RPSBLAST alignment for GI: 254780340 and conserved domain: TIGR02203

>gnl|CDD|131258 TIGR02203, MsbA_lipidA, lipid A export permease/ATP-binding protein MsbA. This family consists of a single polypeptide chain transporter in the ATP-binding cassette (ABC) transporter family, MsbA, which exports lipid A. It may also act in multidrug resistance. Lipid A, a part of lipopolysaccharide, is found in the outer leaflet of the outer membrane of most Gram-negative bacteria. Members of this family are restricted to the Proteobacteria (although lipid A is more broadly distributed) and often are clustered with lipid A biosynthesis genes. Length = 571
 Score = 86.7 bits (215), Expect = 8e-18
 Identities = 72/223 (32%), Positives = 109/223 (48%), Gaps = 28/223 (12%)

Query: 49  NLEVKKGEILVLMGLSGAGKSTLLRSINGLAPVVRGEVLVDTDKGFVNPYAADANVLRKL 108
           +L ++ GE + L+G SG+GKSTL+  I        G++L+D          AD   L  L
Sbjct: 352 SLVIEPGETVALVGRSGSGKSTLVNLIPRFYEPDSGQILLDGHD------LADYT-LASL 404

Query: 109 RMHTVSMVFQQFALLPWRTVARNVELG-LEFLDIPDVERKSRVAEHLEIVN-LTKWADCK 166
           R   V++V Q   L    T+A N+  G  E  D  ++ER    A   + V+ L    D  
Sbjct: 405 RRQ-VALVSQDVVLFN-DTIANNIAYGRTEQADRAEIERALAAAYAQDFVDKLPLGLDTP 462

Query: 167 IN----MLSGGMKQRVGFARAFATGAPILLMDEPFSSLDPLIRMRLQDELLALQRKLKKT 222
           I     +LSGG +QR+  ARA    APIL++DE  S+LD      +Q  L  L +   +T
Sbjct: 463 IGENGVLLSGGQRQRLAIARALLKDAPILILDEATSALDNESERLVQAALERLMQ--GRT 520

Query: 223 IVFVSHDINEAFRL-----GNRIAIMEGGRIIQCGTPQEIILH 260
            + ++H      RL      +RI +M+ GRI++ GT  E++  
Sbjct: 521 TLVIAH------RLSTIEKADRIVVMDDGRIVERGTHNELLAR 557