RPSBLAST alignment for GI: 254780340 and conserved domain: cd03223
>gnl|CDD|72982 cd03223, ABCD_peroxisomal_ALDP, Peroxisomal ATP-binding cassette transporter (Pat) is involved in the import of very long-chain fatty acids (VLCFA) into the peroxisome. The peroxisomal membrane forms a permeability barrier for a wide variety of metabolites required for and formed during fatty acid beta-oxidation. To communicate with the cytoplasm and mitochondria, peroxisomes need dedicated proteins to transport such hydrophilic molecules across their membranes. X-linked adrenoleukodystrophy (X-ALD) is caused by mutations in the ALD gene, which encodes ALDP (adrenoleukodystrophy protein ), a peroxisomal integral membrane protein that is a member of the ATP-binding cassette (ABC) transporter protein family. The disease is characterized by a striking and unpredictable variation in phenotypic expression. Phenotypes include the rapidly progressive childhood cerebral form (CCALD), the milder adult form, adrenomyeloneuropathy (AMN), and variants without neurologic involvement (i.e. asymptomatic).. Length = 166
Score = 68.6 bits (168), Expect = 2e-12
Identities = 44/188 (23%), Positives = 70/188 (37%), Gaps = 62/188 (32%)
Query: 45 VIKANLEVKKGEILVLMGLSGAGKSTLLRSINGLAPVVRGEVLVDTDKG--FV--NPYAA 100
+ + E+K G+ L++ G SG GKS+L R++ GL P G + + + F+ PY
Sbjct: 17 LKDLSFEIKPGDRLLITGPSGTGKSSLFRALAGLWPWGSGRIGMPEGEDLLFLPQRPYLP 76
Query: 101 DANVLRKLRMHTVSMVFQQFALLPWRTVARNVELGLEFLDIPDVERKSRVAEHLEIVNLT 160
+ +L + PW V
Sbjct: 77 LGTLREQL-------------IYPWDDV-------------------------------- 91
Query: 161 KWADCKINMLSGGMKQRVGFARAFATGAPILLMDEPFSSLDPLIRMRLQDELLALQRKLK 220
LSGG +QR+ FAR + +DE S+LD +D L L ++L
Sbjct: 92 ---------LSGGEQQRLAFARLLLHKPKFVFLDEATSALDE----ESEDRLYQLLKELG 138
Query: 221 KTIVFVSH 228
T++ V H
Sbjct: 139 ITVISVGH 146