HHsearch alignment for GI: 254780341 and conserved domain: COG4135

Probab=98.41  E-value=3.6e-05  Score=49.61  Aligned_cols=141  Identities=13%  Similarity=0.200  Sum_probs=88.8

Q ss_pred             HHHHHHHHHHHHHHHCCCCHHHHHCCCHHHHHHHHCCCCC--HHHHH-HHHCCC--CHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             9978876667764210121123202350345442012021--01100-000021--017889999998878999995887
Q gi|254780341|r  103 STFISMFIGVPLGVLAAWYPRFYSIIRLFLDSMQTIPTFV--YLIPA-LVLFGL--GMVPGIVATIVFSIPTSVRLTRLG  177 (281)
Q Consensus       103 ~~~ia~~igiplGi~~~~~~~~~~~~~p~l~~~~~iP~~v--~l~p~-i~~fG~--g~~~~i~a~~i~~~~pi~~~t~~g  177 (281)
T Consensus       360 asslALll~iL~le~~~~~qR~~~~~~l~LP~L--lP~lslvfG~qvL~L~~~l~~~w~~Vvw~H~~fv~P~v~l~Ls~p  437 (551)
T COG4135         360 ASSLALLLLILWLEWGGIPQRRQAYLWLWLPIL--LPALSLVFGQQVLALWLGLDGSWTAVVWGHLLFVMPWVLLILSPP  437 (551)
T ss_pred             HCHHHHHHHHHHHHHCCCCHHCCHHHHHHHHHH--HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCH
T ss_conf             045999999999995798320110688888887--667789988999999962687439999999999999999984745


Q ss_pred             HHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
Q ss_conf             41299899999996078820101223688626799999999999999999999997058804999999
Q gi|254780341|r  178 IISTPPILKEAACAFGATPFQVFRKVELPFAIPQIVASLTQTIMLSLSMVVVTALVGSNGLGVPVLRA  245 (281)
Q Consensus       178 l~~v~~~~~eaa~~~Gas~~q~l~~V~lP~a~P~i~~Gi~~~~~~~l~~vvia~~ig~~GLG~~i~~a  245 (281)
T Consensus       438 Wq~~dsrf~kIA~~lGks~~~Iff~vklPLlfra~L~A~AVGfaVsiaqYlPTL~lG~GRltTiTTEA  505 (551)
T COG4135         438 WQRIDSRFIKIAQTLGKSRAKIFFYVKLPLLFRACLIAFAVGFSVSIAQYLPTLWLGAGRLTTITTEA  505 (551)
T ss_pred             HHHHCHHHHHHHHHHCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHH
T ss_conf             75527089999987083066788875045767999999998767429976147822677664111345