI 110 WS++ +L +I +V M+ + + I + + N S Sbjct: 128 WSILIALALIAAFAVQMMVWGGRHGQTIAQIKNHPVINGLGTILALYVLAVATINMASVF 187 Query: 111 LECGLTQC 118 ++CG+ QC Sbjct: 188 VQCGVGQC 195 >gi|62317726|ref|YP_223579.1| disulfide bond formation protein DsbB [Brucella abortus bv. 1 str. 9-941] gi|189022981|ref|YP_001932722.1| Frizzled protein [Brucella abortus S19] gi|254691229|ref|ZP_05154483.1| Frizzled protein [Brucella abortus bv. 6 str. 870] gi|254699016|ref|ZP_05160844.1| Frizzled protein [Brucella abortus bv. 2 str. 86/8/59] gi|254732463|ref|ZP_05191041.1| Frizzled protein [Brucella abortus bv. 4 str. 292] gi|256256416|ref|ZP_05461952.1| Frizzled protein [Brucella abortus bv. 9 str. C68] gi|297249776|ref|ZP_06933477.1| frizzled protein [Brucella abortus bv. 5 str. B3196] gi|62197919|gb|AAX76218.1| hypothetical DsbB, disulfide bond formation protein [Brucella abortus bv. 1 str. 9-941] gi|189021555|gb|ACD74276.1| Frizzled protein [Brucella abortus S19] gi|297173645|gb|EFH33009.1| frizzled protein [Brucella abortus bv. 5 str. B3196] Length = 208 Score = 75.2 bits (184), Expect = 2e-12, Method: Composition-based stats. Identities = 32/128 (25%), Positives = 52/128 (40%), Gaps = 11/128 (8%) Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLG--YSIPVFGMHLYT 59 + G + L G R I +L AI II+ RQ L+ I P VFG+H+ Sbjct: 68 VCFGVMLQLRYGPSFRFSGIGLLFAIVLLIISVRQTLLDIYPRPGHEYIGSTVFGLHMPV 127 Query: 60 WSLIFSLVIILFISVLMLFDTAEIKVAKSP---------VREIAIYLFVFLIFANFISTI 110 WS++ +L +I +V M+ + + I + + N S Sbjct: 128 WSILIALALIAAFAVQMMVWGGRHGQTIAQIKNHPVINGLGTILALYVLAVATINMASVF 187 Query: 111 LECGLTQC 118 ++CG+ QC Sbjct: 188 VQCGVGQC 195 >gi|256015139|ref|YP_003105148.1| disulfide bond formation protein DsbB [Brucella microti CCM 4915] gi|256059423|ref|ZP_05449625.1| Frizzled protein [Brucella neotomae 5K33] gi|256111726|ref|ZP_05452710.1| Frizzled protein [Brucella melitensis bv. 3 str. Ether] gi|294853352|ref|ZP_06794024.1| frizzled protein [Brucella sp. NVSL 07-0026] gi|255997799|gb|ACU49486.1| disulfide bond formation protein DsbB [Brucella microti CCM 4915] gi|294819007|gb|EFG36007.1| frizzled protein [Brucella sp. NVSL 07-0026] Length = 208 Score = 75.2 bits (184), Expect = 2e-12, Method: Composition-based stats. Identities = 32/128 (25%), Positives = 52/128 (40%), Gaps = 11/128 (8%) Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLG--YSIPVFGMHLYT 59 + G + L G R I +L AI II+ RQ L+ I P VFG+H+ Sbjct: 68 VCFGVMLQLRYGPSFRFSGIGLLFAIVLLIISVRQTLLDIYPRPGHEYIGSTVFGLHMPV 127 Query: 60 WSLIFSLVIILFISVLMLFDTAEIKVAKSP---------VREIAIYLFVFLIFANFISTI 110 WS++ +L +I +V M+ + + I + + N S Sbjct: 128 WSILIALALIAAFAVQMMVWGGRHGQTIAQIKNHPVINGLGTILALYVLAVATINMASVF 187 Query: 111 LECGLTQC 118 ++CG+ QC Sbjct: 188 VQCGVGQC 195 >gi|306845651|ref|ZP_07478220.1| Frizzled protein [Brucella sp. BO1] gi|306273972|gb|EFM55799.1| Frizzled protein [Brucella sp. BO1] Length = 208 Score = 75.2 bits (184), Expect = 3e-12, Method: Composition-based stats. Identities = 33/128 (25%), Positives = 53/128 (41%), Gaps = 11/128 (8%) Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLG--YSIPVFGMHLYT 59 + G + L G R I +L AI II+ RQ L+ I P VFG+H+ Sbjct: 68 VCFGIMLQLRYGPSFRFSGIGLLFAIVLLIISVRQTLLDIYPRPGHEYIGSTVFGLHMPV 127 Query: 60 WSLIFSLVIILFISVLMLFDTAEIKVAKSP---------VREIAIYLFVFLIFANFISTI 110 WS++ +L +I +V M+ A + + I + + N S Sbjct: 128 WSILIALALIAAFAVQMMVWGGRHGQAIAQIKNYPVINGLGTILALYVLAIATINMASVF 187 Query: 111 LECGLTQC 118 ++CG+ QC Sbjct: 188 VQCGVGQC 195 >gi|261215853|ref|ZP_05930134.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya] gi|260917460|gb|EEX84321.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya] Length = 203 Score = 74.8 bits (183), Expect = 3e-12, Method: Composition-based stats. Identities = 32/128 (25%), Positives = 52/128 (40%), Gaps = 11/128 (8%) Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLG--YSIPVFGMHLYT 59 + G + L G R I +L AI II+ RQ L+ I P VFG+H+ Sbjct: 63 VCFGVMLQLRYGPSFRFSGIGLLFAIVLLIISVRQTLLDIYPRPGHEYIGSTVFGLHMPV 122 Query: 60 WSLIFSLVIILFISVLMLFDTAEIKVAKSP---------VREIAIYLFVFLIFANFISTI 110 WS++ +L +I +V M+ + + I + + N S Sbjct: 123 WSILIALALIAAFAVQMMVWGGRHGQTIAQIKNHPVINGLGTILALYVLAVATINMASVF 182 Query: 111 LECGLTQC 118 ++CG+ QC Sbjct: 183 VQCGVGQC 190 >gi|260544967|ref|ZP_05820788.1| frizzled protein [Brucella abortus NCTC 8038] gi|260756832|ref|ZP_05869180.