RPSBLAST alignment for GI: 254780340 and conserved domain: COG0178

>gnl|CDD|30527 COG0178, UvrA, Excinuclease ATPase subunit [DNA replication, recombination, and repair]. Length = 935

 Score = 43.6 bits (103), Expect = 9e-05
 Identities = 34/100 (34%), Positives = 48/100 (48%), Gaps = 10/100 (10%)

Query: 170 LSGGMKQRVGFARAFATGAPILL--MDEPFSSLDPLIRMRLQDELLALQRKLKKTIVFVS 227
           LSGG  QR+  A    +G   +L  +DEP   L      RL + L  L R L  T++ V 
Sbjct: 482 LSGGEAQRIRLATQIGSGLTGVLYVLDEPSIGLHQRDNERLIETLKRL-RDLGNTVIVVE 540

Query: 228 HDINEAFRLGNRI------AIMEGGRIIQCGTPQEIILHP 261
           HD  +  R  + I      A   GG I+  GTP+E++ +P
Sbjct: 541 HD-EDTIRAADHIIDIGPGAGEHGGEIVAEGTPEELLANP 579