RPSBLAST alignment for GI: 254780340 and conserved domain: TIGR03269

>gnl|CDD|132313 TIGR03269, met_CoM_red_A2, methyl coenzyme M reductase system, component A2. The enzyme that catalyzes the final step in methanogenesis, methyl coenzyme M reductase, contains alpha, beta, and gamma chains. In older literature, the complex of alpha, beta, and gamma chains was termed component C, while this single chain protein was termed methyl coenzyme M reductase system component A2. Length = 520
 Score = 81.4 bits (201), Expect = 3e-16
 Identities = 67/260 (25%), Positives = 105/260 (40%), Gaps = 34/260 (13%)

Query: 30  IKKHDKVSEYGMVSAVIKANLEVKKGEILVLMGLSGAGKSTL---LRSINGLAPV----- 81
           I+  +   ++     +   +  +++GE+L ++G SGAGKS L   LR ++   P      
Sbjct: 1   IEVKNLTKKFDGKEVLKNISFTIEEGEVLGILGRSGAGKSVLMHVLRGMDQYEPTSGRII 60

Query: 82  -----------------------VRGEVLVDTDKGFVNPYAADANVLRKLRMHTVSMVFQ 118
                                  V G  L   +  F N       + R++R     M+ +
Sbjct: 61  YHVALCEKCGYVERPSKVGEPCPVCGGTLEPEEVDFWNL---SDKLRRRIRKRIAIMLQR 117

Query: 119 QFALLPWRTVARNVELGLEFLDIPDVERKSRVAEHLEIVNLTKWADCKINMLSGGMKQRV 178
            FAL    TV  NV   LE +     E   R  + +E+V L+         LSGG KQRV
Sbjct: 118 TFALYGDDTVLDNVLEALEEIGYEGKEAVGRAVDLIEMVQLSHRITHIARDLSGGEKQRV 177

Query: 179 GFARAFATGAPILLMDEPFSSLDPLIRMRLQDELLALQRKLKKTIVFVSHDINEAFRLGN 238
             AR  A    + L DEP  +LDP     + + L    +    ++V  SH       L +
Sbjct: 178 VLARQLAKEPFLFLADEPTGTLDPQTAKLVHNALEEAVKASGISMVLTSHWPEVIEDLSD 237

Query: 239 RIAIMEGGRIIQCGTPQEII 258
           +   +E G I + GTP E++
Sbjct: 238 KAIWLENGEIKEEGTPDEVV 257