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870] gi|260760263|ref|ZP_05872611.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292] gi|260763502|ref|ZP_05875834.1| conserved hypothetical protein [Brucella abortus bv. 2 str. 86/8/59] gi|260882648|ref|ZP_05894262.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68] gi|260098238|gb|EEW82112.1| frizzled protein [Brucella abortus NCTC 8038] gi|260670581|gb|EEX57521.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292] gi|260673923|gb|EEX60744.1| conserved hypothetical protein [Brucella abortus bv. 2 str. 86/8/59] gi|260676940|gb|EEX63761.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870] gi|260872176|gb|EEX79245.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68] Length = 203 Score = 74.8 bits (183), Expect = 3e-12, Method: Composition-based stats. Identities = 32/128 (25%), Positives = 52/128 (40%), Gaps = 11/128 (8%) Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLG--YSIPVFGMHLYT 59 + G + L G R I +L AI II+ RQ L+ I P VFG+H+ Sbjct: 63 VCFGVMLQLRYGPSFRFSGIGLLFAIVLLIISVRQTLLDIYPRPGHEYIGSTVFGLHMPV 122 Query: 60 WSLIFSLVIILFISVLMLFDTAEIKVAKSP---------VREIAIYLFVFLIFANFISTI 110 WS++ +L +I +V M+ + + I + + N S Sbjct: 123 WSILIALALIAAFAVQMMVWGGRHGQTIAQIKNHPVINGLGTILALYVLAVATINMASVF 182 Query: 111 LECGLTQC 118 ++CG+ QC Sbjct: 183 VQCGVGQC 190 >gi|148558668|ref|YP_001257372.1| putative disulfide bond formation protein DsbB [Brucella ovis ATCC 25840] gi|148369953|gb|ABQ62825.1| putative disulfide bond formation protein DsbB [Brucella ovis ATCC 25840] Length = 208 Score = 74.8 bits (183), Expect = 3e-12, Method: Composition-based stats. Identities = 32/128 (25%), Positives = 52/128 (40%), Gaps = 11/128 (8%) Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLG--YSIPVFGMHLYT 59 + G + L G R I +L AI II+ RQ L+ I P VFG+H+ Sbjct: 68 VCFGVMLQLRYGPSFRFSGIGLLFAIVLLIISVRQTLLDIYPRPGHEYIGSTVFGLHMPV 127 Query: 60 WSLIFSLVIILFISVLMLFDTAEIKVAKSP---------VREIAIYLFVFLIFANFISTI 110 WS++ +L +I +V M+ + + I + + N S Sbjct: 128 WSILIALALIAAFAVQMMVWGGRHGQTIAQIKNHPVINGLGTILALYVLAVATINMASVF 187 Query: 111 LECGLTQC 118 ++CG+ QC Sbjct: 188 VQCGVGQC 195 >gi|261323389|ref|ZP_05962586.1| conserved hypothetical protein [Brucella neotomae 5K33] gi|265993198|ref|ZP_06105755.1| conserved hypothetical protein [Brucella melitensis bv. 3 str. Ether] gi|261299369|gb|EEY02866.1| conserved hypothetical protein [Brucella neotomae 5K33] gi|262764068|gb|EEZ10100.1| conserved hypothetical protein [Brucella melitensis bv. 3 str. Ether] Length = 203 Score = 74.8 bits (183), Expect = 3e-12, Method: Composition-based stats. Identities = 32/128 (25%), Positives = 52/128 (40%), Gaps = 11/128 (8%) Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLG--YSIPVFGMHLYT 59 + G + L G R I +L AI II+ RQ L+ I P VFG+H+ Sbjct: 63 VCFGVMLQLRYGPSFRFSGIGLLFAIVLLIISVRQTLLDIYPRPGHEYIGSTVFGLHMPV 122 Query: 60 WSLIFSLVIILFISVLMLFDTAEIKVAKSP---------VREIAIYLFVFLIFANFISTI 110 WS++ +L +I +V M+ + + I + + N S Sbjct: 123 WSILIALALIAAFAVQMMVWGGRHGQTIAQIKNHPVINGLGTILALYVLAVATINMASVF 182 Query: 111 LECGLTQC 118 ++CG+ QC Sbjct: 183 VQCGVGQC 190 >gi|326410532|gb|ADZ67596.1| Frizzled protein [Brucella melitensis M28] gi|326553823|gb|ADZ88462.1| Frizzled protein [Brucella melitensis M5-90] Length = 177 Score = 74.1 bits (181), Expect = 6e-12, Method: Composition-based stats. Identities = 32/128 (25%), Positives = 52/128 (40%), Gaps = 11/128 (8%) Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLG--YSIPVFGMHLYT 59 + G + L G R I +L AI II+ RQ L+ I P VFG+H+ Sbjct: 37 VCFGVMLQLRYGPSFRFSGIGLLFAIVLLIISVRQTLLDIYPRPGHEYIGSTVFGLHMPV 96 Query: 60 WSLIFSLVIILFISVLMLFDTAEIKVAKSP---------VREIAIYLFVFLIFANFISTI 110 WS++ +L +I +V M+ + + I + + N S Sbjct: 97 WSILIALALIAAFAVQMMVWGGRHGQTIAQIKNHPVINGLGTILALYVLAVATINMASVF 156 Query: 111 LECGLTQC 118 ++CG+ QC Sbjct: 157 VQCGVGQC 164 >gi|265999159|ref|ZP_05465215.2| disulfide bond formation protein