RPSBLAST alignment for GI: 254780340 and conserved domain: cd03233
>gnl|CDD|72992 cd03233, ABC_PDR_domain1, The pleiotropic drug resistance (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.. Length = 202
Score = 59.8 bits (145), Expect = 1e-09
Identities = 44/206 (21%), Positives = 78/206 (37%), Gaps = 44/206 (21%)
Query: 52 VKKGEILVLMGLSGAGKSTLLRSINGLAPV---VRGEVLVDTDKGFVNPYAADANVLRKL 108
VK GE+++++G G+G STLL+++ V G++ + PY A
Sbjct: 30 VKPGEMVLVLGRPGSGCSTLLKALANRTEGNVSVEGDIHYNG-----IPYKEFAEKYP-- 82
Query: 109 RMHTVSMVFQQFALLPWRTVARNVELGLEFLDIPDVERKSRVAEHLEIVNLTKWADCKIN 168
+ V ++ P TV ++ L CK N
Sbjct: 83 --GEIIYVSEEDVHFPTLTVRETLDFALR---------------------------CKGN 113
Query: 169 M----LSGGMKQRVGFARAFATGAPILLMDEPFSSLDPLIRMRLQDELLALQRKLKKTIV 224
+SGG ++RV A A + A +L D LD + + + + LK T
Sbjct: 114 EFVRGISGGERKRVSIAEALVSRASVLCWDNSTRGLDSSTALEILKCIRTMADVLKTTTF 173
Query: 225 F-VSHDINEAFRLGNRIAIMEGGRII 249
+ +E + L +++ ++ GR I
Sbjct: 174 VSLYQASDEIYDLFDKVLVLYEGRQI 199