RPSBLAST alignment for GI: 254780340 and conserved domain: TIGR01257

>gnl|CDD|130324 TIGR01257, rim_protein, retinal-specific rim ABC transporter. This model describes the photoreceptor protein (rim protein) in eukaryotes. It is the member of ABC transporter superfamily. Rim protein is a membrane glycoprotein which is localized in the photoreceptor outer segment discs. Mutation/s in its genetic loci is implicated in the recessive Stargardt's disease. Length = 2272

 Score = 88.5 bits (219), Expect = 2e-18
 Identities = 71/240 (29%), Positives = 116/240 (48%), Gaps = 15/240 (6%)

Query: 30   IKKHDKVSEYGMVSAVIKANLEVKKGEILVLMGLSGAGKSTLLRSINGLAPVVRGEVLVD 89
            +K   K+ E     AV + N+   + +I   +G +GAGK+T L  + GL P   G VLV 
Sbjct: 931  VKNLVKIFEPSGRPAVDRLNITFYENQITAFLGHNGAGKTTTLSILTGLLPPTSGTVLVG 990

Query: 90   TDKGFVNPYAADANVLRKLRMHTVSMVFQQFALLPWRTVARNVELGLEFLDIPDVERKSR 149
                       + + +R+    ++ M  Q   L    TVA ++    +       E +  
Sbjct: 991  GKD-----IETNLDAVRQ----SLGMCPQHNILFHHLTVAEHILFYAQLKGRSWEEAQLE 1041

Query: 150  VAEHLEIVNLTKWADCKINMLSGGMKQRVGFARAFATGAPILLMDEPFSSLDPLIRMRLQ 209
            +   LE   L    + +   LSGGM++++  A AF   A ++++DEP S +DP  R  + 
Sbjct: 1042 MEAMLEDTGLHHKRNEEAQDLSGGMQRKLSVAIAFVGDAKVVVLDEPTSGVDPYSRRSIW 1101

Query: 210  DELLALQRKLKKTIVFVSHDINEAFRLGNRIAIMEGGRIIQCGTPQEIILHPANCYVSEF 269
            D  L L+ +  +TI+  +H ++EA  LG+RIAI+  GR+   GTP    L   NC+ + F
Sbjct: 1102 D--LLLKYRSGRTIIMSTHHMDEADLLGDRIAIISQGRLYCSGTP----LFLKNCFGTGF 1155