DsbB [Brucella melitensis bv. 2 str. 63/9] gi|263092468|gb|EEZ16721.1| disulfide bond formation protein DsbB [Brucella melitensis bv. 2 str. 63/9] Length = 180 Score = 74.1 bits (181), Expect = 7e-12, Method: Composition-based stats. Identities = 32/128 (25%), Positives = 52/128 (40%), Gaps = 11/128 (8%) Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLG--YSIPVFGMHLYT 59 + G + L G R I +L AI II+ RQ L+ I P VFG+H+ Sbjct: 40 VCFGVMLQLRYGPSFRFSGIGLLFAIVLLIISVRQTLLDIYPRPGHEYIGSTVFGLHMPV 99 Query: 60 WSLIFSLVIILFISVLMLFDTAEIKVAKSP---------VREIAIYLFVFLIFANFISTI 110 WS++ +L +I +V M+ + + I + + N S Sbjct: 100 WSILIALALIAAFAVQMMVWGGRHGQTIAQIKNHPVINGLGTILALYVLAVATINMASVF 159 Query: 111 LECGLTQC 118 ++CG+ QC Sbjct: 160 VQCGVGQC 167 >gi|225628802|ref|ZP_03786836.1| Frizzled protein [Brucella ceti str. Cudo] gi|254711589|ref|ZP_05173400.1| Frizzled protein [Brucella pinnipedialis B2/94] gi|254712186|ref|ZP_05173997.1| Frizzled protein [Brucella ceti M644/93/1] gi|254715256|ref|ZP_05177067.1| Frizzled protein [Brucella ceti M13/05/1] gi|256029775|ref|ZP_05443389.1| Frizzled protein [Brucella pinnipedialis M292/94/1] gi|256157948|ref|ZP_05455866.1| Frizzled protein [Brucella ceti M490/95/1] gi|256253093|ref|ZP_05458629.1| Frizzled protein [Brucella ceti B1/94] gi|260167119|ref|ZP_05753930.1| Frizzled protein [Brucella sp. F5/99] gi|261756518|ref|ZP_06000227.1| frizzled protein [Brucella sp. F5/99] gi|225616648|gb|EEH13696.1| Frizzled protein [Brucella ceti str. Cudo] gi|261736502|gb|EEY24498.1| frizzled protein [Brucella sp. F5/99] Length = 203 Score = 73.3 bits (179), Expect = 1e-11, Method: Composition-based stats. Identities = 31/128 (24%), Positives = 49/128 (38%), Gaps = 16/128 (12%) Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLG--YSIPVFGMHLYT 59 + G + L G R I +L AI II+ RQ L+ I P VFG+H+ Sbjct: 68 VCFGVMLQLRYGPSFRFSGIGLLFAIVLLIISVRQTLLDIYPRPGHEYIGSTVFGLHMPV 127 Query: 60 WSLIFSLVIILFISVLMLFDTAEIKVAKSP---------VREIAIYLFVFLIFANFISTI 110 WS++ I +V M+ + + I + + N S Sbjct: 128 WSIL-----IAAFAVQMMVWGGRHGQTIAQIKNHPVINGLGTILALYVLAVATINMASVF 182 Query: 111 LECGLTQC 118 ++CG+ QC Sbjct: 183 VQCGVGQC 190 >gi|90578768|ref|ZP_01234578.1| hypothetical protein VAS14_03663 [Vibrio angustum S14] gi|90439601|gb|EAS64782.1| hypothetical protein VAS14_03663 [Vibrio angustum S14] Length = 386 Score = 72.9 bits (178), Expect = 1e-11, Method: Composition-based stats. Identities = 19/91 (20%), Positives = 36/91 (39%), Gaps = 6/91 (6%) Query: 36 QVLIHILPGDL-GYSIPVFGMHLYTWSLIFSLVIILFISVLMLFDTAE-----IKVAKSP 89 +HI G+ + G H YTW + + +L +S+L+ F + +V Sbjct: 2 HSSVHIGQDIGQGFGGLILGAHAYTWGVFLFIANLLIMSLLIGFSNEDSLKNTTRVRWGT 61 Query: 90 VREIAIYLFVFLIFANFISTILECGLTQCFD 120 +++ Y F+ +I N I + G Sbjct: 62 FHKVSGYSFIIVISLNVIQAFTQVGPPPYIG 92 >gi|261216982|ref|ZP_05931263.1| conserved hypothetical protein [Brucella ceti M13/05/1] gi|261220196|ref|ZP_05934477.1| conserved hypothetical protein [Brucella ceti B1/94] gi|261319212|ref|ZP_05958409.1| conserved hypothetical protein [Brucella pinnipedialis B2/94] gi|261319852|ref|ZP_05959049.1| conserved hypothetical protein [Brucella ceti M644/93/1] gi|265986787|ref|ZP_06099344.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1] gi|265996457|ref|ZP_06109014.1| conserved hypothetical protein [Brucella ceti M490/95/1] gi|260918780|gb|EEX85433.1| conserved hypothetical protein [Brucella ceti B1/94] gi|260922071|gb|EEX88639.1| conserved hypothetical protein [Brucella ceti M13/05/1] gi|261292542|gb|EEX96038.1| conserved hypothetical protein [Brucella ceti M644/93/1] gi|261298435|gb|EEY01932.1| conserved hypothetical protein [Brucella pinnipedialis B2/94] gi|262550754|gb|EEZ06915.1| conserved hypothetical protein [Brucella ceti M490/95/1] gi|264658984|gb|EEZ29245.