RPSBLAST alignment for GI: 254780340 and conserved domain: TIGR01192
>gnl|CDD|130260 TIGR01192, chvA, glucan exporter ATP-binding protein. This model describes glucan exporter ATP binding protein in bacteria. It belongs to the larger ABC transporter superfamily with the characteristic ATP binding motif. The In general, this protein is in some ways implicated in osmoregulation and suggested to participate in the export of glucan from the cytoplasm to periplasm. The cyclic beta-1,2-glucan in the bactrerial periplasmic space is suggested to confer the property of high osmolority. It has also been demonstrated that mutants in this loci have lost functions of virulence and motility. It is unclear as to how virulence and osmoadaptaion are related. Length = 585
Score = 83.8 bits (207), Expect = 5e-17
Identities = 70/259 (27%), Positives = 122/259 (47%), Gaps = 40/259 (15%)
Query: 5 AVKFRDVDIVFGETSNKIRKRSRYSIKKHDKVSEYGMVSAVIKANLEVKKGEILVLMGLS 64
AV+FR + F +S + S E K G+ + ++G +
Sbjct: 334 AVEFRHITFEFANSSQGVFDVS-----------------------FEAKAGQTVAIVGPT 370
Query: 65 GAGKSTLLRSINGLAPVVRGEVLVDTDKGFVNPYAADANVLRKLRMHTVSMVFQQFALLP 124
GAGK+TL+ + + G++L+D ++ LRK +++ VFQ L
Sbjct: 371 GAGKTTLINLLQRVYDPTVGQILIDG----IDINTVTRESLRK----SIATVFQDAGLFN 422
Query: 125 WRTVARNVELGLEFLDIPDV-ERKSRVAEHLEIVNLTKWADCKI----NMLSGGMKQRVG 179
R++ N+ LG E +V E A H I+ + D + N LSGG +QR+
Sbjct: 423 -RSIRENIRLGREGATDEEVYEAAKAAAAHDFILKRSNGYDTLVGERGNRLSGGERQRLA 481
Query: 180 FARAFATGAPILLMDEPFSSLDPLIRMRLQDELLALQRKLKKTIVFVSHDINEAFRLGNR 239
ARA APIL++DE S+LD R+++ + AL++ +T ++H ++ R +
Sbjct: 482 IARAILKNAPILVLDEATSALDVETEARVKNAIDALRK--NRTTFIIAHRLS-TVRNADL 538
Query: 240 IAIMEGGRIIQCGTPQEII 258
+ ++ GR+I+ G+ QE+I
Sbjct: 539 VLFLDQGRLIEKGSFQELI 557