RPSBLAST alignment for GI: 254780340 and conserved domain: TIGR01257

>gnl|CDD|130324 TIGR01257, rim_protein, retinal-specific rim ABC transporter. This model describes the photoreceptor protein (rim protein) in eukaryotes. It is the member of ABC transporter superfamily. Rim protein is a membrane glycoprotein which is localized in the photoreceptor outer segment discs. Mutation/s in its genetic loci is implicated in the recessive Stargardt's disease. Length = 2272

 Score = 78.9 bits (194), Expect = 2e-15
 Identities = 60/221 (27%), Positives = 99/221 (44%), Gaps = 24/221 (10%)

Query: 44   AVIKANLEVKKGEILVLMGLSGAGKSTLLRSINGLAPVVRGEVLVDTDKGFVNPYAADAN 103
            AV +  + V+ GE   L+G++GAGK+T  + + G   V  G                DA 
Sbjct: 1954 AVDRLCVGVRPGECFGLLGVNGAGKTTTFKMLTGDTTVTSG----------------DAT 1997

Query: 104  VLRKLRMHTVSMVFQQFALLPWRTVARNVELGLEFL-------DIPDVERKSRVAEHLEI 156
            V  K  +  +S V Q     P      ++  G E L        +P  E +      ++ 
Sbjct: 1998 VAGKSILTNISDVHQNMGYCPQFDAIDDLLTGREHLYLYARLRGVPAEEIEKVANWSIQS 2057

Query: 157  VNLTKWADCKINMLSGGMKQRVGFARAFATGAPILLMDEPFSSLDPLIRMRLQDELLALQ 216
            + L+ +AD      SGG K+++  A A     P++L+DEP + +DP  R  L + ++++ 
Sbjct: 2058 LGLSLYADRLAGTYSGGNKRKLSTAIALIGCPPLVLLDEPTTGMDPQARRMLWNTIVSII 2117

Query: 217  RKLKKTIVFVSHDINEAFRLGNRIAIMEGGRIIQCGTPQEI 257
            R+  + +V  SH + E   L  R+AIM  G     GT Q +
Sbjct: 2118 RE-GRAVVLTSHSMEECEALCTRLAIMVKGAFQCLGTIQHL 2157