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1] Length = 198 Score = 72.5 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 31/128 (24%), Positives = 49/128 (38%), Gaps = 16/128 (12%) Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLG--YSIPVFGMHLYT 59 + G + L G R I +L AI II+ RQ L+ I P VFG+H+ Sbjct: 63 VCFGVMLQLRYGPSFRFSGIGLLFAIVLLIISVRQTLLDIYPRPGHEYIGSTVFGLHMPV 122 Query: 60 WSLIFSLVIILFISVLMLFDTAEIKVAKSP---------VREIAIYLFVFLIFANFISTI 110 WS++ I +V M+ + + I + + N S Sbjct: 123 WSIL-----IAAFAVQMMVWGGRHGQTIAQIKNHPVINGLGTILALYVLAVATINMASVF 177 Query: 111 LECGLTQC 118 ++CG+ QC Sbjct: 178 VQCGVGQC 185 >gi|89073636|ref|ZP_01160158.1| putative ATP /GTP binding protein [Photobacterium sp. SKA34] gi|89050663|gb|EAR56149.1| putative ATP /GTP binding protein [Photobacterium sp. SKA34] Length = 382 Score = 69.4 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 19/95 (20%), Positives = 40/95 (42%), Gaps = 8/95 (8%) Query: 39 IHILPGDL-GYSIPVFGMHLYTWSLIFSLVIILFISVLMLFDTAE-----IKVAKSPVRE 92 +H+ G+ + G H YTW ++ + +L +S+L+ F + ++ + Sbjct: 1 MHLGQDIGQGFGGLILGAHAYTWGVLLFIANLLIMSLLLGFSNEDTLKNTTQIQWGNFHK 60 Query: 93 IAIYLFVFLIFANFISTILECG--LTQCFDNPTFY 125 + Y F+ +IF N I + G +P + Sbjct: 61 FSGYSFIIVIFLNVIQAFTQVGPPPYIGQGSPQSF 95 >gi|30025000|gb|AAO61477.1| unknown [Legionella pneumophila] Length = 80 Score = 67.5 bits (164), Expect = 5e-10, Method: Composition-based stats. Identities = 29/64 (45%), Positives = 42/64 (65%) Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWS 61 +G+ F+ NL+ GI+ HY +M+L + I+ RQ+ IH+ PGD GY +FG+HLYTWS Sbjct: 17 VGLCFVMNLMLGIRASHYGLMLLATLLGLSISVRQMYIHLTPGDPGYGGLIFGLHLYTWS 76 Query: 62 LIFS 65 I Sbjct: 77 AIIF 80 >gi|33595870|ref|NP_883513.1| hypothetical protein BPP1197 [Bordetella parapertussis 12822] gi|33600400|ref|NP_887960.1| hypothetical protein BB1414 [Bordetella bronchiseptica RB50] gi|33565949|emb|CAE36499.1| putative membrane protein [Bordetella parapertussis] gi|33567999|emb|CAE31912.1| putative membrane protein [Bordetella bronchiseptica RB50] Length = 159 Score = 64.8 bits (157), Expect = 4e-09, Method: Composition-based stats. Identities = 20/107 (18%), Positives = 43/107 (40%), Gaps = 12/107 (11%) Query: 9 NLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSLIFSLVI 68 N+ G HY++++ A+ A Q+L P + P G W+ + + Sbjct: 61 NVRMGPSPLHYAMVLAPALGGLAAAGWQLL---SPEAGAAAPPWQG-----WAFLLFGAM 112 Query: 69 ILFISVLMLFDTAEIKVAKSP----VREIAIYLFVFLIFANFISTIL 111 +++ ++++ D A + + LF+ + AN T+L Sbjct: 113 LVYCTLMLAADRKWGDNALKKPVALPGALVMGLFLVAVLANAAGTVL 159 >gi|17989236|ref|NP_541869.1| disulfide bond formation protein B [Brucella melitensis bv. 1 str. 16M] gi|256043270|ref|ZP_05446207.1| disulfide bond formation protein B [Brucella melitensis bv. 1 str. Rev.1] gi|260564479|ref|ZP_05834964.1| frizzled protein [Brucella melitensis bv. 1 str. 16M] gi|265989697|ref|ZP_06102254.1| disulfide bond formation protein DsbB [Brucella melitensis bv. 1 str. Rev.1] gi|17985096|gb|AAL54133.1| disulfide bond formation protein b [Brucella melitensis bv. 1 str. 16M] gi|260152122|gb|EEW87215.1| frizzled protein [Brucella melitensis bv. 1 str. 16M] gi|263000366|gb|EEZ13056.1| disulfide bond formation protein DsbB [Brucella melitensis bv. 1 str. Rev.1] Length = 242 Score = 62.1 bits (150), Expect = 2e-08, Method: Composition-based stats. Identities = 26/102 (25%), Positives = 45/102 (44%), Gaps = 2/102 (1%) Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLG--YSIPVFGMHLYT 59 + G + L G R I +L AI II+ RQ L+ I P VFG+H+ Sbjct: 68 VCFGVMLQLRYGPSFRFSGIGLLFAIVLLIISVRQTLLDIYPRPGHEYIGSTVFGLHMPV 127 Query: 60 WSLIFSLVIILFISVLMLFDTAEIKVAKSPVREIAIYLFVFL 101 WS++ +L +I +V M+ + ++ + + + L Sbjct: 128 WSILIALALIAAFAVQMMVWGGRHGQTIAQIKNLRSSMVLAL 169 >gi|312881155|ref|ZP_07740953.1| hypothetical protein VIBC2010_08138 [Vibrio caribbenthicus ATCC BAA-2122] gi|309371047|gb|EFP98501.1| hypothetical protein VIBC2010_08138 [Vibrio caribbenthicus ATCC BAA-2122] Length = 90 Score = 57.1 bits (137), Expect = 8e-07, Method: Composition-based stats. Identities = 18/43 (41%), Positives = 28/43 (65%) Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILP 43 M+ GFL N+ G QRHY +++LGA+ A RQ+ +H++P Sbjct: 48 MVMFGFLLNVKYGPTQRHYGVILLGALFGAATALRQISLHVIP 90 >gi|254706112|ref|ZP_05167940.1| disulfide bond formation protein DsbB [Brucella pinnipedialis M163/99/10] Length = 130 Score = 53.7 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 2/63 (3%) Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLG--YSIPVFGMHLYT 