RPSBLAST alignment for GI: 254780340 and conserved domain: cd03237

>gnl|CDD|72996 cd03237, ABC_RNaseL_inhibitor_domain2, The ATPase domain 2 of RNase L inhibitor. The ABC ATPase, RNase L inhibitor (RLI), is a key enzyme in ribosomal biogenesis, formation of translation preinitiation complexes, and assembly of HIV capsids. RLI's are not transport proteins and thus cluster with a group of soluble proteins that lack the transmembrane components commonly found in other members of the family. Structurally, RLI's have an N-terminal Fe-S domain and two nucleotide-binding domains which are arranged to form two composite active sites in their interface cleft. RLI is one of the most conserved enzymes between archaea and eukaryotes with a sequence identity of more than 48%. The high degree of evolutionary conservation suggests that RLI performs a central role in archaeal and eukaryotic physiology.. Length = 246

 Score = 58.0 bits (140), Expect = 3e-09
 Identities = 47/195 (24%), Positives = 85/195 (43%), Gaps = 24/195 (12%)

Query: 51  EVKKGEILVLMGLSGAGKSTLLRSINGLAPVVRGEVLVDTDKGFVNPYAADANVLRKLRM 110
            + + E++ ++G +G GK+T ++ + G+     G++ ++ D     P    A+    +R 
Sbjct: 21  SISESEVIGILGPNGIGKTTFIKMLAGVLKPDEGDIEIELDTVSYKPQYIKADYEGTVR- 79

Query: 111 HTVSMVFQQFALLPWRTVARNVELGLEFLDIPDVERKSRVAEHLEIVNLTKWADCKINML 170
                      LL   ++ ++      F        K+ +A+ L+I  +    D ++  L
Sbjct: 80  ----------DLL--SSITKDFYTHPYF--------KTEIAKPLQIEQIL---DREVPEL 116

Query: 171 SGGMKQRVGFARAFATGAPILLMDEPFSSLDPLIRMRLQDELLALQRKLKKTIVFVSHDI 230
           SGG  QRV  A   +  A I L+DEP + LD   R+     +       +KT   V HDI
Sbjct: 117 SGGELQRVAIAACLSKDADIYLLDEPSAYLDVEQRLMASKVIRRFAENNEKTAFVVEHDI 176

Query: 231 NEAFRLGNRIAIMEG 245
                L +R+ + EG
Sbjct: 177 IMIDYLADRLIVFEG 191