59 + G + L G R I +L AI II+ RQ L+ I P VFG+H+ Sbjct: 68 VCFGVMLQLRYGPSFRFSGIGLLFAIVLLIISVRQTLLDIYPRPGHEYIGSTVFGLHMPV 127 Query: 60 WSL 62 WS+ Sbjct: 128 WSI 130 >gi|207091994|ref|ZP_03239781.1| hypothetical protein HpylHP_02818 [Helicobacter pylori HPKX_438_AG0C1] Length = 375 Score = 43.3 bits (101), Expect = 0.011, Method: Composition-based stats. Identities = 7/48 (14%), Positives = 19/48 (39%), Gaps = 2/48 (4%) Query: 82 EIKVAKSPVREIAIYLFVFLIFANFISTILECGLTQCFD--NPTFYQL 127 + + +++ A Y+F ++ +N I + G +P + Sbjct: 21 FKDYSLNTLQKSAFYVFFIVVGSNAIQAFVSTGPFPYIGQSDPVRFSW 68 >gi|207092821|ref|ZP_03240608.1| hypothetical protein HpylHP_08243 [Helicobacter pylori HPKX_438_AG0C1] Length = 98 Score = 39.4 bits (91), Expect = 0.18, Method: Composition-based stats. Identities = 9/46 (19%), Positives = 19/46 (41%) Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDL 46 +IG L + G K ++ ++++L A + + H L Sbjct: 51 LIGAVALLVVRFGFKPKYIALLLLMASSGLYESFYHTGSHALEDVG 96 >gi|229496141|ref|ZP_04389861.1| putative membrane protein [Porphyromonas endodontalis ATCC 35406] gi|229316719|gb|EEN82632.1| putative membrane protein [Porphyromonas endodontalis ATCC 35406] Length = 476 Score = 36.7 bits (84), Expect = 1.1, Method: Composition-based stats. Identities = 23/113 (20%), Positives = 39/113 (34%), Gaps = 18/113 (15%) Query: 21 IMILGAITTCIIATRQVLIHILPG------------DLGYSIPVFGMHLYTWSLIFSLVI 68 I G I A+ + +LPG GY I + H + + L+ Sbjct: 164 IAFFGGAAGMIAASTKSKGQVLPGVAIATALMPPLCTAGYGIATWQWHFFFGAFYLFLIN 223 Query: 69 ILFISVL------MLFDTAEIKVAKSPVREIAIYLFVFLIFANFISTILECGL 115 +FI++ +L ++ + K R++ L I S L GL Sbjct: 224 SVFIALATYLMVRLLRFPKKVFLDKERGRKVHRILITIAICTILPSLYLSVGL 276 >gi|255039060|ref|YP_003089681.1| putative bifunctional cbb3-type cytochrome c oxidase subunit I/II [Dyadobacter fermentans DSM 18053] gi|254951816|gb|ACT96516.1| cytochrome c oxidase, cbb3-type, subunit I [Dyadobacter fermentans DSM 18053] Length = 701 Score = 36.7 bits (84), Expect = 1.1, Method: Composition-based stats. Identities = 18/98 (18%), Positives = 33/98 (33%), Gaps = 3/98 (3%) Query: 14 IKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSLIFSLVIILFIS 73 I+ H + +I + + + +S + H + W I I S Sbjct: 53 IRPLHTNAVIFAFVGNGFFTGLYYSVPRVLRTPIWSPALSRFHFWAWQAIILGAAI---S 109 Query: 74 VLMLFDTAEIKVAKSPVREIAIYLFVFLIFANFISTIL 111 + M F T++ +IAI + N I T + Sbjct: 110 LPMGFTTSKEYAELEWPFDIAIAVVWVSALVNIIMTTI 147 >gi|311746218|ref|ZP_07720003.1| cytochrome c oxidase, Cbb3-type, subunit I/II [Algoriphagus sp. PR1] gi|126576448|gb|EAZ80726.1| cytochrome c oxidase, Cbb3-type, subunit I/II [Algoriphagus sp. PR1] Length = 710 Score = 36.3 bits (83), Expect = 1.3, Method: Composition-based stats. Identities = 21/98 (21%), Positives = 37/98 (37%), Gaps = 3/98 (3%) Query: 14 IKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSLIFSLVIILFIS 73 I+ H + +I + I A + L ++ + H Y W LI I + Sbjct: 58 IRPLHTNAVIFAFVGNAIFAGVYYSMPRLLKTPMWNKTLSWFHFYGWQLIILAAAI---T 114 Query: 74 VLMLFDTAEIKVAKSPVREIAIYLFVFLIFANFISTIL 111 + + T++ +IAI L AN I T++ Sbjct: 115 LPLGLTTSKEYAELEWPIDIAIALVWVAFGANMIGTLI 152 >gi|321472581|gb|EFX83550.1| hypothetical protein DAPPUDRAFT_315330 [Daphnia pulex] Length = 393 Score = 35.9 bits (82), Expect = 1.6, Method: Composition-based stats. Identities = 14/56 (25%), Positives = 26/56 (46%), Gaps = 1/56 (1%) Query: 52 VFGMHLYTWSLIFSLVIILFISVLMLFDTAEIKVAKSPVREIAIYLFVFLIFANFI 107 + G + W L + I+ I+VL+ + A+ VR +A+ L + + NF Sbjct: 330 LLGHIINGWILFLFALSIILIAVLLFL-NYDEGNARPWVRRLALALLIISVITNFF 384 >gi|300313812|ref|YP_003777904.1| hypothetical protein Hsero_4530 [Herbaspirillum seropedicae SmR1] gi|300076597|gb|ADJ65996.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1] Length = 195 Score = 35.9 bits (82), Expect = 2.0, Method: Composition-based stats. Identities = 28/133 (21%), Positives = 57/133 (42%), Gaps = 22/133 (16%) Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60 + G+GF+ NL G+K HY + +LGA+ T +IA RQ+ + + + + + Sbjct: 59 LTGMGFMKNLCQGVKSAHYGVALLGALLTGLIALRQLWMQPV-------AAMLSQPVCLF 111 Query: 61 SLIFSLVIILFISVLM---------------LFDTAEIKVAKSPVREIAIYLFVFLIFAN 105 + +F+LV I+ I+ L+ + + K R + +F+ + Sbjct: 112 AALFALVAIIVIACLLGVKSAEYPGTLLLLQTAEATDEKHGVPWGRILVCAVFIATVAVT 171 Query: 106 FISTILECGLTQC 118 +++ C C Sbjct: 172 LSGSMINCTSATC 184 >gi|150021419|ref|YP_001306773.1| permease YjgP/YjgQ family protein [Thermosipho melanesiensis BI429] gi|149793940|gb|ABR31388.1| permease YjgP/YjgQ family protein [Thermosipho melanesiensis BI429] Length = 1096 Score = 35.5 bits (81), Expect = 2.6, Method: Composition-based stats. Identities = 19/106 (17%), Positives = 38/106 (35%), Gaps = 9/106 (8%) Query: 4 IGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILP-GDLGYSIPVFGMHLYTWSL 62 +G +L+ G+K + +S++ AI I G PV Sbjct: 287 LGVPLSLLFGLKSKSWSVIFTFAIVILYQG---SGAWISAMGKENLLNPVLAAWFPNLVF 343 Query: 63 IFSLVIILFISVLMLFDTAEIKVAKSPVREIAIYLFVFLIFANFIS 108 I + + + ++ DT + + + I +F+ +I N S Sbjct: 344 IS-----VGLFLFLMLDTPFAYKLRELLSKFMIVIFLIVISTNVFS 384 >gi|146300630|ref|YP_001195221.1| sulfatase [Flavobacterium johnsoniae UW101] gi|146155048|gb|ABQ05902.1| sulfatase [Flavobacterium johnsoniae UW101] Length = 712 Score = 35.5 bits (81), Expect = 2.7, Method: Composition-based stats. Identities = 16/106 (15%), Positives = 36/106 (33%), Gaps = 13/106 (12%) Query: 6 FLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSLIFS 65 F+ N + + +L A+ + + + + Y + + ++ Sbjct: 71 FVSNSKYNKPSGYIILGLLTALFLYVASGKSIFDE-------YGGALPRI------ILIF 117 Query: 66 LVIILFISVLMLFDTAEIKVAKSPVREIAIYLFVFLIFANFISTIL 111 + I + L LF + + I+L+V LI N +S Sbjct: 118 IGIKTALFALFLFLPKWKNKIRFWLFSFVIFLYVLLILQNGLSEFF 163 >gi|325685443|gb|EGD27542.1| membrane protein [Lactobacillus delbrueckii subsp. lactis DSM 20072] Length = 1297 Score = 35.2 bits (80), Expect = 3.2, Method: Composition-based stats. Identities = 19/107 (17%), Positives = 48/107 (44%), Gaps = 5/107 (4%) Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWS 61 +GI + S ++ + ILG + I++ + ++ G +G S + + +T+ Sbjct: 1128 VGIALILITRSLLQPIY----ILGTLLLAYISSLSITRWVVSGVMGRSTLAWNVPFFTFI 1183 Query: 62 LIFSLVIILFISVLMLF-DTAEIKVAKSPVREIAIYLFVFLIFANFI 107 ++ +L + I V+M + D+ + + + + + +I A I Sbjct: 1184 MLIALGVDYSIFVMMRYRDSDPHALPSARILKACTAIGTVVISAVVI 1230 >gi|313124478|ref|YP_004034737.1| rnd superfamily resistance-nodulation-cell division:proton (h+) antiporter [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|312281041|gb|ADQ61760.1| RND superfamily resistance-nodulation-cell division:proton (H+) antiporter [Lactobacillus delbrueckii subsp. bulgaricus ND02] Length = 1297 Score = 35.2 bits (80), Expect = 3.2, Method: Composition-based stats. Identities = 19/107 (17%), Positives = 48/107 (44%), Gaps = 5/107 (4%) Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWS 61 +GI + S ++ + ILG + I++ + ++ G +G S + + +T+ Sbjct: 1128 VGIALILITRSLLQPIY----ILGTLLLAYISSLSITRWVVSGVMGRSTLAWNVPFFTFI 1183 Query: 62 LIFSLVIILFISVLMLF-DTAEIKVAKSPVREIAIYLFVFLIFANFI 107 ++ +L + I V+M + D+ + + + + + +I A I Sbjct: 1184 MLIALGVDYSIFVMMRYRDSDPHALPSARILKACTAIGTVVISAVVI 1230 >gi|58337744|ref|YP_194329.1| PTS enzyme IIABC [Lactobacillus acidophilus NCFM] gi|227904393|ref|ZP_04022198.1| protein-N(pi)-phosphohistidine--sugar phosphotransferase [Lactobacillus acidophilus ATCC 4796] gi|58255061|gb|AAV43298.1| PTS enzyme IIABC [Lactobacillus acidophilus NCFM] gi|227867845|gb|EEJ75266.1| protein-N(pi)-phosphohistidine--sugar phosphotransferase [Lactobacillus acidophilus ATCC 4796] Length = 734 Score = 34.8 bits (79), Expect = 4.0, Method: Composition-based stats. Identities = 14/87 (16%), Positives = 40/87 (45%), Gaps = 5/87 (5%) Query: 14 IKQRHYSIMILGAITTCIIATR-QVLIHILPGDLGYSIPVF----GMHLYTWSLIFSLVI 68 ++ ++ +G+ IA ++ +PG + IP F G+++ + + SL++ Sbjct: 476 PHKKAFAFASVGSAFGGAIAAACHAGMYTMPGGGIFGIPAFINPKGINMQFYGFLISLLV 535 Query: 69 ILFISVLMLFDTAEIKVAKSPVREIAI 95 + +S ++ + V +P ++ + Sbjct: 536 AIVVSFVLTMIFGDTVVPSAPKAKVQV 562 >gi|317051654|ref|YP_004112770.1| hypothetical protein Selin_1480 [Desulfurispirillum indicum S5] gi|316946738|gb|ADU66214.1| hypothetical protein Selin_1480 [Desulfurispirillum indicum S5] Length = 1041 Score = 34.8 bits (79), Expect = 4.5, Method: Composition-based stats. Identities = 16/72 (22%), Positives = 27/72 (37%), Gaps = 2/72 (2%) Query: 26 AITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSLIFSLVIILFISVLMLFDTAEIKV 85 A+ + A VL+ +L + G+ +Y W IF I I+ + D A Sbjct: 342 AMFAIVGAMSCVLM-LLWPTPVFGKAFAGI-IYLWGFIFFWAIGDAIAHKIAVDRAFDLY 399 Query: 86 AKSPVREIAIYL 97 A+ I + Sbjct: 400 AELRATGGTIGI 411 >gi|297726469|ref|NP_001175598.1| Os08g0441200 [Oryza sativa Japonica Group] gi|42408696|dbj|BAD09915.1| unknown protein [Oryza sativa Japonica Group] gi|42408698|dbj|BAD09917.1| unknown protein [Oryza sativa Japonica Group] gi|255678479|dbj|BAH94326.1| Os08g0441200 [Oryza sativa Japonica Group] Length = 64 Score = 34.4 bits (78), Expect = 4.8, Method: Composition-based stats. Identities = 14/62 (22%), Positives = 21/62 (33%), Gaps = 5/62 (8%) Query: 6 FLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILP-----GDLGYSIPVFGMHLYTW 60 L G K R L ++ + + + G G+ FGM YTW Sbjct: 2 LLLLQRGGDKARQRGTSSLSCTAGLGVSPIRAMSSLTEDKEEEGGDGFGDSYFGMSYYTW 61 Query: 61 SL 62 +L Sbjct: 62 AL 63 >gi|300811771|ref|ZP_07092244.1| MMPL family protein [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|300497270|gb|EFK32319.1| MMPL family protein [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] Length = 1407 Score = 34.4 bits (78), Expect = 5.1, Method: Composition-based stats. Identities = 21/110 (19%), Positives = 50/110 (45%), Gaps = 7/110 (6%) Query: 1 MIGIGFLFNL--ISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLY 58 +IG+G L S ++ + ILG + I++ + ++ G +G S + + + Sbjct: 1235 LIGVGIALILVTRSLLQPIY----ILGTLLLAYISSLSITRWVVSGVMGRSTLAWNVPFF 1290 Query: 59 TWSLIFSLVIILFISVLMLF-DTAEIKVAKSPVREIAIYLFVFLIFANFI 107 T+ ++ +L + I V+M + D+ + + + + + +I A I Sbjct: 1291 TFIMLIALGVDYSIFVMMRYRDSDPHALPSARILKACTAIGTVVISAVVI 1340 >gi|305664931|ref|YP_003861218.1| beta-hexosaminidase [Maribacter sp. HTCC2170] gi|88707761|gb|EAR00001.1| beta-hexosaminidase precursor [Maribacter sp. HTCC2170] Length = 687 Score = 34.4 bits (78), Expect = 5.2, Method: Composition-based stats. Identities = 19/106 (17%), Positives = 38/106 (35%), Gaps = 8/106 (7%) Query: 1 MIGIGFLFNLISGIKQRHYS--IMILGAITTCIIATRQVLIHILPG-DLGYSIPVFGMHL 57 ++ IGF+ L+ K + I+++ + I + + L G D Y + H Sbjct: 22 ILAIGFILELLYKKKPSETAKDIVLVVLLIGFISSLVSLGSGWLLGEDGSYDETLLFRH- 80 Query: 58 YTWSLIFSLVIILFISVLMLFDTAEIKVAKSPVREIAIYLFVFLIF 103 W + V F +L + + +A + I + L Sbjct: 81 -RWLAVAFTV---FTGLLYVLKKSTNHLAGKTYFPVFIITLILLSI 122 >gi|146300292|ref|YP_001194883.1| cytochrome c oxidase, cbb3-type, subunit I [Flavobacterium johnsoniae UW101] gi|146154710|gb|ABQ05564.1| cytochrome c oxidase, cbb3-type, subunit I [Flavobacterium johnsoniae UW101] Length = 727 Score = 34.0 bits (77), Expect = 6.1, Method: Composition-based stats. Identities = 20/103 (19%), Positives = 42/103 (40%), Gaps = 4/103 (3%) Query: 10 LISG-IKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSLIFSLVI 68 L G ++ H + +I + A + L +S + +H + W LI + Sbjct: 50 LSYGRLRPLHTNAVIFAFVGNAFFAGMYYSMQRLLKARMFSDFLSNLHFWGWQLII---V 106 Query: 69 ILFISVLMLFDTAEIKVAKSPVREIAIYLFVFLIFANFISTIL 111 I++ + + +++ +IAI L ++ N I T+L Sbjct: 107 AAAITLPLGYTSSKEYAELEWPIDIAIALIWVVMGINMIGTML 149 >gi|146298959|ref|YP_001193550.1| hypothetical protein Fjoh_1199 [Flavobacterium johnsoniae UW101] gi|146153377|gb|ABQ04231.1| protein of unknown function DUF418 [Flavobacterium johnsoniae UW101] Length = 398 Score = 34.0 bits (77), Expect = 6.6, Method: Composition-based stats. Identities = 13/73 (17%), Positives = 25/73 (34%), Gaps = 1/73 (1%) Query: 55 MHLYTWSLIFSLVIILFISVLMLFDTAEIKVAKSPVREIAIYLFVFLIFANFISTILECG 114 H Y W I S +I + + +L+ ++K + R I N + + G Sbjct: 270 FHPYFW-FILSTMIFIASGLSLLYSHKKLKTVFNYFRAGGKMTLTNYIAQNILGAFIFSG 328 Query: 115 LTQCFDNPTFYQL 127 + + Y Sbjct: 329 IGLGIADTMPYWF 341 >gi|270308523|ref|YP_003330581.1| hypothetical protein DhcVS_1139 [Dehalococcoides sp. VS] gi|270154415|gb|ACZ62253.1| hypothetical protein DhcVS_1139 [Dehalococcoides sp. VS] Length = 191 Score = 34.0 bits (77), Expect = 6.8, Method: Composition-based stats. Identities = 12/54 (22%), Positives = 21/54 (38%) Query: 59 TWSLIFSLVIILFISVLMLFDTAEIKVAKSPVREIAIYLFVFLIFANFISTILE 112 +W+L+ +II+ + L + E IA+ N I+T E Sbjct: 7 SWALLAFGLIIIAGASLFILFKNEDSRKTDLEDRIALAELAIPNVVNSIATTTE 60 >gi|228474052|ref|ZP_04058793.1| arylsulfatase [Capnocytophaga gingivalis ATCC 33624] gi|228274566|gb|EEK13407.1| arylsulfatase [Capnocytophaga gingivalis ATCC 33624] Length = 709 Score = 34.0 bits (77), Expect = 7.3, Method: Composition-based stats. Identities = 21/111 (18%), Positives = 43/111 (38%), Gaps = 12/111 (10%) Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60 +I F+ N+ Q+ Y +ILGA+ + + V +I G + Sbjct: 67 VIYFLFIANVKY---QKPYGYIILGAMLLLLCYIQFVPNNIFYQYGGSVEEI-------- 115 Query: 61 SLIFSLVIILFISVLMLFDTAEIKVAKSPVREIAIYLFVFLIFANFISTIL 111 +L F L + ++ F + + + I ++++ F I N +S Sbjct: 116 ALFFFGAKTLCFAAML-FAGKWRRQVRQVLYFITLFIYTFAIVMNAVSEYF 165 >gi|303258370|ref|ZP_07344373.1| disulfide bond formation protein, DsbB family [Burkholderiales bacterium 1_1_47] gi|302858816|gb|EFL81904.1| disulfide bond formation protein, DsbB family [Burkholderiales bacterium 1_1_47] Length = 50 Score = 34.0 bits (77), Expect = 7.7, Method: Composition-based stats. Identities = 8/29 (27%), Positives = 15/29 (51%) Query: 52 VFGMHLYTWSLIFSLVIILFISVLMLFDT 80 V G+H Y W+ + +I+ + V+ F Sbjct: 2 VLGVHTYFWAEVVFWALIILLGVMFFFAP 30 >gi|257060615|ref|YP_003138503.1| pentapeptide repeat protein [Cyanothece sp. PCC 8802] gi|256590781|gb|ACV01668.1| pentapeptide repeat protein [Cyanothece sp. PCC 8802] Length = 652 Score = 33.6 bits (76), Expect = 8.5, Method: Composition-based stats. Identities = 17/95 (17%), Positives = 36/95 (37%), Gaps = 12/95 (12%) Query: 14 IKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSLIFSLVIILFIS 73 + I +L A+ I+ + + D + V +++Y S+ L + LF + Sbjct: 92 PRP----IALLIAV--SFISLVRAGL-----DHHFGAFVVALNIYF-SIALILAVALFGA 139 Query: 74 VLMLFDTAEIKVAKSPVREIAIYLFVFLIFANFIS 108 D + + + + A + +I N IS Sbjct: 140 TAAAVDEPKSSIGSTALATFACMALLIVIVVNVIS 174 >gi|332662009|ref|YP_004444797.1| cytochrome c oxidase, cbb3-type, subunit I [Haliscomenobacter hydrossis DSM 1100] gi|332330823|gb|AEE47924.1| cytochrome c oxidase, cbb3-type, subunit I [Haliscomenobacter hydrossis DSM 1100] Length = 710 Score = 33.6 bits (76), Expect = 9.6, Method: Composition-based stats. Identities = 17/98 (17%), Positives = 37/98 (37%), Gaps = 3/98 (3%) Query: 14 IKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSLIFSLVIILFIS 73 I+ H + I + I + L +S + +H + W LI ++ ++ Sbjct: 56 IRPLHTNAAIFAFVGNGIFMGVYYSLQRLLKTRMFSNTLSNIHFWGWQLII---VLAAVT 112 Query: 74 VLMLFDTAEIKVAKSPVREIAIYLFVFLIFANFISTIL 111 + + +++ +IAI L + N TI+ Sbjct: 113 LPLGITSSKEYAELEWPIDIAIALVWVVFGINMFGTII 150 Database: nr Posted date: May 22, 2011 12:22 AM Number of letters in database: 999,999,966 Number of sequences in database: 2,987,313 Database: /data/usr2/db/fasta/nr.01 Posted date: May 22, 2011 12:30 AM Number of letters in database: 999,999,796 Number of sequences in database: 2,903,041 Database: /data/usr2/db/fasta/nr.02 Posted date: May 22, 2011 12:36 AM Number of letters in database: 999,999,281 Number of sequences in database: 2,904,016 Database: /data/usr2/db/fasta/nr.03 Posted date: May 22, 2011 12:41 AM Number of letters in database: 999,999,960 Number of sequences in database: 2,935,328 Database: /data/usr2/db/fasta/nr.04 Posted date: May 22, 2011 12:46 AM Number of letters in database: 842,794,627 Number of sequences in database: 2,394,679 Lambda K H 0.319 0.161 0.517 Lambda K H 0.267 0.0494 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 1,602,215,041 Number of Sequences: 14124377 Number of extensions: 67550218 Number of successful extensions: 547645 Number of sequences better than 10.0: 1212 Number of HSP's better than 10.0 without gapping: 282 Number of HSP's successfully gapped in prelim test: 930 Number of HSP's that attempted gapping in prelim test: 546623 Number of HSP's gapped (non-prelim): 1437 length of query: 129 length of database: 4,842,793,630 effective HSP length: 95 effective length of query: 34 effective length of database: 3,500,977,815 effective search space: 119033245710 effective search space used: 119033245710 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 39 (20.6 bits) S2: 76 (33.6 bits)